RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W DAS2Q12084 232 aa5.96□□□□□ -1.46
PDH1YPR002W FKS1P38631 1876 aaKnown RBP5.95□□□□□ -1.46
PDH1YPR002W GSC2P40989 1895 aa5.95□□□□□ -1.46
PDH1YPR002W CDC8P00572 216 aa5.95□□□□□ -1.46
PDH1YPR002W TOP1P04786 769 aa5.95□□□□□ -1.46
PDH1YPR002W PRP16P15938 1071 aaPredicted RBP5.95□□□□□ -1.46
PDH1YPR002W LCB1P25045 558 aaKnown RBP5.95□□□□□ -1.46
PDH1YPR002W SWE1P32944 819 aa5.95□□□□□ -1.46
PDH1YPR002W PRP40P33203 583 aaKnown RBP5.95□□□□□ -1.46
PDH1YPR002W PTK1P36002 662 aaPredicted RBP5.95□□□□□ -1.46
PDH1YPR002W AHP1P38013 176 aaKnown RBP5.95□□□□□ -1.46
PDH1YPR002W GRS1P38088 690 aaKnown RBP5.95□□□□□ -1.46
PDH1YPR002W PXA1P41909 870 aa5.95□□□□□ -1.46
PDH1YPR002W JJJ2P46997 583 aa5.95□□□□□ -1.46
PDH1YPR002W VTC4P47075 721 aa5.95□□□□□ -1.46
PDH1YPR002W YJR098CP47139 656 aa5.95□□□□□ -1.46
PDH1YPR002W UBA2P52488 636 aa5.95□□□□□ -1.46
PDH1YPR002W TAD1P53065 400 aa5.95□□□□□ -1.46
PDH1YPR002W BTN2P53286 410 aa5.95□□□□□ -1.46
PDH1YPR002W RPT6Q01939 405 aaKnown RBP5.95□□□□□ -1.46
PDH1YPR002W STE23Q06010 1027 aa5.95□□□□□ -1.46
PDH1YPR002W LSO1Q3E827 93 aa5.95□□□□□ -1.46
PDH1YPR002W RAD61Q99359 647 aa5.95□□□□□ -1.46
PDH1YPR002W THR4P16120 514 aaKnown RBP5.94□□□□□ -1.46
PDH1YPR002W SRP54P20424 541 aaKnown RBP5.94□□□□□ -1.46
PDH1YPR002W YSW1P38280 609 aa5.94□□□□□ -1.46
PDH1YPR002W SET5P38890 526 aaKnown RBP5.94□□□□□ -1.46
PDH1YPR002W QDR1P40475 563 aa5.94□□□□□ -1.46
PDH1YPR002W MAD1P40957 749 aa5.94□□□□□ -1.46
PDH1YPR002W SEN54Q02825 467 aaPredicted RBP5.94□□□□□ -1.46
PDH1YPR002W IRC4Q03036 179 aa5.94□□□□□ -1.46
PDH1YPR002W SYF1Q04048 859 aaPredicted RBP5.94□□□□□ -1.46
PDH1YPR002W TRS120Q04183 1289 aa5.94□□□□□ -1.46
PDH1YPR002W YDR338CQ05497 695 aa5.94□□□□□ -1.46
PDH1YPR002W MRD1Q06106 887 aaKnown RBP5.94□□□□□ -1.46
PDH1YPR002W NUC1P08466 329 aa5.93□□□□□ -1.46
PDH1YPR002W RNA1P11745 407 aaKnown RBP5.93□□□□□ -1.46
PDH1YPR002W ISY1P21374 235 aaPredicted RBP5.93□□□□□ -1.46
PDH1YPR002W DAL1P32375 460 aa5.93□□□□□ -1.46
PDH1YPR002W LAS1P36146 502 aaPredicted RBP5.93□□□□□ -1.46
PDH1YPR002W SIC1P38634 284 aa5.93□□□□□ -1.46
PDH1YPR002W VID27P40157 782 aa5.93□□□□□ -1.46
PDH1YPR002W TRS85P46944 698 aa5.93□□□□□ -1.46
PDH1YPR002W VPS72Q03388 795 aa5.93□□□□□ -1.46
PDH1YPR002W UTP4Q06679 776 aaKnown RBP5.93□□□□□ -1.46
PDH1YPR002W DIB1Q06819 143 aaPredicted RBP5.93□□□□□ -1.46
PDH1YPR002W MLH2Q07980 695 aa5.93□□□□□ -1.46
PDH1YPR002W DSE3Q08729 430 aa5.93□□□□□ -1.46
PDH1YPR002W PLP2Q12017 286 aa5.93□□□□□ -1.46
PDH1YPR002W Q0182Q9ZZW1 134 aa5.93□□□□□ -1.46
