RNA–Protein interactions for RNA: YDR337W

MRPS28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene MRPS28, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPS28	YDR337W	SWI3	P32591	825 aa		7.25	□□□□□ -1.25
MRPS28	YDR337W	SET5	P38890	526 aa	Known RBP	7.25	□□□□□ -1.25
MRPS28	YDR337W	NPP2	P39997	493 aa		7.25	□□□□□ -1.25
MRPS28	YDR337W	NDC80	P40460	691 aa		7.25	□□□□□ -1.25
MRPS28	YDR337W	HXT8	P40886	569 aa		7.25	□□□□□ -1.25
MRPS28	YDR337W	CEP3	P40969	608 aa		7.25	□□□□□ -1.25
MRPS28	YDR337W	ASN1	P49089	572 aa	Known RBP	7.25	□□□□□ -1.25
MRPS28	YDR337W	MNP1	P53163	194 aa	Predicted RBP	7.25	□□□□□ -1.25
MRPS28	YDR337W	ULP1	Q02724	621 aa		7.25	□□□□□ -1.25
MRPS28	YDR337W	ECM7	Q06200	448 aa		7.25	□□□□□ -1.25
MRPS28	YDR337W	TSR1	Q07381	788 aa	Known RBP	7.25	□□□□□ -1.25
MRPS28	YDR337W	IWR1	Q07532	353 aa	Predicted RBP	7.25	□□□□□ -1.25
MRPS28	YDR337W	YOR131C	Q12486	218 aa		7.25	□□□□□ -1.25
MRPS28	YDR337W	RTP1	Q12751	981 aa		7.25	□□□□□ -1.25
MRPS28	YDR337W	TRP2	P00899	507 aa	Known RBP	7.24	□□□□□ -1.25
MRPS28	YDR337W	WHI2	P12611	486 aa		7.24	□□□□□ -1.25
MRPS28	YDR337W	AFT1	P22149	690 aa		7.24	□□□□□ -1.25
MRPS28	YDR337W	KIP1	P28742	1111 aa		7.24	□□□□□ -1.25
MRPS28	YDR337W	CDC11	P32458	415 aa		7.24	□□□□□ -1.25
MRPS28	YDR337W	EXO5	P38289	585 aa		7.24	□□□□□ -1.25
MRPS28	YDR337W	FTR1	P40088	404 aa		7.24	□□□□□ -1.25
MRPS28	YDR337W	ESBP6	P53918	673 aa		7.24	□□□□□ -1.25
MRPS28	YDR337W	BOP3	P53958	396 aa		7.24	□□□□□ -1.25
MRPS28	YDR337W	SIL1	Q08199	421 aa		7.24	□□□□□ -1.25
MRPS28	YDR337W	DAS2	Q12084	232 aa		7.24	□□□□□ -1.25
MRPS28	YDR337W	MAM3	Q12296	706 aa		7.24	□□□□□ -1.25
MRPS28	YDR337W	CDC33	P07260	213 aa	Known RBP	7.23	□□□□□ -1.25
MRPS28	YDR337W	SNA3	P14359	133 aa		7.23	□□□□□ -1.25
MRPS28	YDR337W	PRR1	P28708	518 aa		7.23	□□□□□ -1.25
MRPS28	YDR337W	MSS51	P32335	436 aa		7.23	□□□□□ -1.25
MRPS28	YDR337W	RAD54	P32863	898 aa		7.23	□□□□□ -1.25
MRPS28	YDR337W	SKG6	P32900	734 aa	Predicted RBP	7.23	□□□□□ -1.25
MRPS28	YDR337W	RIM101	P33400	625 aa		7.23	□□□□□ -1.25
MRPS28	YDR337W	YKL050C	P35736	922 aa		7.23	□□□□□ -1.25
MRPS28	YDR337W	MRX3	P38172	270 aa		7.23	□□□□□ -1.25
MRPS28	YDR337W	MMS4	P38257	691 aa		7.23	□□□□□ -1.25
MRPS28	YDR337W	REI1	P38344	393 aa	Predicted RBP	7.23	□□□□□ -1.25
MRPS28	YDR337W	TCD1	P38756	429 aa		7.23	□□□□□ -1.25
MRPS28	YDR337W	AFG3	P39925	761 aa		7.23	□□□□□ -1.25
MRPS28	YDR337W	INP51	P40559	946 aa	Known RBP	7.23	□□□□□ -1.25
MRPS28	YDR337W	CPR7	P47103	393 aa		7.23	□□□□□ -1.25
MRPS28	YDR337W	CLA4	P48562	842 aa		7.23	□□□□□ -1.25
MRPS28	YDR337W	DRN1	P53255	507 aa	Known RBP	7.23	□□□□□ -1.25
MRPS28	YDR337W	RPA49	Q01080	415 aa	Predicted RBP	7.23	□□□□□ -1.25
MRPS28	YDR337W	STE20	Q03497	939 aa	Known RBP	7.23	□□□□□ -1.25
MRPS28	YDR337W	YML020W	Q03722	664 aa		7.23	□□□□□ -1.25
MRPS28	YDR337W	SFI1	Q12369	946 aa		7.23	□□□□□ -1.25
MRPS28	YDR337W	PET111	P08468	800 aa		7.22	□□□□□ -1.25
MRPS28	YDR337W	RPL4A	P10664	362 aa	Known RBP	7.22	□□□□□ -1.25
