RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	SMC6	Q12749	1114 aa		6.21	□□□□□ -1.42
RSC30	YHR056C	SSB1	P11484	613 aa	Known RBP	6.21	□□□□□ -1.42
RSC30	YHR056C	FBP26	P32604	452 aa		6.21	□□□□□ -1.42
RSC30	YHR056C	ORC6	P38826	435 aa		6.21	□□□□□ -1.42
RSC30	YHR056C	SSB2	P40150	613 aa	Known RBP	6.21	□□□□□ -1.42
RSC30	YHR056C	CUE3	P53137	624 aa	Known RBP	6.21	□□□□□ -1.42
RSC30	YHR056C	SLA2	P33338	968 aa		6.2	□□□□□ -1.42
RSC30	YHR056C	PCM1	P38628	557 aa	Known RBP	6.2	□□□□□ -1.42
RSC30	YHR056C	SAH1	P39954	449 aa	Known RBP	6.2	□□□□□ -1.42
RSC30	YHR056C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	6.2	□□□□□ -1.42	not detected
RSC30	YHR056C	KRE33	P53914	1056 aa	Known RBP	6.2	□□□□□ -1.42
RSC30	YHR056C	TRS130	Q03660	1102 aa		6.2	□□□□□ -1.42
RSC30	YHR056C	SEN1	Q00416	2231 aa	Known RBP	6.2	□□□□□ -1.42
RSC30	YHR056C	TGL3	P40308	642 aa		6.2	□□□□□ -1.42
RSC30	YHR056C	SEC5	P89102	971 aa		6.2	□□□□□ -1.42
RSC30	YHR056C	YDL057W	Q07379	328 aa		6.2	□□□□□ -1.42
RSC30	YHR056C	SGT2	Q12118	346 aa	Known RBP	6.2	□□□□□ -1.42
RSC30	YHR056C	YGL081W	P53156	320 aa		6.19	□□□□□ -1.42
RSC30	YHR056C	CWC21	Q03375	135 aa	Known RBP	6.19	□□□□□ -1.42
RSC30	YHR056C	GIS4	Q04233	774 aa		6.19	□□□□□ -1.42
RSC30	YHR056C	YSC83	P32792	385 aa		6.19	□□□□□ -1.42
RSC30	YHR056C	SHE3	P38272	425 aa	Known RBP	6.19	□□□□□ -1.42
RSC30	YHR056C	TIF5	P38431	405 aa	Known RBP	6.19	□□□□□ -1.42
RSC30	YHR056C	STT3	P39007	718 aa	Known RBP	6.19	□□□□□ -1.42
RSC30	YHR056C	UTP8	P53276	713 aa	Known RBP	6.19	□□□□□ -1.42
RSC30	YHR056C	PGA3	Q12746	312 aa	Known RBP	6.19	□□□□□ -1.42
RSC30	YHR056C	MATALPHA2	P0CY08	210 aa		6.18	□□□□□ -1.42
RSC30	YHR056C	HMLALPHA2	P0CY09	210 aa		6.18	□□□□□ -1.42
RSC30	YHR056C	KIP1	P28742	1111 aa		6.18	□□□□□ -1.42
RSC30	YHR056C	RAD16	P31244	790 aa		6.18	□□□□□ -1.42
RSC30	YHR056C	DOT6	P40059	670 aa	Known RBP	6.18	□□□□□ -1.42
RSC30	YHR056C	YKE2	P52553	114 aa		6.18	□□□□□ -1.42
RSC30	YHR056C	RTC4	P53850	401 aa		6.18	□□□□□ -1.42
RSC30	YHR056C	CIT2	P08679	460 aa		6.18	□□□□□ -1.42
RSC30	YHR056C	TFB1	P32776	642 aa		6.18	□□□□□ -1.42
RSC30	YHR056C	PEX2	P32800	271 aa		6.18	□□□□□ -1.42
RSC30	YHR056C	AVT1	P47082	602 aa		6.18	□□□□□ -1.42
RSC30	YHR056C	VTC3	Q02725	835 aa		6.18	□□□□□ -1.42
RSC30	YHR056C	YDL206W	Q12424	762 aa		6.18	□□□□□ -1.42
RSC30	YHR056C	YKR051W	P36142	418 aa		6.17	□□□□□ -1.42
RSC30	YHR056C	GIP1	P38229	639 aa		6.17	□□□□□ -1.42
RSC30	YHR056C	PGA2	P53903	129 aa		6.17	□□□□□ -1.42
RSC30	YHR056C	BSP1	Q06604	576 aa		6.17	□□□□□ -1.42
RSC30	YHR056C	NCR1	Q12200	1170 aa		6.17	□□□□□ -1.42
RSC30	YHR056C	CTF3	Q12748	733 aa		6.17	□□□□□ -1.42
RSC30	YHR056C	SIR1	P21691	654 aa		6.17	□□□□□ -1.42
RSC30	YHR056C	PPH22	P23595	377 aa		6.17	□□□□□ -1.42
RSC30	YHR056C	ATG12	P38316	186 aa		6.17	□□□□□ -1.42
RSC30	YHR056C	TPO2	P53283	614 aa		6.17	□□□□□ -1.42
