RNA–Protein interactions for RNA: YOR043W

WHI2, Transcript of Protein required for full activation of the general stress response, yeast

Gene WHI2, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
WHI2	YOR043W	NOP58	Q12499	511 aa	Known RBP	6.59	□□□□□ -1.36
WHI2	YOR043W	TOM70	P07213	617 aa	Known RBP	6.58	□□□□□ -1.36
WHI2	YOR043W	CHS2	P14180	963 aa		6.58	□□□□□ -1.36
WHI2	YOR043W	TFC4	P33339	1025 aa		6.58	□□□□□ -1.36
WHI2	YOR043W	KTR2	P33550	425 aa		6.58	□□□□□ -1.36
WHI2	YOR043W	YKL023W	P36103	277 aa	Known RBP	6.58	□□□□□ -1.36
WHI2	YOR043W	DBP7	P36120	742 aa	Known RBP	6.58	□□□□□ -1.36
WHI2	YOR043W	CEP3	P40969	608 aa		6.58	□□□□□ -1.36
WHI2	YOR043W	LCB2	P40970	561 aa		6.58	□□□□□ -1.36
WHI2	YOR043W	SMC3	P47037	1230 aa		6.58	□□□□□ -1.36
WHI2	YOR043W	AVT1	P47082	602 aa		6.58	□□□□□ -1.36
WHI2	YOR043W	TAD1	P53065	400 aa		6.58	□□□□□ -1.36
WHI2	YOR043W	YMR321C	Q04898	105 aa		6.58	□□□□□ -1.36
WHI2	YOR043W	YLR297W	Q05899	129 aa		6.58	□□□□□ -1.36
WHI2	YOR043W	OPY2	Q06810	360 aa		6.58	□□□□□ -1.36
WHI2	YOR043W	YPR078C	Q06813	372 aa		6.58	□□□□□ -1.36
WHI2	YOR043W	MLH2	Q07980	695 aa		6.58	□□□□□ -1.36
WHI2	YOR043W	SMC5	Q08204	1093 aa		6.58	□□□□□ -1.36
WHI2	YOR043W	MCM16	Q12262	181 aa		6.58	□□□□□ -1.36
WHI2	YOR043W	DED1	P06634	604 aa	Known RBP	6.57	□□□□□ -1.36
WHI2	YOR043W	RAD57	P25301	460 aa		6.57	□□□□□ -1.36
WHI2	YOR043W	NAM7	P30771	971 aa	Known RBP	6.57	□□□□□ -1.36
WHI2	YOR043W	JNM1	P36224	373 aa		6.57	□□□□□ -1.36
WHI2	YOR043W	MCX1	P38323	520 aa	Predicted RBP	6.57	□□□□□ -1.36
WHI2	YOR043W	NDC80	P40460	691 aa		6.57	□□□□□ -1.36
WHI2	YOR043W	TAM41	P53230	385 aa		6.57	□□□□□ -1.36
WHI2	YOR043W	TIM8	P57744	87 aa		6.57	□□□□□ -1.36
WHI2	YOR043W	ROD1	Q02805	837 aa		6.57	□□□□□ -1.36
WHI2	YOR043W	GPI13	Q07830	1017 aa		6.57	□□□□□ -1.36
WHI2	YOR043W	YLR001C	Q07895	862 aa		6.57	□□□□□ -1.36
WHI2	YOR043W	MSC6	Q08818	692 aa	Known RBP	6.57	□□□□□ -1.36
WHI2	YOR043W	PET111	P08468	800 aa		6.56	□□□□□ -1.36
WHI2	YOR043W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	6.56	□□□□□ -1.36	not detected
WHI2	YOR043W	COT1	P32798	439 aa		6.56	□□□□□ -1.36
WHI2	YOR043W	VPS35	P34110	944 aa		6.56	□□□□□ -1.36
WHI2	YOR043W	APE3	P37302	537 aa	Known RBP	6.56	□□□□□ -1.36
WHI2	YOR043W	YEL025C	P39991	1188 aa		6.56	□□□□□ -1.36
WHI2	YOR043W	EFM4	P40516	257 aa		6.56	□□□□□ -1.36
WHI2	YOR043W	MMM1	P41800	426 aa		6.56	□□□□□ -1.36
WHI2	YOR043W	SPR3	P41901	512 aa		6.56	□□□□□ -1.36
WHI2	YOR043W	COS5	P47187	383 aa		6.56	□□□□□ -1.36
WHI2	YOR043W	RPS7B	P48164	190 aa	Known RBP	6.56	□□□□□ -1.36
WHI2	YOR043W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	6.56	□□□□□ -1.36	RIP-Chip
WHI2	YOR043W	SML1	Q04964	104 aa		6.56	□□□□□ -1.36
WHI2	YOR043W	VAC14	Q06708	880 aa		6.56	□□□□□ -1.36
WHI2	YOR043W	RLP24	Q07915	199 aa	Known RBP	6.56	□□□□□ -1.36
WHI2	YOR043W	TY3A-G	Q12173	290 aa		6.56	□□□□□ -1.36
WHI2	YOR043W	TY3A-I	Q99219	290 aa		6.56	□□□□□ -1.36