PDH1YPR002W PYC1P11154 1178 aaKnown RBP5.93□□□□□ -1.46
PDH1YPR002W PMR1P13586 950 aa5.93□□□□□ -1.46
PDH1YPR002W GFA1P14742 717 aaKnown RBP5.93□□□□□ -1.46
PDH1YPR002W MRPL33P20084 86 aa5.93□□□□□ -1.46
PDH1YPR002W PRE10P21242 288 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46not detected
PDH1YPR002W PET10P36139 283 aa5.93□□□□□ -1.46
PDH1YPR002W TOM71P38825 639 aaKnown RBP5.93□□□□□ -1.46
PDH1YPR002W UBP5P39944 805 aa5.93□□□□□ -1.46
PDH1YPR002W MRX1P40050 688 aa5.93□□□□□ -1.46
PDH1YPR002W MDJ2P42834 146 aa5.93□□□□□ -1.46
PDH1YPR002W YFH7P43591 353 aa5.93□□□□□ -1.46
PDH1YPR002W ACF4P47129 309 aa5.93□□□□□ -1.46
PDH1YPR002W RPT4P53549 437 aaKnown RBP5.93□□□□□ -1.46
PDH1YPR002W NSG2P53898 299 aa5.93□□□□□ -1.46
PDH1YPR002W YDR444WQ04093 687 aa5.93□□□□□ -1.46
PDH1YPR002W URH1Q04179 340 aa5.93□□□□□ -1.46
PDH1YPR002W YLR346CQ06139 101 aa5.93□□□□□ -1.46
PDH1YPR002W SPO75Q07798 868 aa5.93□□□□□ -1.46
PDH1YPR002W SDH5Q08230 162 aa5.93□□□□□ -1.46
PDH1YPR002W CIT1P00890 479 aa5.92□□□□□ -1.46
PDH1YPR002W ERG11P10614 530 aa5.92□□□□□ -1.46
PDH1YPR002W GAR1P28007 205 aaKnown RBP5.92□□□□□ -1.46
PDH1YPR002W SEC20P28791 383 aa5.92□□□□□ -1.46
PDH1YPR002W SEC8P32855 1065 aa5.92□□□□□ -1.46
PDH1YPR002W YKL091CP33324 310 aaKnown RBP5.92□□□□□ -1.46
PDH1YPR002W CCT3P39077 534 aaKnown RBP5.92□□□□□ -1.46
PDH1YPR002W YTA6P40328 754 aa5.92□□□□□ -1.46
PDH1YPR002W YJR039WP47107 1121 aa5.92□□□□□ -1.46
PDH1YPR002W CWC22P53333 577 aaKnown RBP5.92□□□□□ -1.46
PDH1YPR002W YNL165WP53891 406 aa5.92□□□□□ -1.46
PDH1YPR002W SLK19Q08581 821 aaKnown RBP5.92□□□□□ -1.46
PDH1YPR002W YPL216WQ08964 1102 aa5.92□□□□□ -1.46
PDH1YPR002W TUF1P02992 437 aaKnown RBP5.91□□□□□ -1.46
PDH1YPR002W YEL076C-AP0CX16 216 aa5.91□□□□□ -1.46
PDH1YPR002W YLR464WP0CX17 216 aa5.91□□□□□ -1.46
PDH1YPR002W OM45P16547 393 aa5.91□□□□□ -1.46
PDH1YPR002W CKA2P19454 339 aa5.91□□□□□ -1.46
PDH1YPR002W CDC10P25342 322 aaKnown RBP5.91□□□□□ -1.46
PDH1YPR002W RPC53P25441 422 aa5.91□□□□□ -1.46
PDH1YPR002W KRE2P27809 442 aa5.91□□□□□ -1.46
PDH1YPR002W MLF3P32047 452 aa5.91□□□□□ -1.46
PDH1YPR002W IRE1P32361 1115 aa5.91□□□□□ -1.46
PDH1YPR002W YHR219WP38900 624 aa5.91□□□□□ -1.46
PDH1YPR002W SMC2P38989 1170 aaKnown RBP5.91□□□□□ -1.46
PDH1YPR002W YEL076CP39971 216 aa5.91□□□□□ -1.46
PDH1YPR002W SPR3P41901 512 aa5.91□□□□□ -1.46
PDH1YPR002W NCS2P53923 493 aaPredicted RBP5.91□□□□□ -1.46
PDH1YPR002W UBP2Q01476 1272 aa5.91□□□□□ -1.46
PDH1YPR002W YMR114CQ04471 368 aaKnown RBP5.91□□□□□ -1.46
PDH1YPR002W ADY4Q05955 493 aa5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms