RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W EEB1Q02891 456 aa6.48□□□□□ -1.37
SHP1YBL058W RCR2Q03446 210 aaKnown RBP6.48□□□□□ -1.37
SHP1YBL058W DNL4Q08387 944 aaPredicted RBP6.48□□□□□ -1.37
SHP1YBL058W YOR296WQ08748 1289 aa6.48□□□□□ -1.37
SHP1YBL058W TFB4Q12004 338 aa6.48□□□□□ -1.37
SHP1YBL058W RPL4AP10664 362 aaKnown RBP6.47□□□□□ -1.37
SHP1YBL058W RAM1P22007 431 aa6.47□□□□□ -1.37
SHP1YBL058W RPL4BP49626 362 aaKnown RBP6.47□□□□□ -1.37
SHP1YBL058W CTF18P49956 741 aa6.47□□□□□ -1.37
SHP1YBL058W SHE10P53075 577 aa6.47□□□□□ -1.37
SHP1YBL058W ALG11P53954 548 aaKnown RBP6.47□□□□□ -1.37
SHP1YBL058W LEE1Q02799 301 aaKnown RBP6.47□□□□□ -1.37
SHP1YBL058W TRS130Q03660 1102 aa6.47□□□□□ -1.37
SHP1YBL058W EIS1Q05050 843 aaKnown RBP6.47□□□□□ -1.37
SHP1YBL058W YRR1Q12172 810 aa6.47□□□□□ -1.37
SHP1YBL058W REC8Q12188 680 aa6.47□□□□□ -1.37
SHP1YBL058W MMP1Q12372 583 aa6.47□□□□□ -1.37
SHP1YBL058W OSH2Q12451 1283 aa6.47□□□□□ -1.37
SHP1YBL058W PTC5Q12511 572 aa6.47□□□□□ -1.37
SHP1YBL058W HIS5P07172 385 aa6.46□□□□□ -1.38
SHP1YBL058W MAS1P10507 462 aa6.46□□□□□ -1.38
SHP1YBL058W PFK1P16861 987 aaKnown RBP6.46□□□□□ -1.38
SHP1YBL058W SPO11P23179 398 aa6.46□□□□□ -1.38
SHP1YBL058W HCM1P25364 564 aa6.46□□□□□ -1.38
SHP1YBL058W PGS1P25578 521 aa6.46□□□□□ -1.38
SHP1YBL058W PRR1P28708 518 aa6.46□□□□□ -1.38
SHP1YBL058W PET10P36139 283 aa6.46□□□□□ -1.38
SHP1YBL058W YHL017WP38745 532 aa6.46□□□□□ -1.38
SHP1YBL058W NUP82P40368 713 aa6.46□□□□□ -1.38
SHP1YBL058W GUP1P53154 560 aa6.46□□□□□ -1.38
SHP1YBL058W TAM41P53230 385 aa6.46□□□□□ -1.38
SHP1YBL058W MFB1Q04922 465 aa6.46□□□□□ -1.38
SHP1YBL058W SHS1Q07657 551 aa6.46□□□□□ -1.38
SHP1YBL058W NSE1Q07913 336 aa6.46□□□□□ -1.38
SHP1YBL058W SPE3Q12074 293 aaKnown RBP6.46□□□□□ -1.38
SHP1YBL058W NBL1Q3E7Y6 73 aa6.46□□□□□ -1.38
SHP1YBL058W ALG1P16661 449 aa6.45□□□□□ -1.38
SHP1YBL058W KGD2P19262 463 aaPredicted RBP6.45□□□□□ -1.38
SHP1YBL058W CKA2P19454 339 aa6.45□□□□□ -1.38
SHP1YBL058W PDE1P22434 369 aa6.45□□□□□ -1.38
SHP1YBL058W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38not detected
SHP1YBL058W RPC53P25441 422 aa6.45□□□□□ -1.38
SHP1YBL058W NAM7P30771 971 aaKnown RBP6.45□□□□□ -1.38
SHP1YBL058W SEG2P34250 1132 aa6.45□□□□□ -1.38
SHP1YBL058W ARH1P48360 493 aa6.45□□□□□ -1.38
SHP1YBL058W ORC5P50874 479 aa6.45□□□□□ -1.38
SHP1YBL058W RTC4P53850 401 aa6.45□□□□□ -1.38
SHP1YBL058W VTC3Q02725 835 aa6.45□□□□□ -1.38
SHP1YBL058W CWC21Q03375 135 aaKnown RBP6.45□□□□□ -1.38
SHP1YBL058W FMP25Q08023 583 aa6.45□□□□□ -1.38
