RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W TSR2Q06672 205 aaKnown RBP4.04□□□□□ -1.76
LCB5YLR260W HSP42Q12329 375 aa4.04□□□□□ -1.76
LCB5YLR260W OSH2Q12451 1283 aa4.04□□□□□ -1.76
LCB5YLR260W TIF6Q12522 245 aaKnown RBP4.04□□□□□ -1.76
LCB5YLR260W SUP35P05453 685 aaKnown RBP4.03□□□□□ -1.76
LCB5YLR260W PFK2P16862 959 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
LCB5YLR260W MRPL33P20084 86 aa4.03□□□□□ -1.76
LCB5YLR260W PLC1P32383 869 aa4.03□□□□□ -1.76
LCB5YLR260W ECM32P32644 1121 aaKnown RBP4.03□□□□□ -1.76
LCB5YLR260W PRS1P32895 427 aaKnown RBP4.03□□□□□ -1.76
LCB5YLR260W SAS3P34218 831 aa4.03□□□□□ -1.76
LCB5YLR260W TRZ1P36159 838 aaPredicted RBP4.03□□□□□ -1.76
LCB5YLR260W RKM3P38222 552 aa4.03□□□□□ -1.76
LCB5YLR260W YNG2P38806 282 aaKnown RBP4.03□□□□□ -1.76
LCB5YLR260W ESL1P40456 1118 aa4.03□□□□□ -1.76
LCB5YLR260W MNT3P40549 630 aa4.03□□□□□ -1.76
LCB5YLR260W VTC2P43585 828 aa4.03□□□□□ -1.76
LCB5YLR260W NUP85P46673 744 aa4.03□□□□□ -1.76
LCB5YLR260W BFA1P47113 574 aa4.03□□□□□ -1.76
LCB5YLR260W SPO75Q07798 868 aa4.03□□□□□ -1.76
LCB5YLR260W FAL1Q12099 399 aaKnown RBP4.03□□□□□ -1.76
LCB5YLR260W APC11Q12157 165 aa4.03□□□□□ -1.76
LCB5YLR260W TY1A-DR3Q12441 440 aa4.03□□□□□ -1.76
LCB5YLR260W APA1P16550 321 aaKnown RBP4.02□□□□□ -1.77
LCB5YLR260W HSP60P19882 572 aaKnown RBP4.02□□□□□ -1.77
LCB5YLR260W RPL8BP29453 256 aaKnown RBP4.02□□□□□ -1.77
LCB5YLR260W MLF3P32047 452 aa4.02□□□□□ -1.77
LCB5YLR260W VPH1P32563 840 aaKnown RBP4.02□□□□□ -1.77
LCB5YLR260W KTR2P33550 425 aa4.02□□□□□ -1.77
LCB5YLR260W PTH2P34222 208 aa4.02□□□□□ -1.77
LCB5YLR260W BSD2P38356 321 aa4.02□□□□□ -1.77
LCB5YLR260W VTC4P47075 721 aa4.02□□□□□ -1.77
LCB5YLR260W YGR016WP53209 190 aa4.02□□□□□ -1.77
LCB5YLR260W CDC55Q00362 526 aa4.02□□□□□ -1.77
LCB5YLR260W YDR341CQ05506 607 aaKnown RBP4.02□□□□□ -1.77
LCB5YLR260W REH1Q06709 432 aa4.02□□□□□ -1.77
LCB5YLR260W ACK1Q07622 623 aaPredicted RBP4.02□□□□□ -1.77
LCB5YLR260W FAP7Q12055 197 aaPredicted RBP4.02□□□□□ -1.77
LCB5YLR260W Q0182Q9ZZW1 134 aa4.02□□□□□ -1.77
LCB5YLR260W PRE9P23638 258 aaKnown RBP4.02□□□□□ -1.77
LCB5YLR260W DAL1P32375 460 aa4.02□□□□□ -1.77
LCB5YLR260W TFC4P33339 1025 aa4.02□□□□□ -1.77
LCB5YLR260W APE3P37302 537 aaKnown RBP4.02□□□□□ -1.77
LCB5YLR260W RXT2P38255 430 aa4.02□□□□□ -1.77
LCB5YLR260W BRE2P43132 505 aa4.02□□□□□ -1.77
LCB5YLR260W RRT6P53117 311 aaPredicted RBP4.02□□□□□ -1.77
LCB5YLR260W LSC2P53312 427 aa4.02□□□□□ -1.77
LCB5YLR260W YNL011CP53980 444 aa4.02□□□□□ -1.77
LCB5YLR260W UGO1Q03327 502 aa4.02□□□□□ -1.77
