RNA–Protein interactions for RNA: YJR005C-A

LSO1, Transcript of Putative protein of unknown function, yeast

Gene LSO1, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSO1	YJR005C-A	SSB2	P40150	613 aa	Known RBP	4.85	□□□□□ -1.63
LSO1	YJR005C-A	SEC9	P40357	651 aa		4.85	□□□□□ -1.63
LSO1	YJR005C-A	NUP82	P40368	713 aa		4.85	□□□□□ -1.63
LSO1	YJR005C-A	NDC80	P40460	691 aa		4.85	□□□□□ -1.63
LSO1	YJR005C-A	IES1	P43579	692 aa		4.85	□□□□□ -1.63
LSO1	YJR005C-A	SUM1	P46676	1062 aa		4.85	□□□□□ -1.63
LSO1	YJR005C-A	TCB2	P48231	1178 aa		4.85	□□□□□ -1.63
LSO1	YJR005C-A	CCM1	P48237	864 aa	Predicted RBP	4.85	□□□□□ -1.63
LSO1	YJR005C-A	NBP1	P52919	319 aa	Predicted RBP	4.85	□□□□□ -1.63
LSO1	YJR005C-A	DIP5	P53388	608 aa		4.85	□□□□□ -1.63
LSO1	YJR005C-A	ALF1	P53904	254 aa		4.85	□□□□□ -1.63
LSO1	YJR005C-A	NCS2	P53923	493 aa	Predicted RBP	4.85	□□□□□ -1.63
LSO1	YJR005C-A	ALD6	P54115	500 aa	Known RBP	4.85	□□□□□ -1.63
LSO1	YJR005C-A	ERG5	P54781	538 aa		4.85	□□□□□ -1.63
LSO1	YJR005C-A	DUS3	Q06053	668 aa	Known RBP	4.85	□□□□□ -1.63
LSO1	YJR005C-A	UBX5	Q06682	500 aa		4.85	□□□□□ -1.63
LSO1	YJR005C-A	YPR078C	Q06813	372 aa		4.85	□□□□□ -1.63
LSO1	YJR005C-A	CRD1	Q07560	283 aa		4.85	□□□□□ -1.63
LSO1	YJR005C-A	CWC2	Q12046	339 aa	Predicted RBP	4.85	□□□□□ -1.63
LSO1	YJR005C-A	MED1	Q12321	566 aa		4.85	□□□□□ -1.63
LSO1	YJR005C-A	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
LSO1	YJR005C-A	PCK1	P10963	549 aa		4.84	□□□□□ -1.63
LSO1	YJR005C-A	TCP1	P12612	559 aa	Known RBP	4.84	□□□□□ -1.63
LSO1	YJR005C-A	SEC23	P15303	768 aa	Known RBP	4.84	□□□□□ -1.63
LSO1	YJR005C-A	VMA2	P16140	517 aa	Known RBP	4.84	□□□□□ -1.63
LSO1	YJR005C-A	SPO12	P17123	173 aa		4.84	□□□□□ -1.63
LSO1	YJR005C-A	DBP5	P20449	482 aa	Known RBP	4.84	□□□□□ -1.63
LSO1	YJR005C-A	UBC1	P21734	215 aa	Known RBP	4.84	□□□□□ -1.63
LSO1	YJR005C-A	CDC60	P26637	1090 aa	Known RBP	4.84	□□□□□ -1.63
LSO1	YJR005C-A	STO1	P34160	861 aa	Known RBP	4.84	□□□□□ -1.63
LSO1	YJR005C-A	TGL1	P34163	548 aa		4.84	□□□□□ -1.63
LSO1	YJR005C-A	SHP1	P34223	423 aa		4.84	□□□□□ -1.63
LSO1	YJR005C-A	JNM1	P36224	373 aa		4.84	□□□□□ -1.63
LSO1	YJR005C-A	SKN7	P38889	622 aa		4.84	□□□□□ -1.63
LSO1	YJR005C-A	SHQ1	P40486	507 aa	Predicted RBP	4.84	□□□□□ -1.63
LSO1	YJR005C-A	ULP2	P40537	1034 aa	Predicted RBP	4.84	□□□□□ -1.63
LSO1	YJR005C-A	CEP3	P40969	608 aa		4.84	□□□□□ -1.63
LSO1	YJR005C-A	HUL4	P40985	892 aa		4.84	□□□□□ -1.63
LSO1	YJR005C-A	GPD2	P41911	440 aa	Known RBP	4.84	□□□□□ -1.63
LSO1	YJR005C-A	COS5	P47187	383 aa		4.84	□□□□□ -1.63
LSO1	YJR005C-A	PRP31	P49704	494 aa	Predicted RBP	4.84	□□□□□ -1.63
LSO1	YJR005C-A	HFM1	P51979	1187 aa		4.84	□□□□□ -1.63
LSO1	YJR005C-A	RRT6	P53117	311 aa	Predicted RBP	4.84	□□□□□ -1.63
LSO1	YJR005C-A	CAF130	P53280	1122 aa	Predicted RBP	4.84	□□□□□ -1.63
LSO1	YJR005C-A	ZPR1	P53303	486 aa	Known RBP	4.84	□□□□□ -1.63
LSO1	YJR005C-A	YAF9	P53930	226 aa		4.84	□□□□□ -1.63
LSO1	YJR005C-A	RBA50	Q04418	439 aa		4.84	□□□□□ -1.63
LSO1	YJR005C-A	TMA64	Q04600	565 aa	Known RBP	4.84	□□□□□ -1.63