SHP1YBL058W PSK2Q08217 1101 aa6.45□□□□□ -1.38
SHP1YBL058W MPC54Q08550 464 aa6.45□□□□□ -1.38
SHP1YBL058W PUS1Q12211 544 aaKnown RBP6.45□□□□□ -1.38
SHP1YBL058W IRA2P19158 3079 aa6.45□□□□□ -1.38
SHP1YBL058W MMS4P38257 691 aa6.44□□□□□ -1.38
SHP1YBL058W SPC98P53540 846 aa6.44□□□□□ -1.38
SHP1YBL058W TOF1P53840 1238 aa6.44□□□□□ -1.38
SHP1YBL058W FAR11P53917 953 aa6.44□□□□□ -1.38
SHP1YBL058W NSE5Q03718 556 aa6.44□□□□□ -1.38
SHP1YBL058W CUR1Q06469 252 aa6.44□□□□□ -1.38
SHP1YBL058W TRP2P00899 507 aaKnown RBP6.43□□□□□ -1.38
SHP1YBL058W RPL40AP0CH08 128 aaKnown RBP6.43□□□□□ -1.38
SHP1YBL058W RPL40BP0CH09 128 aaKnown RBP6.43□□□□□ -1.38
SHP1YBL058W TAF13P11747 167 aa6.43□□□□□ -1.38
SHP1YBL058W SCJ1P25303 377 aa6.43□□□□□ -1.38
SHP1YBL058W SGF29P25554 259 aa6.43□□□□□ -1.38
SHP1YBL058W PEX34P25584 144 aa6.43□□□□□ -1.38
SHP1YBL058W YSC83P32792 385 aa6.43□□□□□ -1.38
SHP1YBL058W RFC5P38251 354 aa6.43□□□□□ -1.38
SHP1YBL058W BIM1P40013 344 aa6.43□□□□□ -1.38
SHP1YBL058W UBA2P52488 636 aa6.43□□□□□ -1.38
SHP1YBL058W STP1Q00947 519 aa6.43□□□□□ -1.38
SHP1YBL058W ADA2Q02336 434 aa6.43□□□□□ -1.38
SHP1YBL058W SNU56Q03782 492 aaKnown RBP6.43□□□□□ -1.38
SHP1YBL058W RPS14AP06367 137 aaKnown RBP6.42□□□□□ -1.38
SHP1YBL058W RNR2P09938 399 aaKnown RBP6.42□□□□□ -1.38
SHP1YBL058W SLY41P22215 453 aa6.42□□□□□ -1.38
SHP1YBL058W PEP7P32609 515 aa6.42□□□□□ -1.38
SHP1YBL058W MNN4P36044 1178 aa6.42□□□□□ -1.38
SHP1YBL058W YBR284WP38150 797 aa6.42□□□□□ -1.38
SHP1YBL058W RGD1P38339 666 aa6.42□□□□□ -1.38
SHP1YBL058W FMO1P38866 432 aa6.42□□□□□ -1.38
SHP1YBL058W RPS14BP39516 138 aaKnown RBP6.42□□□□□ -1.38
SHP1YBL058W SIP5P40210 489 aaKnown RBP6.42□□□□□ -1.38
SHP1YBL058W FYV8P46949 817 aaKnown RBP6.42□□□□□ -1.38
SHP1YBL058W ZAP1P47043 880 aa6.42□□□□□ -1.38
SHP1YBL058W HST2P53686 357 aa6.42□□□□□ -1.38
SHP1YBL058W CAF120P53836 1060 aa6.42□□□□□ -1.38
SHP1YBL058W SFB2P53953 876 aa6.42□□□□□ -1.38
SHP1YBL058W SLG1P54867 378 aa6.42□□□□□ -1.38
SHP1YBL058W SEC5P89102 971 aa6.42□□□□□ -1.38
SHP1YBL058W YDL057WQ07379 328 aa6.42□□□□□ -1.38
SHP1YBL058W APM4Q99186 491 aa6.42□□□□□ -1.38
SHP1YBL058W ACC1Q00955 2233 aaKnown RBP6.41□□□□□ -1.38
SHP1YBL058W GAL80P04387 435 aa6.41□□□□□ -1.38
SHP1YBL058W HOM2P13663 365 aaKnown RBP6.41□□□□□ -1.38
SHP1YBL058W ISY1P21374 235 aaPredicted RBP6.41□□□□□ -1.38
SHP1YBL058W TRM2P33753 639 aa6.41□□□□□ -1.38
SHP1YBL058W YEL1P34225 687 aa6.41□□□□□ -1.38
SHP1YBL058W SNF7P39929 240 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 147.6 ms