RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC97YHR172W DBP9Q06218 594 aaKnown RBP5.84□□□□□ -1.47
SPC97YHR172W MLH2Q07980 695 aa5.84□□□□□ -1.47
SPC97YHR172W CLP1Q08685 445 aaPredicted RBP5.84□□□□□ -1.47
SPC97YHR172W MSH1P25846 959 aa5.84□□□□□ -1.48
SPC97YHR172W MDL1P33310 695 aa5.84□□□□□ -1.48
SPC97YHR172W SQT1P35184 431 aa5.84□□□□□ -1.48
SPC97YHR172W MAP2P38174 421 aaKnown RBP5.84□□□□□ -1.48
SPC97YHR172W HSM3P38348 480 aa5.84□□□□□ -1.48
SPC97YHR172W TIF5P38431 405 aaKnown RBP5.84□□□□□ -1.48
SPC97YHR172W RGD2P43556 714 aa5.84□□□□□ -1.48
SPC97YHR172W MAD3P47074 515 aa5.84□□□□□ -1.48
SPC97YHR172W AIM14P53109 570 aa5.84□□□□□ -1.48
SPC97YHR172W YGL140CP53120 1219 aa5.84□□□□□ -1.48
SPC97YHR172W HIM1Q06674 414 aa5.84□□□□□ -1.48
SPC97YHR172W APL4Q12028 832 aa5.84□□□□□ -1.48
SPC97YHR172W SFI1Q12369 946 aa5.84□□□□□ -1.48
SPC97YHR172W INO1P11986 533 aa5.83□□□□□ -1.48
SPC97YHR172W NUD1P32336 851 aa5.83□□□□□ -1.48
SPC97YHR172W DLD1P32891 587 aa5.83□□□□□ -1.48
SPC97YHR172W ARC19P33204 171 aaKnown RBP5.83□□□□□ -1.48
SPC97YHR172W XRS2P33301 854 aa5.83□□□□□ -1.48
SPC97YHR172W SLC1P33333 303 aa5.83□□□□□ -1.48
SPC97YHR172W DID4P36108 232 aa5.83□□□□□ -1.48
SPC97YHR172W FIR1P40020 876 aa5.83□□□□□ -1.48
SPC97YHR172W RMD8P43620 662 aa5.83□□□□□ -1.48
SPC97YHR172W POL31P46957 487 aa5.83□□□□□ -1.48
SPC97YHR172W RSM26P47141 266 aa5.83□□□□□ -1.48
SPC97YHR172W YGR250CP53316 781 aaKnown RBP5.83□□□□□ -1.48
SPC97YHR172W SIW14P53965 281 aa5.83□□□□□ -1.48
SPC97YHR172W VHS3Q08438 674 aa5.83□□□□□ -1.48
SPC97YHR172W RUD3Q12234 484 aaKnown RBP5.83□□□□□ -1.48
SPC97YHR172W BI4P03879 638 aa5.83□□□□□ -1.48
SPC97YHR172W HTA1P04911 132 aaKnown RBP5.83□□□□□ -1.48
SPC97YHR172W HTA2P04912 132 aa5.83□□□□□ -1.48
SPC97YHR172W SEC23P15303 768 aaKnown RBP5.83□□□□□ -1.48
SPC97YHR172W VAC17P25591 423 aa5.83□□□□□ -1.48
SPC97YHR172W LDH1P38139 375 aa5.83□□□□□ -1.48
SPC97YHR172W SPT8P38915 602 aa5.83□□□□□ -1.48
SPC97YHR172W RGA1P39083 1007 aa5.83□□□□□ -1.48
SPC97YHR172W YJL068CP40363 299 aa5.83□□□□□ -1.48
SPC97YHR172W ALG2P43636 503 aa5.83□□□□□ -1.48
SPC97YHR172W COG8Q04632 607 aa5.83□□□□□ -1.48
SPC97YHR172W PCL8Q08966 492 aa5.83□□□□□ -1.48
SPC97YHR172W PGA3Q12746 312 aaKnown RBP5.83□□□□□ -1.48
SPC97YHR172W MER1P16523 270 aa5.82□□□□□ -1.48
SPC97YHR172W SEC21P32074 935 aaKnown RBP5.82□□□□□ -1.48
SPC97YHR172W YKU70P32807 602 aa5.82□□□□□ -1.48
SPC97YHR172W MBP1P39678 833 aa5.82□□□□□ -1.48
SPC97YHR172W RVS167P39743 482 aaKnown RBP5.82□□□□□ -1.48
SPC97YHR172W DPH1P40487 425 aaKnown RBP5.82□□□□□ -1.48
SPC97YHR172W SMK1P41808 388 aa5.82□□□□□ -1.48