LSO1	YJR005C-A	FUS2	Q05670	677 aa		4.84	□□□□□ -1.63
LSO1	YJR005C-A	SPH1	Q06160	661 aa		4.84	□□□□□ -1.63
LSO1	YJR005C-A	GUD1	Q07729	489 aa		4.84	□□□□□ -1.63
LSO1	YJR005C-A	MLH2	Q07980	695 aa		4.84	□□□□□ -1.63
LSO1	YJR005C-A	YPL277C	Q08989	487 aa		4.84	□□□□□ -1.63
LSO1	YJR005C-A	PLP2	Q12017	286 aa		4.84	□□□□□ -1.63
LSO1	YJR005C-A	TY1B-A	O13527	1196 aa	Known RBP	4.83	□□□□□ -1.64
LSO1	YJR005C-A	TOM70	P07213	617 aa	Known RBP	4.83	□□□□□ -1.64
LSO1	YJR005C-A	PET111	P08468	800 aa		4.83	□□□□□ -1.64
LSO1	YJR005C-A	PHO8	P11491	566 aa		4.83	□□□□□ -1.64
LSO1	YJR005C-A	DAL7	P21826	554 aa		4.83	□□□□□ -1.64
LSO1	YJR005C-A	FPS1	P23900	669 aa		4.83	□□□□□ -1.64
LSO1	YJR005C-A	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
LSO1	YJR005C-A	YDJ1	P25491	409 aa	Known RBP	4.83	□□□□□ -1.64
LSO1	YJR005C-A	SRB4	P32569	687 aa		4.83	□□□□□ -1.64
LSO1	YJR005C-A	UTR4	P32626	227 aa		4.83	□□□□□ -1.64
LSO1	YJR005C-A	SMC1	P32908	1225 aa		4.83	□□□□□ -1.64
LSO1	YJR005C-A	ATG19	P35193	415 aa		4.83	□□□□□ -1.64
LSO1	YJR005C-A	MCR1	P36060	302 aa	Known RBP	4.83	□□□□□ -1.64
LSO1	YJR005C-A	UBP13	P38187	747 aa		4.83	□□□□□ -1.64
LSO1	YJR005C-A	MCX1	P38323	520 aa	Predicted RBP	4.83	□□□□□ -1.64
LSO1	YJR005C-A	REI1	P38344	393 aa	Predicted RBP	4.83	□□□□□ -1.64
LSO1	YJR005C-A	FIS1	P40515	155 aa		4.83	□□□□□ -1.64
LSO1	YJR005C-A	VPS53	P47061	822 aa		4.83	□□□□□ -1.64
LSO1	YJR005C-A	YJL007C	P47080	104 aa		4.83	□□□□□ -1.64
LSO1	YJR005C-A	SGM1	P47166	707 aa		4.83	□□□□□ -1.64
LSO1	YJR005C-A	YGL039W	P53183	348 aa	Known RBP	4.83	□□□□□ -1.64
LSO1	YJR005C-A	PHM6	Q05637	104 aa		4.83	□□□□□ -1.64
LSO1	YJR005C-A	YDL057W	Q07379	328 aa		4.83	□□□□□ -1.64
LSO1	YJR005C-A	TCO89	Q08921	799 aa		4.83	□□□□□ -1.64
LSO1	YJR005C-A	TOM1	Q03280	3268 aa		4.82	□□□□□ -1.64
LSO1	YJR005C-A	GPM1	P00950	247 aa	Known RBP	4.82	□□□□□ -1.64
LSO1	YJR005C-A	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
LSO1	YJR005C-A	CHS2	P14180	963 aa		4.82	□□□□□ -1.64
LSO1	YJR005C-A	PRP22	P24384	1145 aa	Known RBP	4.82	□□□□□ -1.64
LSO1	YJR005C-A	PDC6	P26263	563 aa	Known RBP	4.82	□□□□□ -1.64
LSO1	YJR005C-A	IRE1	P32361	1115 aa		4.82	□□□□□ -1.64
LSO1	YJR005C-A	VPS35	P34110	944 aa		4.82	□□□□□ -1.64
LSO1	YJR005C-A	UBP11	P36026	717 aa		4.82	□□□□□ -1.64
LSO1	YJR005C-A	SOH1	P38633	127 aa		4.82	□□□□□ -1.64
LSO1	YJR005C-A	BRL1	P38770	471 aa		4.82	□□□□□ -1.64
LSO1	YJR005C-A	PNT1	P38969	423 aa		4.82	□□□□□ -1.64
LSO1	YJR005C-A	VID30	P53076	958 aa		4.82	□□□□□ -1.64
LSO1	YJR005C-A	YGR125W	P53273	1036 aa		4.82	□□□□□ -1.64
LSO1	YJR005C-A	PTA1	Q01329	785 aa	Predicted RBP	4.82	□□□□□ -1.64
LSO1	YJR005C-A	SLD5	Q03406	294 aa		4.82	□□□□□ -1.64
LSO1	YJR005C-A	RRB1	Q04225	511 aa	Known RBP	4.82	□□□□□ -1.64
LSO1	YJR005C-A	SML1	Q04964	104 aa		4.82	□□□□□ -1.64
LSO1	YJR005C-A	VAC14	Q06708	880 aa		4.82	□□□□□ -1.64
LSO1	YJR005C-A	WHI4	Q07655	649 aa	Known RBP	4.82	□□□□□ -1.64
LSO1	YJR005C-A	NOC3	Q07896	663 aa	Predicted RBP	4.82	□□□□□ -1.64
LSO1	YJR005C-A	SMC5	Q08204	1093 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 41.3 ms