RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W MAD1P40957 749 aa3.76□□□□□ -1.81
PEP8YJL053W EMP70P32802 667 aa3.75□□□□□ -1.81
PEP8YJL053W CCM1P48237 864 aaPredicted RBP3.75□□□□□ -1.81
PEP8YJL053W TPO2P53283 614 aa3.75□□□□□ -1.81
PEP8YJL053W ASI2P53895 289 aa3.75□□□□□ -1.81
PEP8YJL053W MPS1P54199 764 aa3.75□□□□□ -1.81
PEP8YJL053W JIP5Q06214 492 aaPredicted RBP3.75□□□□□ -1.81
PEP8YJL053W FAL1Q12099 399 aaKnown RBP3.75□□□□□ -1.81
PEP8YJL053W TAF3Q12297 353 aa3.75□□□□□ -1.81
PEP8YJL053W RGT2Q12300 763 aa3.75□□□□□ -1.81
PEP8YJL053W AGP1P25376 633 aa3.74□□□□□ -1.81
PEP8YJL053W URA1P28272 314 aaPredicted RBP3.74□□□□□ -1.81
PEP8YJL053W BCD1P38772 366 aa3.74□□□□□ -1.81
PEP8YJL053W NET1P47035 1189 aa3.74□□□□□ -1.81
PEP8YJL053W YAP1802P53309 568 aa3.74□□□□□ -1.81
PEP8YJL053W HDA1P53973 706 aa3.74□□□□□ -1.81
PEP8YJL053W VPS16Q03308 798 aa3.74□□□□□ -1.81
PEP8YJL053W NDC80P40460 691 aa3.73□□□□□ -1.81
PEP8YJL053W CCT7P42943 550 aaKnown RBP3.73□□□□□ -1.81
PEP8YJL053W GDE1Q02979 1223 aa3.73□□□□□ -1.81
PEP8YJL053W RGT1P32862 1170 aa3.72□□□□□ -1.81
PEP8YJL053W GLG1P36143 616 aa3.72□□□□□ -1.81
PEP8YJL053W REV7P38927 245 aa3.72□□□□□ -1.81
PEP8YJL053W BNA3P47039 444 aaKnown RBP3.72□□□□□ -1.81
PEP8YJL053W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
PEP8YJL053W FAA4P47912 694 aaKnown RBP3.72□□□□□ -1.81
PEP8YJL053W BPL1P48445 690 aaPredicted RBP3.72□□□□□ -1.81
PEP8YJL053W AFR1P33304 620 aa3.71□□□□□ -1.82
PEP8YJL053W SPC29P33419 253 aa3.71□□□□□ -1.82
PEP8YJL053W VBA5P36172 582 aa3.71□□□□□ -1.82
PEP8YJL053W SAK1P38990 1142 aa3.71□□□□□ -1.82
PEP8YJL053W PAC2P39937 518 aa3.71□□□□□ -1.82
PEP8YJL053W CTR1P49573 406 aa3.71□□□□□ -1.82
PEP8YJL053W UBC11P52492 156 aa3.71□□□□□ -1.82
PEP8YJL053W CWC24P53769 259 aa3.71□□□□□ -1.82
PEP8YJL053W MUS81Q04149 632 aaPredicted RBP3.71□□□□□ -1.82
PEP8YJL053W SLK19Q08581 821 aaKnown RBP3.71□□□□□ -1.82
PEP8YJL053W PIN2Q12057 282 aa3.71□□□□□ -1.82
PEP8YJL053W YLR149CQ99296 730 aa3.71□□□□□ -1.82
PEP8YJL053W LTP1P40347 161 aa3.7□□□□□ -1.82
PEP8YJL053W XBP1P40489 647 aa3.7□□□□□ -1.82
PEP8YJL053W DUS1P53759 423 aaKnown RBP3.7□□□□□ -1.82
PEP8YJL053W ASM4Q05166 528 aa3.7□□□□□ -1.82
PEP8YJL053W YLR415CO13578 112 aa3.69□□□□□ -1.82
PEP8YJL053W ERG11P10614 530 aa3.69□□□□□ -1.82
PEP8YJL053W BDH2P39713 417 aa3.69□□□□□ -1.82
PEP8YJL053W UBC9P50623 157 aaPredicted RBP3.69□□□□□ -1.82
PEP8YJL053W OSW1Q08692 278 aa3.69□□□□□ -1.82
PEP8YJL053W CYS3P31373 394 aaKnown RBP3.68□□□□□ -1.82
PEP8YJL053W HIR1P32479 840 aa3.68□□□□□ -1.82
PEP8YJL053W REC104P33323 182 aa3.68□□□□□ -1.82
PEP8YJL053W SIT1P39980 628 aa3.68□□□□□ -1.82
PEP8YJL053W ARG2P40360 574 aa3.68□□□□□ -1.82
PEP8YJL053W HAL9Q12180 1030 aa3.68□□□□□ -1.82
PEP8YJL053W ATG11Q12527 1178 aa3.68□□□□□ -1.82
PEP8YJL053W VAC8P39968 578 aa3.67□□□□□ -1.82
PEP8YJL053W HOS4P40480 1083 aa3.67□□□□□ -1.82
PEP8YJL053W SSY5P47002 699 aa3.67□□□□□ -1.82
PEP8YJL053W ALD6P54115 500 aaKnown RBP3.67□□□□□ -1.82
PEP8YJL053W SHE9Q04172 456 aa3.67□□□□□ -1.82
PEP8YJL053W LCD1Q04377 747 aa3.67□□□□□ -1.82
PEP8YJL053W TGL5Q12043 749 aa3.67□□□□□ -1.82
PEP8YJL053W TOK1P40310 691 aa3.66□□□□□ -1.82
PEP8YJL053W PFA3P42836 336 aa3.66□□□□□ -1.82
PEP8YJL053W WRS1Q12109 432 aaKnown RBP3.66□□□□□ -1.82
PEP8YJL053W PYC1P11154 1178 aaKnown RBP3.65□□□□□ -1.83
PEP8YJL053W NUP1P20676 1076 aa3.65□□□□□ -1.83
PEP8YJL053W CCR4P31384 837 aaKnown RBP3.65□□□□□ -1.83
PEP8YJL053W ERT1P38140 529 aa3.65□□□□□ -1.83
PEP8YJL053W RSP5P39940 809 aaKnown RBP3.65□□□□□ -1.83
PEP8YJL053W TDA9Q04545 1251 aa3.65□□□□□ -1.83
PEP8YJL053W RSC3Q06639 885 aa3.65□□□□□ -1.83
PEP8YJL053W YKL033W-AQ86ZR7 236 aa3.65□□□□□ -1.83
PEP8YJL053W PRC1P00729 532 aa3.64□□□□□ -1.83
PEP8YJL053W NNF1P47149 201 aa3.64□□□□□ -1.83
PEP8YJL053W MRK1P50873 501 aa3.64□□□□□ -1.83
PEP8YJL053W YOR022CQ12204 715 aa3.64□□□□□ -1.83
PEP8YJL053W PGK1P00560 416 aaKnown RBP3.63□□□□□ -1.83
PEP8YJL053W RPA135P22138 1203 aaKnown RBP3.63□□□□□ -1.83
PEP8YJL053W YJL049WP47048 450 aa3.63□□□□□ -1.83
PEP8YJL053W SCT1P32784 759 aa3.62□□□□□ -1.83
PEP8YJL053W MRP8P35719 219 aa3.62□□□□□ -1.83
PEP8YJL053W YKL069WP36088 180 aa3.62□□□□□ -1.83
PEP8YJL053W MEP2P41948 499 aa3.62□□□□□ -1.83
PEP8YJL053W SSF2Q12153 453 aaPredicted RBP3.62□□□□□ -1.83
PEP8YJL053W PRI2P20457 528 aa3.61□□□□□ -1.83
PEP8YJL053W SAP190P36123 1033 aa3.61□□□□□ -1.83
PEP8YJL053W PBY1P38254 753 aa3.61□□□□□ -1.83
PEP8YJL053W YBR259WP38338 688 aa3.61□□□□□ -1.83
PEP8YJL053W SFB3P38810 929 aa3.61□□□□□ -1.83
PEP8YJL053W CCT3P39077 534 aaKnown RBP3.61□□□□□ -1.83
PEP8YJL053W NOG2P53742 486 aaKnown RBP3.61□□□□□ -1.83
PEP8YJL053W FMP30Q02883 468 aa3.61□□□□□ -1.83
PEP8YJL053W BUL2Q03758 920 aaKnown RBP3.61□□□□□ -1.83
PEP8YJL053W GAD1Q04792 585 aa3.61□□□□□ -1.83
PEP8YJL053W TDA5Q06417 326 aaKnown RBP3.61□□□□□ -1.83
PEP8YJL053W OPI10Q08202 246 aa3.61□□□□□ -1.83
PEP8YJL053W SIC1P38634 284 aa3.6□□□□□ -1.83
PEP8YJL053W NIT3P49954 291 aa3.6□□□□□ -1.83
PEP8YJL053W PAN2P53010 1115 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 33.9 ms