WHI2	YOR043W	YUR1	P26725	428 aa		6.55	□□□□□ -1.36
WHI2	YOR043W	SRB4	P32569	687 aa		6.55	□□□□□ -1.36
WHI2	YOR043W	REI1	P38344	393 aa	Predicted RBP	6.55	□□□□□ -1.36
WHI2	YOR043W	YMR124W	P39523	943 aa	Known RBP	6.55	□□□□□ -1.36
WHI2	YOR043W	EAF5	P39995	279 aa		6.55	□□□□□ -1.36
WHI2	YOR043W	FIG4	P42837	879 aa		6.55	□□□□□ -1.36
WHI2	YOR043W	RTT102	P53330	157 aa		6.55	□□□□□ -1.36
WHI2	YOR043W	BOP3	P53958	396 aa		6.55	□□□□□ -1.36
WHI2	YOR043W	SOV1	Q04748	898 aa		6.55	□□□□□ -1.36
WHI2	YOR043W	COQ9	Q05779	260 aa		6.55	□□□□□ -1.36
WHI2	YOR043W	YLR346C	Q06139	101 aa		6.55	□□□□□ -1.36
WHI2	YOR043W	CSR1	Q06705	408 aa	Known RBP	6.55	□□□□□ -1.36
WHI2	YOR043W	SLX4	Q12098	748 aa		6.55	□□□□□ -1.36
WHI2	YOR043W	YLL058W	Q12198	575 aa		6.55	□□□□□ -1.36
WHI2	YOR043W	TRM11	Q12463	433 aa		6.55	□□□□□ -1.36
WHI2	YOR043W	IRE1	P32361	1115 aa		6.54	□□□□□ -1.36
WHI2	YOR043W	MUD1	P32605	298 aa	Known RBP	6.54	□□□□□ -1.36
WHI2	YOR043W	RSC30	P38781	883 aa		6.54	□□□□□ -1.36
WHI2	YOR043W	SDS3	P40505	327 aa		6.54	□□□□□ -1.36
WHI2	YOR043W	PRP31	P49704	494 aa	Predicted RBP	6.54	□□□□□ -1.36
WHI2	YOR043W	SCS3	P53012	380 aa		6.54	□□□□□ -1.36
WHI2	YOR043W	ATG1	P53104	897 aa		6.54	□□□□□ -1.36
WHI2	YOR043W	MDR1	P53258	950 aa		6.54	□□□□□ -1.36
WHI2	YOR043W	UTP14	Q04500	899 aa	Known RBP	6.54	□□□□□ -1.36
WHI2	YOR043W	DON1	Q05610	365 aa		6.54	□□□□□ -1.36
WHI2	YOR043W	IES4	Q08561	116 aa		6.54	□□□□□ -1.36
WHI2	YOR043W	OSW2	Q12202	724 aa		6.54	□□□□□ -1.36
WHI2	YOR043W	SRF1	Q12516	437 aa		6.54	□□□□□ -1.36
WHI2	YOR043W	STE11	P23561	717 aa		6.53	□□□□□ -1.36
WHI2	YOR043W	DPB3	P27344	201 aa		6.53	□□□□□ -1.36
WHI2	YOR043W	RGT1	P32862	1170 aa		6.53	□□□□□ -1.36
WHI2	YOR043W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	6.53	□□□□□ -1.36	not detected
WHI2	YOR043W	TCD1	P38756	429 aa		6.53	□□□□□ -1.36
WHI2	YOR043W	SET5	P38890	526 aa	Known RBP	6.53	□□□□□ -1.36
WHI2	YOR043W	VPS70	P47161	811 aa		6.53	□□□□□ -1.36
WHI2	YOR043W	HSH155	P49955	971 aa	Known RBP	6.53	□□□□□ -1.36
WHI2	YOR043W	PSP2	P50109	593 aa	Known RBP	6.53	□□□□□ -1.36
WHI2	YOR043W	VTC3	Q02725	835 aa		6.53	□□□□□ -1.36
WHI2	YOR043W	TSR1	Q07381	788 aa	Known RBP	6.53	□□□□□ -1.36
WHI2	YOR043W	CDC53	Q12018	815 aa	Known RBP	6.53	□□□□□ -1.36
WHI2	YOR043W	DAS2	Q12084	232 aa		6.53	□□□□□ -1.36
WHI2	YOR043W	TRP2	P00899	507 aa	Known RBP	6.53	□□□□□ -1.36
WHI2	YOR043W	CKI1	P20485	582 aa		6.53	□□□□□ -1.36
WHI2	YOR043W	HXT1	P32465	570 aa		6.53	□□□□□ -1.36
WHI2	YOR043W	MOT2	P34909	587 aa	Known RBP	6.53	□□□□□ -1.36
WHI2	YOR043W	SMF1	P38925	575 aa		6.53	□□□□□ -1.36
WHI2	YOR043W	ACF4	P47129	309 aa		6.53	□□□□□ -1.36
WHI2	YOR043W	YNL146W	P53906	100 aa		6.53	□□□□□ -1.36
WHI2	YOR043W	SYH1	Q02875	849 aa	Known RBP	6.53	□□□□□ -1.36
WHI2	YOR043W	NGL3	Q03210	505 aa		6.53	□□□□□ -1.36
WHI2	YOR043W	RRB1	Q04225	511 aa	Known RBP	6.53	□□□□□ -1.36
WHI2	YOR043W	SIL1	Q08199	421 aa		6.53	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 149.4 ms