RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W CTF8P38877 133 aa4.48□□□□□ -1.69
VPS17YOR132W ATP25Q03153 612 aa4.48□□□□□ -1.69
VPS17YOR132W NTO1Q12311 748 aa4.48□□□□□ -1.69
VPS17YOR132W YOR1P53049 1477 aa4.47□□□□□ -1.69
VPS17YOR132W RKR1Q04781 1562 aa4.47□□□□□ -1.69
VPS17YOR132W CIT2P08679 460 aa4.47□□□□□ -1.69
VPS17YOR132W CAD1P24813 409 aaKnown RBP4.47□□□□□ -1.69
VPS17YOR132W NUG1P40010 520 aaKnown RBP4.47□□□□□ -1.69
VPS17YOR132W PHO23P50947 330 aa4.47□□□□□ -1.69
VPS17YOR132W TAD1P53065 400 aa4.47□□□□□ -1.69
VPS17YOR132W MET7Q08645 548 aa4.47□□□□□ -1.69
VPS17YOR132W MDS3P53094 1487 aa4.47□□□□□ -1.69
VPS17YOR132W TUB2P02557 457 aaKnown RBP4.46□□□□□ -1.7
VPS17YOR132W PHO8P11491 566 aa4.46□□□□□ -1.7
VPS17YOR132W SAP190P36123 1033 aa4.46□□□□□ -1.7
VPS17YOR132W GSF2Q04697 403 aaKnown RBP4.46□□□□□ -1.7
VPS17YOR132W SWM1Q12379 170 aa4.46□□□□□ -1.7
VPS17YOR132W RPO31P04051 1460 aa4.45□□□□□ -1.7
VPS17YOR132W PRC1P00729 532 aa4.45□□□□□ -1.7
VPS17YOR132W YHR078WP38799 552 aa4.45□□□□□ -1.7
VPS17YOR132W DUS1P53759 423 aaKnown RBP4.45□□□□□ -1.7
VPS17YOR132W LRS4Q04087 347 aaKnown RBP4.45□□□□□ -1.7
VPS17YOR132W HAL9Q12180 1030 aa4.45□□□□□ -1.7
VPS17YOR132W YOR022CQ12204 715 aa4.45□□□□□ -1.7
VPS17YOR132W TRM732Q03496 1420 aa4.45□□□□□ -1.7
VPS17YOR132W YCL002CP25565 263 aa4.45□□□□□ -1.7
VPS17YOR132W PMI40P29952 429 aaKnown RBP4.45□□□□□ -1.7
VPS17YOR132W SEC21P32074 935 aaKnown RBP4.45□□□□□ -1.7
VPS17YOR132W SWE1P32944 819 aa4.45□□□□□ -1.7
VPS17YOR132W YJR008WP47085 338 aa4.45□□□□□ -1.7
VPS17YOR132W ZDS1P50111 915 aaKnown RBP4.45□□□□□ -1.7
VPS17YOR132W YRB30P53107 440 aaPredicted RBP4.45□□□□□ -1.7
VPS17YOR132W RTS3P53289 263 aa4.45□□□□□ -1.7
VPS17YOR132W PEX19Q07418 342 aa4.45□□□□□ -1.7
VPS17YOR132W MYO4P32492 1471 aa4.44□□□□□ -1.7
VPS17YOR132W UFD4P33202 1483 aa4.44□□□□□ -1.7
VPS17YOR132W THI4P32318 326 aa4.44□□□□□ -1.7
VPS17YOR132W DEF1P35732 738 aaKnown RBP4.44□□□□□ -1.7
VPS17YOR132W NMD2P38798 1089 aaKnown RBP4.44□□□□□ -1.7
VPS17YOR132W SET5P38890 526 aaKnown RBP4.44□□□□□ -1.7
VPS17YOR132W MAL11P53048 616 aa4.44□□□□□ -1.7
VPS17YOR132W RSC3Q06639 885 aa4.44□□□□□ -1.7
VPS17YOR132W AIM39Q08223 395 aa4.44□□□□□ -1.7
VPS17YOR132W TOP2P06786 1428 aaKnown RBP4.43□□□□□ -1.7
VPS17YOR132W RLP7P40693 322 aaKnown RBP4.43□□□□□ -1.7
VPS17YOR132W SHR5P41912 237 aa4.43□□□□□ -1.7
VPS17YOR132W SLU7Q02775 382 aaKnown RBP4.43□□□□□ -1.7
VPS17YOR132W LAS17Q12446 633 aa4.43□□□□□ -1.7
VPS17YOR132W MDM12Q92328 271 aa4.43□□□□□ -1.7