RSC30	YHR056C	YDR090C	Q03193	310 aa		6.17	□□□□□ -1.42
RSC30	YHR056C	YLH47	Q06493	454 aa		6.17	□□□□□ -1.42
RSC30	YHR056C	MED6	P38782	295 aa		6.16	□□□□□ -1.42
RSC30	YHR056C	ZPS1	Q12512	249 aa		6.16	□□□□□ -1.42
RSC30	YHR056C	FRS2	P15625	503 aa	Known RBP	6.16	□□□□□ -1.42
RSC30	YHR056C	SPO11	P23179	398 aa		6.16	□□□□□ -1.42
RSC30	YHR056C	MNN4	P36044	1178 aa		6.16	□□□□□ -1.42
RSC30	YHR056C	UBP13	P38187	747 aa		6.16	□□□□□ -1.42
RSC30	YHR056C	SIP3	P38717	1229 aa		6.16	□□□□□ -1.42
RSC30	YHR056C	RPN10	P38886	268 aa	Known RBP	6.16	□□□□□ -1.42
RSC30	YHR056C	IML2	P47031	731 aa		6.16	□□□□□ -1.42
RSC30	YHR056C	TOF2	Q02208	771 aa		6.16	□□□□□ -1.42
RSC30	YHR056C	TPK1	P06244	397 aa		6.15	□□□□□ -1.42
RSC30	YHR056C	REV1	P12689	985 aa		6.15	□□□□□ -1.42
RSC30	YHR056C	NAM7	P30771	971 aa	Known RBP	6.15	□□□□□ -1.42
RSC30	YHR056C	SHQ1	P40486	507 aa	Predicted RBP	6.15	□□□□□ -1.42
RSC30	YHR056C	NPA3	P47122	385 aa		6.15	□□□□□ -1.42
RSC30	YHR056C	TRS120	Q04183	1289 aa		6.15	□□□□□ -1.42
RSC30	YHR056C	YPQ1	Q12010	308 aa		6.15	□□□□□ -1.42
RSC30	YHR056C	GAC1	P28006	793 aa		6.15	□□□□□ -1.43
RSC30	YHR056C	LEU5	P38702	357 aa		6.15	□□□□□ -1.43
RSC30	YHR056C	RMD8	P43620	662 aa		6.15	□□□□□ -1.43
RSC30	YHR056C	NMA2	P53204	395 aa		6.15	□□□□□ -1.43
RSC30	YHR056C	BRN1	P38170	754 aa		6.14	□□□□□ -1.43
RSC30	YHR056C	AIM9	P40053	627 aa	Known RBP	6.14	□□□□□ -1.43
RSC30	YHR056C	OSW5	P40219	148 aa		6.14	□□□□□ -1.43
RSC30	YHR056C	ULI1	P43604	169 aa		6.14	□□□□□ -1.43
RSC30	YHR056C	YPL014W	Q02606	381 aa		6.14	□□□□□ -1.43
RSC30	YHR056C	CLU1	Q03690	1277 aa	Known RBP	6.14	□□□□□ -1.43
RSC30	YHR056C	YCG1	Q06680	1035 aa		6.14	□□□□□ -1.43
RSC30	YHR056C	ALG1	P16661	449 aa		6.14	□□□□□ -1.43
RSC30	YHR056C	NUP60	P39705	539 aa		6.14	□□□□□ -1.43
RSC30	YHR056C	NPP2	P39997	493 aa		6.14	□□□□□ -1.43
RSC30	YHR056C	YGR153W	P48238	217 aa		6.14	□□□□□ -1.43
RSC30	YHR056C	CEG1	Q01159	459 aa	Predicted RBP	6.14	□□□□□ -1.43
RSC30	YHR056C	HRT3	Q12347	344 aa		6.14	□□□□□ -1.43
RSC30	YHR056C	NBL1	Q3E7Y6	73 aa		6.14	□□□□□ -1.43
RSC30	YHR056C	PRR1	P28708	518 aa		6.13	□□□□□ -1.43
RSC30	YHR056C	SFP1	P32432	683 aa		6.13	□□□□□ -1.43
RSC30	YHR056C	PRS1	P32895	427 aa	Known RBP	6.13	□□□□□ -1.43
RSC30	YHR056C	ASN1	P49089	572 aa	Known RBP	6.13	□□□□□ -1.43
RSC30	YHR056C	CBK1	P53894	756 aa		6.13	□□□□□ -1.43
RSC30	YHR056C	YAT1	P80235	687 aa		6.13	□□□□□ -1.43
RSC30	YHR056C	GCR2	Q01722	534 aa		6.13	□□□□□ -1.43
RSC30	YHR056C	OPT2	Q06593	877 aa		6.13	□□□□□ -1.43
RSC30	YHR056C	SHS1	Q07657	551 aa		6.13	□□□□□ -1.43
RSC30	YHR056C	YOR296W	Q08748	1289 aa		6.13	□□□□□ -1.43
RSC30	YHR056C	YRR1	Q12172	810 aa		6.13	□□□□□ -1.43
RSC30	YHR056C	KIN3	P22209	435 aa		6.13	□□□□□ -1.43
RSC30	YHR056C	TKL2	P33315	681 aa		6.13	□□□□□ -1.43
RSC30	YHR056C	YHL017W	P38745	532 aa		6.13	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms