RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W SIP3P38717 1229 aa5.03□□□□□ -1.6
CBF5YLR175W FYV10P40492 516 aa5.03□□□□□ -1.6
CBF5YLR175W FIS1P40515 155 aa5.03□□□□□ -1.6
CBF5YLR175W CTR1P49573 406 aa5.03□□□□□ -1.6
CBF5YLR175W ACS2P52910 683 aaKnown RBP5.03□□□□□ -1.6
CBF5YLR175W HUL5P53119 910 aa5.03□□□□□ -1.6
CBF5YLR175W DIP5P53388 608 aa5.03□□□□□ -1.6
CBF5YLR175W DUS1P53759 423 aaKnown RBP5.03□□□□□ -1.6
CBF5YLR175W PGA2P53903 129 aa5.03□□□□□ -1.6
CBF5YLR175W SLD5Q03406 294 aa5.03□□□□□ -1.6
CBF5YLR175W GFD1Q04839 188 aaKnown RBP5.03□□□□□ -1.6
CBF5YLR175W YMR321CQ04898 105 aa5.03□□□□□ -1.6
CBF5YLR175W HCR1Q05775 265 aaKnown RBP5.03□□□□□ -1.6
CBF5YLR175W CUR1Q06469 252 aa5.03□□□□□ -1.6
CBF5YLR175W CRD1Q07560 283 aa5.03□□□□□ -1.6
CBF5YLR175W TSC13Q99190 310 aa5.03□□□□□ -1.6
CBF5YLR175W TCP1P12612 559 aaKnown RBP5.02□□□□□ -1.61
CBF5YLR175W PFK1P16861 987 aaKnown RBP5.02□□□□□ -1.61
CBF5YLR175W PRE10P21242 288 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
CBF5YLR175W RME1P32338 300 aaKnown RBP5.02□□□□□ -1.61
CBF5YLR175W NOC2P39744 710 aaKnown RBP5.02□□□□□ -1.61
CBF5YLR175W HUL4P40985 892 aa5.02□□□□□ -1.61
CBF5YLR175W VPS53P47061 822 aa5.02□□□□□ -1.61
CBF5YLR175W UBP15P50101 1230 aa5.02□□□□□ -1.61
CBF5YLR175W VID30P53076 958 aa5.02□□□□□ -1.61
CBF5YLR175W GUP1P53154 560 aa5.02□□□□□ -1.61
CBF5YLR175W MDR1P53258 950 aa5.02□□□□□ -1.61
CBF5YLR175W WAR1Q03631 944 aa5.02□□□□□ -1.61
CBF5YLR175W SPP382Q06411 708 aaPredicted RBP5.02□□□□□ -1.61
CBF5YLR175W MET7Q08645 548 aa5.02□□□□□ -1.61
CBF5YLR175W AFT2Q08957 416 aa5.02□□□□□ -1.61
CBF5YLR175W ICL2Q12031 575 aa5.02□□□□□ -1.61
CBF5YLR175W TRM11Q12463 433 aa5.02□□□□□ -1.61
CBF5YLR175W PCK1P10963 549 aa5.01□□□□□ -1.61
CBF5YLR175W YUR1P26725 428 aa5.01□□□□□ -1.61
CBF5YLR175W KIP2P28743 706 aa5.01□□□□□ -1.61
CBF5YLR175W EBP2P36049 427 aaKnown RBP5.01□□□□□ -1.61
CBF5YLR175W MIC60P36112 540 aa5.01□□□□□ -1.61
CBF5YLR175W PIH1P38768 344 aa5.01□□□□□ -1.61
CBF5YLR175W YFL034WP43564 1073 aa5.01□□□□□ -1.61
CBF5YLR175W AIP1P46680 615 aaKnown RBP5.01□□□□□ -1.61
CBF5YLR175W YGR237CP50089 785 aa5.01□□□□□ -1.61
CBF5YLR175W ROM1P53046 1155 aa5.01□□□□□ -1.61
CBF5YLR175W NCS6P53088 359 aa5.01□□□□□ -1.61
CBF5YLR175W SSL2Q00578 843 aa5.01□□□□□ -1.61
CBF5YLR175W COG4Q06096 861 aa5.01□□□□□ -1.61
CBF5YLR175W MSC6Q08818 692 aaKnown RBP5.01□□□□□ -1.61
CBF5YLR175W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
CBF5YLR175W TCO89Q08921 799 aa5.01□□□□□ -1.61