LCB5YLR260W BUL2Q03758 920 aaKnown RBP4.02□□□□□ -1.77
LCB5YLR260W VTI1Q04338 217 aa4.02□□□□□ -1.77
LCB5YLR260W UTP4Q06679 776 aaKnown RBP4.02□□□□□ -1.77
LCB5YLR260W QCR6P00127 147 aa4.01□□□□□ -1.77
LCB5YLR260W RPS31P05759 152 aaKnown RBP4.01□□□□□ -1.77
LCB5YLR260W BAS1P22035 811 aa4.01□□□□□ -1.77
LCB5YLR260W RAD53P22216 821 aa4.01□□□□□ -1.77
LCB5YLR260W MCM10P32354 571 aa4.01□□□□□ -1.77
LCB5YLR260W STO1P34160 861 aaKnown RBP4.01□□□□□ -1.77
LCB5YLR260W AHP1P38013 176 aaKnown RBP4.01□□□□□ -1.77
LCB5YLR260W SAP185P40856 1058 aa4.01□□□□□ -1.77
LCB5YLR260W RTA1P53047 317 aa4.01□□□□□ -1.77
LCB5YLR260W YNL058CP53947 316 aa4.01□□□□□ -1.77
LCB5YLR260W TUB2P02557 457 aaKnown RBP4.01□□□□□ -1.77
LCB5YLR260W PTP2P29461 750 aa4.01□□□□□ -1.77
LCB5YLR260W MDL2P33311 773 aa4.01□□□□□ -1.77
LCB5YLR260W HSP78P33416 811 aa4.01□□□□□ -1.77
LCB5YLR260W MRPS18P42847 217 aa4.01□□□□□ -1.77
LCB5YLR260W NCS6P53088 359 aa4.01□□□□□ -1.77
LCB5YLR260W RCF1Q03713 159 aa4.01□□□□□ -1.77
LCB5YLR260W SPC19Q03954 165 aa4.01□□□□□ -1.77
LCB5YLR260W RRP9Q06506 573 aaKnown RBP4.01□□□□□ -1.77
LCB5YLR260W PSR2Q07949 397 aa4.01□□□□□ -1.77
LCB5YLR260W YDR056CQ12025 205 aa4.01□□□□□ -1.77
LCB5YLR260W PSF3Q12146 194 aa4.01□□□□□ -1.77
LCB5YLR260W RRP6Q12149 733 aaKnown RBP4.01□□□□□ -1.77
LCB5YLR260W MED1Q12321 566 aa4.01□□□□□ -1.77
LCB5YLR260W HSP82P02829 709 aaKnown RBP4□□□□□ -1.77
LCB5YLR260W TPM1P17536 199 aaKnown RBP4□□□□□ -1.77
LCB5YLR260W ADP1P25371 1049 aa4□□□□□ -1.77
LCB5YLR260W VMA3P25515 160 aa4□□□□□ -1.77
LCB5YLR260W KRR1P25586 316 aaPredicted RBP4□□□□□ -1.77
LCB5YLR260W CHS3P29465 1165 aa4□□□□□ -1.77
LCB5YLR260W DBF20P32328 564 aa4□□□□□ -1.77
LCB5YLR260W IRE1P32361 1115 aa4□□□□□ -1.77
LCB5YLR260W NUP120P35729 1037 aa4□□□□□ -1.77
LCB5YLR260W CAJ1P39101 391 aa4□□□□□ -1.77
LCB5YLR260W HSV2P50079 448 aaPredicted RBP4□□□□□ -1.77
LCB5YLR260W MAL11P53048 616 aa4□□□□□ -1.77
LCB5YLR260W PIB2P53191 635 aa4□□□□□ -1.77
LCB5YLR260W RBA50Q04418 439 aa4□□□□□ -1.77
LCB5YLR260W DAL4Q04895 635 aa4□□□□□ -1.77
LCB5YLR260W HEL2Q05580 639 aaKnown RBP4□□□□□ -1.77
LCB5YLR260W YLR257WQ06146 321 aaKnown RBP4□□□□□ -1.77
LCB5YLR260W NOC3Q07896 663 aaPredicted RBP4□□□□□ -1.77
LCB5YLR260W TRE2Q08693 809 aa4□□□□□ -1.77
LCB5YLR260W MCD1Q12158 566 aa4□□□□□ -1.77
LCB5YLR260W PMA1P05030 918 aaKnown RBP3.99□□□□□ -1.77
LCB5YLR260W AAD3P25612 363 aa3.99□□□□□ -1.77
LCB5YLR260W CIC1P38779 376 aaKnown RBP3.99□□□□□ -1.77
LCB5YLR260W EAF1Q06337 982 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 131.4 ms