RNA–Protein interactions for RNA: YDR356W

SPC110, Transcript of Inner plaque spindle pole body (SPB) component, yeastyeast

Gene SPC110, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC110YDR356W RAD55P38953 406 aa1.59□□□□□ -2.16
SPC110YDR356W DSS1P39112 969 aa1.59□□□□□ -2.16
SPC110YDR356W VPS8P39702 1274 aa1.59□□□□□ -2.16
SPC110YDR356W SWD1P39706 426 aa1.59□□□□□ -2.16
SPC110YDR356W NUP82P40368 713 aa1.59□□□□□ -2.16
SPC110YDR356W UTP25P40498 721 aaKnown RBP1.59□□□□□ -2.16
SPC110YDR356W MND2P40577 368 aa1.59□□□□□ -2.16
SPC110YDR356W ALA1P40825 983 aaKnown RBP1.59□□□□□ -2.16
SPC110YDR356W CIR1P42940 261 aa1.59□□□□□ -2.16
SPC110YDR356W EMC2P47133 292 aaKnown RBP1.59□□□□□ -2.16
SPC110YDR356W ABM1P47146 123 aa1.59□□□□□ -2.16
SPC110YDR356W CWH41P53008 833 aa1.59□□□□□ -2.16
SPC110YDR356W LCL3P53153 274 aa1.59□□□□□ -2.16
SPC110YDR356W YGR016WP53209 190 aa1.59□□□□□ -2.16
SPC110YDR356W PBP1P53297 722 aaKnown RBP1.59□□□□□ -2.16
SPC110YDR356W IST1P53843 298 aaPredicted RBP1.59□□□□□ -2.16
SPC110YDR356W YNL193WP53870 558 aa1.59□□□□□ -2.16
SPC110YDR356W UBX4P54730 416 aa1.59□□□□□ -2.16
SPC110YDR356W MET14Q02196 202 aa1.59□□□□□ -2.16
SPC110YDR356W CUS1Q02554 436 aaPredicted RBP1.59□□□□□ -2.16
SPC110YDR356W ULP1Q02724 621 aa1.59□□□□□ -2.16
SPC110YDR356W NOG1Q02892 647 aaKnown RBP1.59□□□□□ -2.16
SPC110YDR356W SNX41Q04053 625 aa1.59□□□□□ -2.16
SPC110YDR356W TFC6Q06339 672 aa1.59□□□□□ -2.16
SPC110YDR356W TDA5Q06417 326 aaKnown RBP1.59□□□□□ -2.16
SPC110YDR356W NOT5Q12514 560 aaPredicted RBP1.59□□□□□ -2.16
SPC110YDR356W SSN2P38931 1420 aa1.59□□□□□ -2.16
SPC110YDR356W MCM1P11746 286 aa1.58□□□□□ -2.16
SPC110YDR356W HAP4P14064 554 aa1.58□□□□□ -2.16
SPC110YDR356W FAR1P21268 830 aa1.58□□□□□ -2.16
SPC110YDR356W SEC15P22224 910 aa1.58□□□□□ -2.16
SPC110YDR356W MRPL25P23369 157 aa1.58□□□□□ -2.16
SPC110YDR356W PRP28P23394 588 aa1.58□□□□□ -2.16
SPC110YDR356W MET4P32389 672 aa1.58□□□□□ -2.16
SPC110YDR356W FRD1P32614 470 aaKnown RBP1.58□□□□□ -2.16
SPC110YDR356W MRE11P32829 692 aa1.58□□□□□ -2.16
SPC110YDR356W SEC8P32855 1065 aa1.58□□□□□ -2.16
SPC110YDR356W VPS17P32913 551 aa1.58□□□□□ -2.16
SPC110YDR356W TTI1P36097 1038 aa1.58□□□□□ -2.16
SPC110YDR356W CAF4P36130 643 aa1.58□□□□□ -2.16
SPC110YDR356W OPY1P38271 328 aa1.58□□□□□ -2.16
SPC110YDR356W TPS3P38426 1054 aaKnown RBP1.58□□□□□ -2.16
SPC110YDR356W YHL012WP38709 493 aa1.58□□□□□ -2.16
SPC110YDR356W SIP3P38717 1229 aa1.58□□□□□ -2.16
SPC110YDR356W FHL1P39521 936 aa1.58□□□□□ -2.16
SPC110YDR356W ARB1P40024 610 aaKnown RBP1.58□□□□□ -2.16
SPC110YDR356W NDE1P40215 560 aa1.58□□□□□ -2.16
SPC110YDR356W ALG5P40350 334 aa1.58□□□□□ -2.16
SPC110YDR356W MPH1P40562 993 aa1.58□□□□□ -2.16
SPC110YDR356W GPD2P41911 440 aaKnown RBP1.58□□□□□ -2.16
SPC110YDR356W YDL183CP48569 320 aa1.58□□□□□ -2.16
SPC110YDR356W GCV2P49095 1034 aa1.58□□□□□ -2.16
SPC110YDR356W PSP2P50109 593 aaKnown RBP1.58□□□□□ -2.16
SPC110YDR356W SSU72P53538 206 aaPredicted RBP1.58□□□□□ -2.16
SPC110YDR356W COP1P53622 1201 aaKnown RBP1.58□□□□□ -2.16
SPC110YDR356W ALO1P54783 526 aaKnown RBP1.58□□□□□ -2.16
SPC110YDR356W SSL2Q00578 843 aa1.58□□□□□ -2.16
SPC110YDR356W RSC4Q02206 625 aa1.58□□□□□ -2.16
SPC110YDR356W NUP116Q02630 1113 aa1.58□□□□□ -2.16
SPC110YDR356W EAR1Q03212 550 aa1.58□□□□□ -2.16
SPC110YDR356W PKH3Q03306 898 aaPredicted RBP1.58□□□□□ -2.16
SPC110YDR356W SSQ1Q05931 657 aaPredicted RBP1.58□□□□□ -2.16
SPC110YDR356W ESC2Q06340 456 aa1.58□□□□□ -2.16
SPC110YDR356W MCM21Q06675 368 aa1.58□□□□□ -2.16
SPC110YDR356W DAP1Q12091 152 aa1.58□□□□□ -2.16
SPC110YDR356W YRA1Q12159 226 aaKnown RBP1.58□□□□□ -2.16
SPC110YDR356W BUG1Q12191 341 aa1.58□□□□□ -2.16
SPC110YDR356W TAF3Q12297 353 aa1.58□□□□□ -2.16
SPC110YDR356W SEY1Q99287 776 aa1.58□□□□□ -2.16
SPC110YDR356W VPS15P22219 1454 aa1.58□□□□□ -2.16
SPC110YDR356W SRB8P25648 1427 aa1.58□□□□□ -2.16
SPC110YDR356W SCC2Q04002 1493 aa1.58□□□□□ -2.16
SPC110YDR356W MMS22Q06164 1454 aa1.58□□□□□ -2.16
SPC110YDR356W NOT3P06102 836 aaKnown RBP1.58□□□□□ -2.16
SPC110YDR356W GAL7P08431 366 aa1.58□□□□□ -2.16
SPC110YDR356W MATALPHA2P0CY08 210 aa1.58□□□□□ -2.16
SPC110YDR356W HMLALPHA2P0CY09 210 aa1.58□□□□□ -2.16
SPC110YDR356W NMT1P14743 455 aa1.58□□□□□ -2.16
SPC110YDR356W RNR1P21524 888 aaKnown RBP1.58□□□□□ -2.16
SPC110YDR356W RER1P25560 188 aa1.58□□□□□ -2.16
SPC110YDR356W CDC15P27636 974 aa1.58□□□□□ -2.16
SPC110YDR356W URA1P28272 314 aaPredicted RBP1.58□□□□□ -2.16
SPC110YDR356W YJU2P28320 278 aaPredicted RBP1.58□□□□□ -2.16
SPC110YDR356W SWC3P31376 625 aa1.58□□□□□ -2.16
SPC110YDR356W BIO2P32451 375 aa1.58□□□□□ -2.16
SPC110YDR356W HIR1P32479 840 aa1.58□□□□□ -2.16
SPC110YDR356W GCD6P32501 712 aaKnown RBP1.58□□□□□ -2.16
SPC110YDR356W PET112P33893 541 aa1.58□□□□□ -2.16
SPC110YDR356W UTP11P34247 250 aaPredicted RBP1.58□□□□□ -2.16
SPC110YDR356W NTH2P35172 780 aa1.58□□□□□ -2.16
SPC110YDR356W NUP120P35729 1037 aa1.58□□□□□ -2.16
SPC110YDR356W DRE2P36152 348 aa1.58□□□□□ -2.16
SPC110YDR356W PBP2P38151 413 aaKnown RBP RIP-Chip data1.58□□□□□ -2.16not detected
SPC110YDR356W OLA1P38219 394 aaKnown RBP1.58□□□□□ -2.16
SPC110YDR356W IFA38P38286 347 aa1.58□□□□□ -2.16
SPC110YDR356W SUR2P38992 349 aa1.58□□□□□ -2.16
SPC110YDR356W MNT3P40549 630 aa1.58□□□□□ -2.16
SPC110YDR356W DOT5P40553 215 aa1.58□□□□□ -2.16
SPC110YDR356W MKT1P40850 830 aaKnown RBP1.58□□□□□ -2.16
SPC110YDR356W HUL4P40985 892 aa1.58□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms