RNA–Protein interactions for RNA: YJL036W

SNX4, Transcript of Sorting nexin, yeastyeast

Gene SNX4, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX4YJL036W MTH1P35198 433 aa4.41□□□□□ -1.7
SNX4YJL036W TPM2P40414 161 aa4.41□□□□□ -1.7
SNX4YJL036W NOP2P40991 618 aaKnown RBP4.41□□□□□ -1.7
SNX4YJL036W NUP145P49687 1317 aa4.41□□□□□ -1.7
SNX4YJL036W CDC48P25694 835 aaKnown RBP4.4□□□□□ -1.71
SNX4YJL036W GDH3P39708 457 aa4.4□□□□□ -1.71
SNX4YJL036W GND2P53319 492 aa4.4□□□□□ -1.71
SNX4YJL036W TRM13Q12383 476 aa4.4□□□□□ -1.71
SNX4YJL036W HBN1Q96VH4 193 aa4.4□□□□□ -1.71
SNX4YJL036W PPR1P07272 904 aaPredicted RBP4.39□□□□□ -1.71
SNX4YJL036W MRC1P25588 1096 aa4.39□□□□□ -1.71
SNX4YJL036W SCT1P32784 759 aa4.39□□□□□ -1.71
SNX4YJL036W YBR284WP38150 797 aa4.39□□□□□ -1.71
SNX4YJL036W YBR238CP38330 731 aaKnown RBP4.39□□□□□ -1.71
SNX4YJL036W TSL1P38427 1098 aaKnown RBP4.39□□□□□ -1.71
SNX4YJL036W DSS1P39112 969 aa4.39□□□□□ -1.71
SNX4YJL036W GUS1P46655 708 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
SNX4YJL036W PMT3P47190 753 aa4.39□□□□□ -1.71
SNX4YJL036W YGR237CP50089 785 aa4.39□□□□□ -1.71
SNX4YJL036W FOL1P53848 824 aa4.39□□□□□ -1.71
SNX4YJL036W SLU7Q02775 382 aaKnown RBP4.39□□□□□ -1.71
SNX4YJL036W YDR306CQ06640 478 aa4.39□□□□□ -1.71
SNX4YJL036W NOT3P06102 836 aaKnown RBP4.38□□□□□ -1.71
SNX4YJL036W ALG7P07286 448 aa4.38□□□□□ -1.71
SNX4YJL036W TOP3P13099 656 aa4.38□□□□□ -1.71
SNX4YJL036W SSD1P24276 1250 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
SNX4YJL036W AAR2P32357 355 aaPredicted RBP4.38□□□□□ -1.71
SNX4YJL036W HBS1P32769 611 aaKnown RBP4.38□□□□□ -1.71
SNX4YJL036W PAF1P38351 445 aa4.38□□□□□ -1.71
SNX4YJL036W YKE2P52553 114 aa4.38□□□□□ -1.71
SNX4YJL036W MAL11P53048 616 aa4.38□□□□□ -1.71
SNX4YJL036W GSY1P23337 708 aa4.37□□□□□ -1.71
SNX4YJL036W MEF1P25039 761 aa4.37□□□□□ -1.71
SNX4YJL036W PPH3P32345 308 aa4.37□□□□□ -1.71
SNX4YJL036W YNL193WP53870 558 aa4.37□□□□□ -1.71
SNX4YJL036W ERG5P54781 538 aa4.37□□□□□ -1.71
SNX4YJL036W VPS30Q02948 557 aa4.37□□□□□ -1.71
SNX4YJL036W PEX19Q07418 342 aa4.37□□□□□ -1.71
SNX4YJL036W ADE8P04161 214 aa4.36□□□□□ -1.71
SNX4YJL036W FBP1P09201 348 aa4.36□□□□□ -1.71
SNX4YJL036W MSD1P15179 658 aaKnown RBP4.36□□□□□ -1.71
SNX4YJL036W SWE1P32944 819 aa4.36□□□□□ -1.71
SNX4YJL036W STE13P33894 931 aa4.36□□□□□ -1.71
SNX4YJL036W UBP6P43593 499 aaKnown RBP4.36□□□□□ -1.71
SNX4YJL036W SDA1P53313 767 aaKnown RBP4.36□□□□□ -1.71
SNX4YJL036W UME1Q03010 460 aa4.36□□□□□ -1.71
SNX4YJL036W THI73Q07904 523 aa4.36□□□□□ -1.71
SNX4YJL036W FAP7Q12055 197 aaPredicted RBP4.36□□□□□ -1.71
SNX4YJL036W NDJ1Q12366 352 aa4.36□□□□□ -1.71
SNX4YJL036W TMA17Q12513 150 aa4.36□□□□□ -1.71
SNX4YJL036W MDM12Q92328 271 aa4.36□□□□□ -1.71
SNX4YJL036W VBA3P25594 458 aa4.35□□□□□ -1.71
SNX4YJL036W SEC6P32844 805 aa4.35□□□□□ -1.71
SNX4YJL036W VPS72Q03388 795 aa4.35□□□□□ -1.71
SNX4YJL036W SSL1Q04673 461 aaPredicted RBP4.35□□□□□ -1.71
SNX4YJL036W YPR071WQ12346 211 aa4.35□□□□□ -1.71
SNX4YJL036W PHR1P05066 565 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
SNX4YJL036W SEC21P32074 935 aaKnown RBP4.34□□□□□ -1.71
SNX4YJL036W CTF13P35203 478 aa4.34□□□□□ -1.71
SNX4YJL036W PET10P36139 283 aa4.34□□□□□ -1.71
SNX4YJL036W SDP1P40479 209 aa4.34□□□□□ -1.71
SNX4YJL036W SDS3P40505 327 aa4.34□□□□□ -1.71
SNX4YJL036W YJR120WP47157 116 aa4.34□□□□□ -1.71
SNX4YJL036W MET3P08536 511 aa4.33□□□□□ -1.72
SNX4YJL036W NPP1P25353 742 aa4.33□□□□□ -1.72
SNX4YJL036W YRO2P38079 344 aa4.33□□□□□ -1.72
SNX4YJL036W ENP1P38333 483 aaKnown RBP4.33□□□□□ -1.72
SNX4YJL036W PMC1P38929 1173 aaPredicted RBP4.33□□□□□ -1.72
SNX4YJL036W SIT1P39980 628 aa4.33□□□□□ -1.72
SNX4YJL036W ALG2P43636 503 aa4.33□□□□□ -1.72
SNX4YJL036W PEX8P53248 589 aa4.33□□□□□ -1.72
SNX4YJL036W HBT1Q07653 1046 aaKnown RBP4.33□□□□□ -1.72
SNX4YJL036W TRM11Q12463 433 aa4.33□□□□□ -1.72
SNX4YJL036W DAS1P47005 663 aa4.32□□□□□ -1.72
SNX4YJL036W DLT1Q04216 342 aa4.32□□□□□ -1.72
SNX4YJL036W LCD1Q04377 747 aa4.32□□□□□ -1.72
SNX4YJL036W YLR001CQ07895 862 aa4.32□□□□□ -1.72
SNX4YJL036W BUD21Q08492 214 aaPredicted RBP4.32□□□□□ -1.72
SNX4YJL036W FRE5Q08908 694 aa4.32□□□□□ -1.72
SNX4YJL036W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
SNX4YJL036W SWM1Q12379 170 aa4.32□□□□□ -1.72
SNX4YJL036W TMA7Q3E764 64 aaKnown RBP4.32□□□□□ -1.72
SNX4YJL036W RFA1P22336 621 aaKnown RBP4.31□□□□□ -1.72
SNX4YJL036W PEX2P32800 271 aa4.31□□□□□ -1.72
SNX4YJL036W AFR1P33304 620 aa4.31□□□□□ -1.72
SNX4YJL036W TYS1P36421 394 aaKnown RBP4.31□□□□□ -1.72
SNX4YJL036W YHL017WP38745 532 aa4.31□□□□□ -1.72
SNX4YJL036W CTF8P38877 133 aa4.31□□□□□ -1.72
SNX4YJL036W YIL108WP40483 696 aaKnown RBP4.31□□□□□ -1.72
SNX4YJL036W CCM1P48237 864 aaPredicted RBP4.31□□□□□ -1.72
SNX4YJL036W GPG1P53130 126 aa4.31□□□□□ -1.72
SNX4YJL036W SLX4Q12098 748 aa4.31□□□□□ -1.72
SNX4YJL036W CDC9P04819 755 aa4.3□□□□□ -1.72
SNX4YJL036W SRD1P09007 221 aa4.3□□□□□ -1.72
SNX4YJL036W RAD18P10862 487 aa4.3□□□□□ -1.72
SNX4YJL036W RPD3P32561 433 aa4.3□□□□□ -1.72
SNX4YJL036W TYE7P33122 291 aaPredicted RBP4.3□□□□□ -1.72
SNX4YJL036W SPC29P33419 253 aa4.3□□□□□ -1.72
SNX4YJL036W PPS1P38148 807 aa4.3□□□□□ -1.72
SNX4YJL036W ELO3P40319 345 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 55.9 ms