SPC97YHR172W CIR1P42940 261 aa5.82□□□□□ -1.48
SPC97YHR172W YJL055WP47044 245 aa5.82□□□□□ -1.48
SPC97YHR172W ENT3P47160 408 aa5.82□□□□□ -1.48
SPC97YHR172W MNP1P53163 194 aaPredicted RBP5.82□□□□□ -1.48
SPC97YHR172W SKY1Q03656 742 aa5.82□□□□□ -1.48
SPC97YHR172W MRPL25P23369 157 aa5.82□□□□□ -1.48
SPC97YHR172W ATG19P35193 415 aa5.82□□□□□ -1.48
SPC97YHR172W MCD4P36051 919 aa5.82□□□□□ -1.48
SPC97YHR172W RPC37P36121 282 aa5.82□□□□□ -1.48
SPC97YHR172W CCL1P37366 393 aa5.82□□□□□ -1.48
SPC97YHR172W YBR284WP38150 797 aa5.82□□□□□ -1.48
SPC97YHR172W PCM1P38628 557 aaKnown RBP5.82□□□□□ -1.48
SPC97YHR172W PAN5P38787 379 aa5.82□□□□□ -1.48
SPC97YHR172W KHA1P40309 873 aa5.82□□□□□ -1.48
SPC97YHR172W SEC28P40509 296 aaKnown RBP5.82□□□□□ -1.48
SPC97YHR172W CIT3P43635 486 aa5.82□□□□□ -1.48
SPC97YHR172W TEP1P53916 434 aa5.82□□□□□ -1.48
SPC97YHR172W CEG1Q01159 459 aaPredicted RBP5.82□□□□□ -1.48
SPC97YHR172W PEX25Q02969 394 aa5.82□□□□□ -1.48
SPC97YHR172W FDC1Q03034 503 aa5.82□□□□□ -1.48
SPC97YHR172W ISA2Q12425 185 aa5.82□□□□□ -1.48
SPC97YHR172W MNE1P24720 663 aa5.81□□□□□ -1.48
SPC97YHR172W MSH3P25336 1018 aa5.81□□□□□ -1.48
SPC97YHR172W IRE1P32361 1115 aa5.81□□□□□ -1.48
SPC97YHR172W CBF2P32504 956 aa5.81□□□□□ -1.48
SPC97YHR172W MIC60P36112 540 aa5.81□□□□□ -1.48
SPC97YHR172W SHM2P37291 469 aaKnown RBP5.81□□□□□ -1.48
SPC97YHR172W CCZ1P38273 704 aa5.81□□□□□ -1.48
SPC97YHR172W RFC1P38630 861 aaKnown RBP5.81□□□□□ -1.48
SPC97YHR172W IMA5P40884 581 aa5.81□□□□□ -1.48
SPC97YHR172W AGX1P43567 385 aa5.81□□□□□ -1.48
SPC97YHR172W CIK1Q01649 594 aa5.81□□□□□ -1.48
SPC97YHR172W YMR155WQ03795 547 aa5.81□□□□□ -1.48
SPC97YHR172W PHR1P05066 565 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
SPC97YHR172W PDC1P06169 563 aaKnown RBP5.81□□□□□ -1.48
SPC97YHR172W STE6P12866 1290 aa5.81□□□□□ -1.48
SPC97YHR172W MSD1P15179 658 aaKnown RBP5.81□□□□□ -1.48
SPC97YHR172W YKL107WP34251 309 aa5.81□□□□□ -1.48
SPC97YHR172W YGR153WP48238 217 aa5.81□□□□□ -1.48
SPC97YHR172W YPL071CQ02864 156 aa5.81□□□□□ -1.48
SPC97YHR172W ATG38Q05789 226 aaKnown RBP5.81□□□□□ -1.48
SPC97YHR172W ECM38Q05902 660 aaPredicted RBP5.81□□□□□ -1.48
SPC97YHR172W NFI1Q12216 726 aa5.81□□□□□ -1.48
SPC97YHR172W PAR32Q12515 295 aaKnown RBP5.81□□□□□ -1.48
SPC97YHR172W CKA1P15790 372 aa5.8□□□□□ -1.48
SPC97YHR172W PFK2P16862 959 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
SPC97YHR172W CBP3P21560 335 aa5.8□□□□□ -1.48
SPC97YHR172W MSN1P22148 382 aa5.8□□□□□ -1.48
SPC97YHR172W PET10P36139 283 aa5.8□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 81.9 ms