VPS17YOR132W YCF1P39109 1515 aaKnown RBP4.43□□□□□ -1.7
VPS17YOR132W GSY1P23337 708 aa4.42□□□□□ -1.7
VPS17YOR132W PER1P25625 357 aa4.42□□□□□ -1.7
VPS17YOR132W PZF1P39933 429 aa4.42□□□□□ -1.7
VPS17YOR132W TY4A-JP47023 414 aa4.42□□□□□ -1.7
VPS17YOR132W POB3Q04636 552 aaKnown RBP4.42□□□□□ -1.7
VPS17YOR132W THI21Q08975 551 aa4.42□□□□□ -1.7
VPS17YOR132W TRM11Q12463 433 aa4.42□□□□□ -1.7
VPS17YOR132W YBR182C-AQ8TGU6 64 aa4.42□□□□□ -1.7
VPS17YOR132W SMC4Q12267 1418 aa4.42□□□□□ -1.7
VPS17YOR132W DIF1O13577 133 aa4.41□□□□□ -1.7
VPS17YOR132W MET6P05694 767 aaKnown RBP4.41□□□□□ -1.7
VPS17YOR132W TRP4P07285 380 aaPredicted RBP4.41□□□□□ -1.7
VPS17YOR132W TUB3P09734 445 aaKnown RBP4.41□□□□□ -1.7
VPS17YOR132W MSH2P25847 964 aa4.41□□□□□ -1.7
VPS17YOR132W HRR25P29295 494 aaKnown RBP4.41□□□□□ -1.7
VPS17YOR132W NGG1P32494 702 aa4.41□□□□□ -1.7
VPS17YOR132W MTC2P34246 357 aa4.41□□□□□ -1.7
VPS17YOR132W MSS4P38994 779 aa4.41□□□□□ -1.7
VPS17YOR132W SSY5P47002 699 aa4.41□□□□□ -1.7
VPS17YOR132W ALY2P47029 1046 aa4.41□□□□□ -1.7
VPS17YOR132W MSE1P48525 536 aa4.41□□□□□ -1.7
VPS17YOR132W PUS9Q12069 462 aa4.41□□□□□ -1.7
VPS17YOR132W TY2B-LR1P0C2J3 1770 aa4.41□□□□□ -1.7
VPS17YOR132W TY2B-FP0CX63 1770 aa4.41□□□□□ -1.7
VPS17YOR132W TY2B-GR2P0CX64 1770 aa4.41□□□□□ -1.7
VPS17YOR132W TY2B-CP25384 1770 aa4.41□□□□□ -1.7
VPS17YOR132W TY2B-DR2Q03494 1770 aa4.41□□□□□ -1.7
VPS17YOR132W TY1B-DR1Q03855 1755 aa4.41□□□□□ -1.7
VPS17YOR132W TY2B-DR3Q07791 1770 aaKnown RBP4.41□□□□□ -1.7
VPS17YOR132W TY2B-OR1Q12113 1770 aa4.41□□□□□ -1.7
VPS17YOR132W TY2B-DR1Q12472 1770 aa4.41□□□□□ -1.7
VPS17YOR132W TY2B-OR2Q12501 1770 aa4.41□□□□□ -1.7
VPS17YOR132W VHR1P40522 640 aa4.41□□□□□ -1.7
VPS17YOR132W AIM21P40563 679 aa4.41□□□□□ -1.7
VPS17YOR132W RNH70P53331 553 aa4.41□□□□□ -1.7
VPS17YOR132W ASI2P53895 289 aa4.41□□□□□ -1.7
VPS17YOR132W UGO1Q03327 502 aa4.41□□□□□ -1.7
VPS17YOR132W PKH1Q03407 766 aa4.41□□□□□ -1.7
VPS17YOR132W TY1B-DR3Q99231 1755 aa4.41□□□□□ -1.7
VPS17YOR132W SNQ2P32568 1501 aaKnown RBP4.4□□□□□ -1.7
VPS17YOR132W EFT1P32324 842 aaKnown RBP4.4□□□□□ -1.71
VPS17YOR132W PEX6P33760 1030 aa4.4□□□□□ -1.71
VPS17YOR132W STO1P34160 861 aaKnown RBP4.4□□□□□ -1.71
VPS17YOR132W CTF13P35203 478 aa4.4□□□□□ -1.71
VPS17YOR132W SAK1P38990 1142 aa4.4□□□□□ -1.71
VPS17YOR132W DSS1P39112 969 aa4.4□□□□□ -1.71
VPS17YOR132W HXT16P47185 567 aa4.4□□□□□ -1.71
VPS17YOR132W SUN4P53616 420 aa4.4□□□□□ -1.71
VPS17YOR132W CDC9P04819 755 aa4.39□□□□□ -1.71
VPS17YOR132W PPG1P32838 368 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 93 ms