CBF5YLR175W PGM2P37012 569 aaKnown RBP5□□□□□ -1.61
CBF5YLR175W PSY4P38193 441 aa5□□□□□ -1.61
CBF5YLR175W YEL025CP39991 1188 aa5□□□□□ -1.61
CBF5YLR175W RPN3P40016 523 aaKnown RBP5□□□□□ -1.61
CBF5YLR175W YGL039WP53183 348 aaKnown RBP5□□□□□ -1.61
CBF5YLR175W CAF130P53280 1122 aaPredicted RBP5□□□□□ -1.61
CBF5YLR175W ROD1Q02805 837 aa5□□□□□ -1.61
CBF5YLR175W EBS1Q03466 884 aaKnown RBP5□□□□□ -1.61
CBF5YLR175W ISR1Q06098 443 aaKnown RBP5□□□□□ -1.61
CBF5YLR175W YDL057WQ07379 328 aa5□□□□□ -1.61
CBF5YLR175W TLG2Q08144 397 aa5□□□□□ -1.61
CBF5YLR175W POX1P13711 748 aa5□□□□□ -1.61
CBF5YLR175W OM45P16547 393 aa5□□□□□ -1.61
CBF5YLR175W MRC1P25588 1096 aa5□□□□□ -1.61
CBF5YLR175W HEM3P28789 327 aa5□□□□□ -1.61
CBF5YLR175W YKL091CP33324 310 aaKnown RBP5□□□□□ -1.61
CBF5YLR175W SAP190P36123 1033 aa5□□□□□ -1.61
CBF5YLR175W PXL1P36166 706 aa5□□□□□ -1.61
CBF5YLR175W PPS1P38148 807 aa5□□□□□ -1.61
CBF5YLR175W UBP13P38187 747 aa5□□□□□ -1.61
CBF5YLR175W LSC2P53312 427 aa5□□□□□ -1.61
CBF5YLR175W NCS2P53923 493 aaPredicted RBP5□□□□□ -1.61
CBF5YLR175W ARK1P53974 638 aa5□□□□□ -1.61
CBF5YLR175W COQ9Q05779 260 aa5□□□□□ -1.61
CBF5YLR175W SMC5Q08204 1093 aa5□□□□□ -1.61
CBF5YLR175W TMA16Q08687 178 aa5□□□□□ -1.61
CBF5YLR175W YPL277CQ08989 487 aa5□□□□□ -1.61
CBF5YLR175W MED1Q12321 566 aa5□□□□□ -1.61
CBF5YLR175W ECM29P38737 1868 aa4.99□□□□□ -1.61
CBF5YLR175W CDC37P06101 506 aaKnown RBP4.99□□□□□ -1.61
CBF5YLR175W SPO11P23179 398 aa4.99□□□□□ -1.61
CBF5YLR175W KIN82P25341 720 aa4.99□□□□□ -1.61
CBF5YLR175W RPC53P25441 422 aa4.99□□□□□ -1.61
CBF5YLR175W MCM2P29469 868 aa4.99□□□□□ -1.61
CBF5YLR175W PSO2P30620 661 aa4.99□□□□□ -1.61
CBF5YLR175W YSC83P32792 385 aa4.99□□□□□ -1.61
CBF5YLR175W COT1P32798 439 aa4.99□□□□□ -1.61
CBF5YLR175W VPS35P34110 944 aa4.99□□□□□ -1.61
CBF5YLR175W ATG19P35193 415 aa4.99□□□□□ -1.61
CBF5YLR175W EFM2P38347 419 aa4.99□□□□□ -1.61
CBF5YLR175W ULP2P40537 1034 aaPredicted RBP4.99□□□□□ -1.61
CBF5YLR175W AIM21P40563 679 aa4.99□□□□□ -1.61
CBF5YLR175W RPS7BP48164 190 aaKnown RBP4.99□□□□□ -1.61
CBF5YLR175W NBP1P52919 319 aaPredicted RBP4.99□□□□□ -1.61
CBF5YLR175W SYH1Q02875 849 aaKnown RBP4.99□□□□□ -1.61
CBF5YLR175W YBL113CQ7M4S9 792 aa4.99□□□□□ -1.61
CBF5YLR175W DED1P06634 604 aaKnown RBP4.98□□□□□ -1.61
CBF5YLR175W PHO8P11491 566 aa4.98□□□□□ -1.61
CBF5YLR175W PHO13P19881 312 aa4.98□□□□□ -1.61
CBF5YLR175W DBP5P20449 482 aaKnown RBP4.98□□□□□ -1.61
CBF5YLR175W VAN1P23642 535 aa4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 62 ms