MRPS28	YDR337W	NAT1	P12945	854 aa	Known RBP	7.22	□□□□□ -1.25
MRPS28	YDR337W	DAL2	P25335	343 aa		7.22	□□□□□ -1.25
MRPS28	YDR337W	HXT1	P32465	570 aa		7.22	□□□□□ -1.25
MRPS28	YDR337W	DUR3	P33413	735 aa		7.22	□□□□□ -1.25
MRPS28	YDR337W	CSG2	P35206	410 aa		7.22	□□□□□ -1.25
MRPS28	YDR337W	TRZ1	P36159	838 aa	Predicted RBP	7.22	□□□□□ -1.25
MRPS28	YDR337W	DAS1	P47005	663 aa		7.22	□□□□□ -1.25
MRPS28	YDR337W	VPS70	P47161	811 aa		7.22	□□□□□ -1.25
MRPS28	YDR337W	RPL4B	P49626	362 aa	Known RBP	7.22	□□□□□ -1.25
MRPS28	YDR337W	VPS72	Q03388	795 aa		7.22	□□□□□ -1.25
MRPS28	YDR337W	YMR114C	Q04471	368 aa	Known RBP	7.22	□□□□□ -1.25
MRPS28	YDR337W	ABP140	Q08641	628 aa	Known RBP	7.22	□□□□□ -1.25
MRPS28	YDR337W	MDM20	Q12387	796 aa	Known RBP	7.22	□□□□□ -1.25
MRPS28	YDR337W	SNF1	P06782	633 aa	Known RBP	7.21	□□□□□ -1.26
MRPS28	YDR337W	ASP3-2	P0CX77	362 aa		7.21	□□□□□ -1.26
MRPS28	YDR337W	ASP3-3	P0CX78	362 aa		7.21	□□□□□ -1.26
MRPS28	YDR337W	ASP3-4	P0CX79	362 aa		7.21	□□□□□ -1.26
MRPS28	YDR337W	ASP3-1	P0CZ17	362 aa		7.21	□□□□□ -1.26
MRPS28	YDR337W	ERG11	P10614	530 aa		7.21	□□□□□ -1.26
MRPS28	YDR337W	CDC42	P19073	191 aa		7.21	□□□□□ -1.26
MRPS28	YDR337W	CKI1	P20485	582 aa		7.21	□□□□□ -1.26
MRPS28	YDR337W	RRT12	P25381	491 aa		7.21	□□□□□ -1.26
MRPS28	YDR337W	TIF11	P38912	153 aa	Known RBP	7.21	□□□□□ -1.26
MRPS28	YDR337W	SMF1	P38925	575 aa		7.21	□□□□□ -1.26
MRPS28	YDR337W	ALD5	P40047	520 aa	Known RBP	7.21	□□□□□ -1.26
MRPS28	YDR337W	SBE2	P42223	864 aa	Known RBP	7.21	□□□□□ -1.26
MRPS28	YDR337W	AZR1	P50080	613 aa		7.21	□□□□□ -1.26
MRPS28	YDR337W	YGR021W	P53212	290 aa		7.21	□□□□□ -1.26
MRPS28	YDR337W	JJJ1	P53863	590 aa		7.21	□□□□□ -1.26
MRPS28	YDR337W	CUS1	Q02554	436 aa	Predicted RBP	7.21	□□□□□ -1.26
MRPS28	YDR337W	NGL3	Q03210	505 aa		7.21	□□□□□ -1.26
MRPS28	YDR337W	SGT2	Q12118	346 aa	Known RBP	7.21	□□□□□ -1.26
MRPS28	YDR337W	WSC3	Q12215	556 aa		7.21	□□□□□ -1.26
MRPS28	YDR337W	NOP58	Q12499	511 aa	Known RBP	7.21	□□□□□ -1.26
MRPS28	YDR337W	COX4	P04037	155 aa		7.2	□□□□□ -1.26
MRPS28	YDR337W	ADE4	P04046	510 aa	Known RBP	7.2	□□□□□ -1.26
MRPS28	YDR337W	GFA1	P14742	717 aa	Known RBP	7.2	□□□□□ -1.26
MRPS28	YDR337W	DPB3	P27344	201 aa		7.2	□□□□□ -1.26
MRPS28	YDR337W	PAH1	P32567	862 aa		7.2	□□□□□ -1.26
MRPS28	YDR337W	RRN6	P32786	894 aa		7.2	□□□□□ -1.26
MRPS28	YDR337W	AIM21	P40563	679 aa		7.2	□□□□□ -1.26
MRPS28	YDR337W	ULI1	P43604	169 aa		7.2	□□□□□ -1.26
MRPS28	YDR337W	PRP31	P49704	494 aa	Predicted RBP	7.2	□□□□□ -1.26
MRPS28	YDR337W	MUK1	Q02866	612 aa		7.2	□□□□□ -1.26
MRPS28	YDR337W	DIG1	Q03063	452 aa	Known RBP	7.2	□□□□□ -1.26
MRPS28	YDR337W	PPM1	Q04081	328 aa		7.2	□□□□□ -1.26
MRPS28	YDR337W	DOT1	Q04089	582 aa	Known RBP	7.2	□□□□□ -1.26
MRPS28	YDR337W	GIS3	Q12418	502 aa		7.2	□□□□□ -1.26
MRPS28	YDR337W	VMA4	P22203	233 aa	Known RBP	7.19	□□□□□ -1.26
MRPS28	YDR337W	STE11	P23561	717 aa		7.19	□□□□□ -1.26
MRPS28	YDR337W	PAP1	P29468	568 aa	Known RBP	7.19	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 75.9 ms