RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS33	YLR396C	YDR338C	Q05497	695 aa		4.26	□□□□□ -1.73
VPS33	YLR396C	DIF1	O13577	133 aa		4.26	□□□□□ -1.73
VPS33	YLR396C	PRC1	P00729	532 aa		4.26	□□□□□ -1.73
VPS33	YLR396C	HOG1	P32485	435 aa		4.26	□□□□□ -1.73
VPS33	YLR396C	SAP190	P36123	1033 aa		4.26	□□□□□ -1.73
VPS33	YLR396C	YNR029C	P53729	429 aa	Known RBP	4.26	□□□□□ -1.73
VPS33	YLR396C	YLR224W	Q05947	369 aa		4.26	□□□□□ -1.73
VPS33	YLR396C	CHD1	P32657	1468 aa		4.25	□□□□□ -1.73
VPS33	YLR396C	MIH1	P23748	554 aa		4.25	□□□□□ -1.73
VPS33	YLR396C	SED4	P25365	1065 aa		4.25	□□□□□ -1.73
VPS33	YLR396C	TOD6	P34219	525 aa		4.25	□□□□□ -1.73
VPS33	YLR396C	MGS1	P40151	587 aa		4.25	□□□□□ -1.73
VPS33	YLR396C	COG8	Q04632	607 aa		4.25	□□□□□ -1.73
VPS33	YLR396C	SFL1	P20134	766 aa		4.25	□□□□□ -1.73
VPS33	YLR396C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
VPS33	YLR396C	CRP1	P38845	465 aa	Known RBP	4.25	□□□□□ -1.73
VPS33	YLR396C	SHR5	P41912	237 aa		4.25	□□□□□ -1.73
VPS33	YLR396C	YGL081W	P53156	320 aa		4.25	□□□□□ -1.73
VPS33	YLR396C	NPC2	Q12408	173 aa		4.25	□□□□□ -1.73
VPS33	YLR396C	KCS1	Q12494	1050 aa		4.25	□□□□□ -1.73
VPS33	YLR396C	LST4	P34239	828 aa		4.24	□□□□□ -1.73
VPS33	YLR396C	PCM1	P38628	557 aa	Known RBP	4.24	□□□□□ -1.73
VPS33	YLR396C	YHR078W	P38799	552 aa		4.24	□□□□□ -1.73
VPS33	YLR396C	RPN10	P38886	268 aa	Known RBP	4.24	□□□□□ -1.73
VPS33	YLR396C	PLB1	P39105	664 aa		4.24	□□□□□ -1.73
VPS33	YLR396C	MET13	P53128	600 aa		4.24	□□□□□ -1.73
VPS33	YLR396C	SDA1	P53313	767 aa	Known RBP	4.24	□□□□□ -1.73
VPS33	YLR396C	NHX1	Q04121	633 aa		4.24	□□□□□ -1.73
VPS33	YLR396C	HLJ1	P48353	224 aa		4.23	□□□□□ -1.73
VPS33	YLR396C	ZIP2	P53061	704 aa		4.23	□□□□□ -1.73
VPS33	YLR396C	ATG33	Q06485	197 aa		4.23	□□□□□ -1.73
VPS33	YLR396C	UBP12	P39538	1254 aa		4.23	□□□□□ -1.73
VPS33	YLR396C	SLU7	Q02775	382 aa	Known RBP	4.23	□□□□□ -1.73
VPS33	YLR396C	CRR1	Q05790	422 aa		4.23	□□□□□ -1.73
VPS33	YLR396C	THI73	Q07904	523 aa		4.23	□□□□□ -1.73
VPS33	YLR396C	GUP2	Q08929	609 aa		4.23	□□□□□ -1.73
VPS33	YLR396C	TCB3	Q03640	1545 aa	Known RBP	4.22	□□□□□ -1.73
VPS33	YLR396C	UFD4	P33202	1483 aa		4.22	□□□□□ -1.73
VPS33	YLR396C	HMG1	P12683	1054 aa		4.22	□□□□□ -1.73
VPS33	YLR396C	SEC21	P32074	935 aa	Known RBP	4.22	□□□□□ -1.73
VPS33	YLR396C	GRX4	P32642	244 aa		4.22	□□□□□ -1.73
VPS33	YLR396C	SSY5	P47002	699 aa		4.22	□□□□□ -1.73
VPS33	YLR396C	AIM14	P53109	570 aa		4.22	□□□□□ -1.73
VPS33	YLR396C	YLR358C	O13565	187 aa		4.22	□□□□□ -1.73
VPS33	YLR396C	TUB3	P09734	445 aa	Known RBP	4.22	□□□□□ -1.73
VPS33	YLR396C	HSL7	P38274	827 aa		4.22	□□□□□ -1.73
VPS33	YLR396C	BNA2	P47125	453 aa		4.22	□□□□□ -1.73
VPS33	YLR396C	PMT3	P47190	753 aa		4.22	□□□□□ -1.73
VPS33	YLR396C	GIN4	Q12263	1142 aa		4.22	□□□□□ -1.73
VPS33	YLR396C	GPR1	Q12361	961 aa		4.22	□□□□□ -1.73
VPS33	YLR396C	YLR149C	Q99296	730 aa		4.22	□□□□□ -1.73
VPS33	YLR396C	EXG2	P52911	562 aa		4.21	□□□□□ -1.74
VPS33	YLR396C	TMA10	Q06177	86 aa		4.21	□□□□□ -1.74
VPS33	YLR396C	PRP4	P20053	465 aa	Known RBP	4.2	□□□□□ -1.74
VPS33	YLR396C	STE11	P23561	717 aa		4.2	□□□□□ -1.74
VPS33	YLR396C	YKR051W	P36142	418 aa		4.2	□□□□□ -1.74
VPS33	YLR396C	ENP1	P38333	483 aa	Known RBP	4.2	□□□□□ -1.74
VPS33	YLR396C	MSS4	P38994	779 aa		4.2	□□□□□ -1.74
VPS33	YLR396C	UBC9	P50623	157 aa	Predicted RBP	4.2	□□□□□ -1.74
VPS33	YLR396C	GPG1	P53130	126 aa		4.2	□□□□□ -1.74
VPS33	YLR396C	NPY1	P53164	384 aa		4.2	□□□□□ -1.74
VPS33	YLR396C	ASI2	P53895	289 aa		4.2	□□□□□ -1.74
VPS33	YLR396C	MUS81	Q04149	632 aa	Predicted RBP	4.2	□□□□□ -1.74
VPS33	YLR396C	GUD1	Q07729	489 aa		4.2	□□□□□ -1.74
VPS33	YLR396C	Q0142	Q9ZZW4	58 aa		4.2	□□□□□ -1.74
VPS33	YLR396C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
VPS33	YLR396C	TSR4	P25040	408 aa		4.2	□□□□□ -1.74
VPS33	YLR396C	KAR4	P25583	335 aa		4.2	□□□□□ -1.74
VPS33	YLR396C	CCR4	P31384	837 aa	Known RBP	4.2	□□□□□ -1.74
VPS33	YLR396C	FLR1	P38124	548 aa		4.2	□□□□□ -1.74
VPS33	YLR396C	SAK1	P38990	1142 aa		4.2	□□□□□ -1.74
VPS33	YLR396C	VHR1	P40522	640 aa		4.2	□□□□□ -1.74
VPS33	YLR396C	UME1	Q03010	460 aa		4.2	□□□□□ -1.74
VPS33	YLR396C	PZF1	P39933	429 aa		4.19	□□□□□ -1.74
VPS33	YLR396C	UBP5	P39944	805 aa		4.19	□□□□□ -1.74
VPS33	YLR396C	DOT6	P40059	670 aa	Known RBP	4.19	□□□□□ -1.74
VPS33	YLR396C	YFL052W	P43551	465 aa		4.19	□□□□□ -1.74
VPS33	YLR396C	YGR237C	P50089	785 aa		4.19	□□□□□ -1.74
VPS33	YLR396C	CLU1	Q03690	1277 aa	Known RBP	4.19	□□□□□ -1.74
VPS33	YLR396C	SWM1	Q12379	170 aa		4.19	□□□□□ -1.74
VPS33	YLR396C	NUP145	P49687	1317 aa		4.19	□□□□□ -1.74
VPS33	YLR396C	YKR018C	P36114	725 aa		4.18	□□□□□ -1.74
VPS33	YLR396C	TYS1	P36421	394 aa	Known RBP	4.18	□□□□□ -1.74
VPS33	YLR396C	PFA3	P42836	336 aa		4.18	□□□□□ -1.74
VPS33	YLR396C	MNN10	P50108	393 aa	Known RBP	4.18	□□□□□ -1.74
VPS33	YLR396C	ASM4	Q05166	528 aa		4.18	□□□□□ -1.74
VPS33	YLR396C	RPN7	Q06103	429 aa	Known RBP	4.18	□□□□□ -1.74
VPS33	YLR396C	PEX19	Q07418	342 aa		4.18	□□□□□ -1.74
VPS33	YLR396C	LAS17	Q12446	633 aa		4.18	□□□□□ -1.74
VPS33	YLR396C	XRN1	P22147	1528 aa	Known RBP	4.18	□□□□□ -1.74
VPS33	YLR396C	CKB2	P38930	258 aa		4.18	□□□□□ -1.74
VPS33	YLR396C	YEN1	P40028	759 aa		4.18	□□□□□ -1.74
VPS33	YLR396C	YJR096W	P47137	282 aa		4.18	□□□□□ -1.74
VPS33	YLR396C	MCM6	P53091	1017 aa	Known RBP	4.18	□□□□□ -1.74
VPS33	YLR396C	MTQ2	Q03920	221 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS33	YLR396C	ENB1	Q08299	606 aa		4.18	□□□□□ -1.74
VPS33	YLR396C	DCG1	P32460	244 aa		4.17	□□□□□ -1.74
VPS33	YLR396C	MTR3	P48240	250 aa	Predicted RBP	4.17	□□□□□ -1.74
VPS33	YLR396C	ERG5	P54781	538 aa		4.17	□□□□□ -1.74
VPS33	YLR396C	PKH1	Q03407	766 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 158 ms