RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeastyeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD3YHR170W POB3Q04636 552 aaKnown RBP5.21□□□□□ -1.58
NMD3YHR170W ELG1Q12050 791 aa5.21□□□□□ -1.58
NMD3YHR170W SAC7P17121 654 aa5.2□□□□□ -1.58
NMD3YHR170W RER2P35196 286 aa5.2□□□□□ -1.58
NMD3YHR170W SKI2P35207 1287 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
NMD3YHR170W YKL077WP36081 392 aa5.2□□□□□ -1.58
NMD3YHR170W STV1P37296 890 aa5.2□□□□□ -1.58
NMD3YHR170W MCX1P38323 520 aaPredicted RBP5.2□□□□□ -1.58
NMD3YHR170W PMC1P38929 1173 aaPredicted RBP5.2□□□□□ -1.58
NMD3YHR170W SLN1P39928 1220 aaPredicted RBP5.2□□□□□ -1.58
NMD3YHR170W SPO22P40511 975 aa5.2□□□□□ -1.58
NMD3YHR170W EPL1P43572 832 aa5.2□□□□□ -1.58
NMD3YHR170W PIP2P52960 996 aa5.2□□□□□ -1.58
NMD3YHR170W BUD9P53226 547 aa5.2□□□□□ -1.58
NMD3YHR170W EAF7P53911 425 aaKnown RBP5.2□□□□□ -1.58
NMD3YHR170W VPS16Q03308 798 aa5.2□□□□□ -1.58
NMD3YHR170W RRG1Q12167 365 aaPredicted RBP5.2□□□□□ -1.58
NMD3YHR170W TY1A-NL1Q12391 440 aaKnown RBP5.2□□□□□ -1.58
NMD3YHR170W RPL19AP0CX82 189 aaKnown RBP5.19□□□□□ -1.58
NMD3YHR170W RPL19BP0CX83 189 aaPredicted RBP5.19□□□□□ -1.58
NMD3YHR170W TPM1P17536 199 aaKnown RBP5.19□□□□□ -1.58
NMD3YHR170W PET112P33893 541 aa5.19□□□□□ -1.58
NMD3YHR170W SQS1P53866 767 aaKnown RBP5.19□□□□□ -1.58
NMD3YHR170W RPS15Q01855 142 aaKnown RBP5.19□□□□□ -1.58
NMD3YHR170W SPN1Q06505 410 aaPredicted RBP5.19□□□□□ -1.58
NMD3YHR170W SSF2Q12153 453 aaPredicted RBP5.19□□□□□ -1.58
NMD3YHR170W LSP1Q12230 341 aaKnown RBP5.19□□□□□ -1.58
NMD3YHR170W BIK1P11709 440 aa5.18□□□□□ -1.58
NMD3YHR170W YCK2P23292 546 aaKnown RBP5.18□□□□□ -1.58
NMD3YHR170W MAE1P36013 669 aaKnown RBP5.18□□□□□ -1.58
NMD3YHR170W CRG1P38892 291 aaRIP-Chip data5.18□□□□□ -1.58not detected
NMD3YHR170W SHU2P38957 223 aa5.18□□□□□ -1.58
NMD3YHR170W SHC1P39000 512 aa5.18□□□□□ -1.58
NMD3YHR170W TPM2P40414 161 aa5.18□□□□□ -1.58
NMD3YHR170W GCV1P48015 400 aa5.18□□□□□ -1.58
NMD3YHR170W VPS4P52917 437 aa5.18□□□□□ -1.58
NMD3YHR170W DSE4P53753 1117 aa5.18□□□□□ -1.58
NMD3YHR170W UTP5Q04177 643 aaKnown RBP5.18□□□□□ -1.58
NMD3YHR170W HRQ1Q05549 1077 aa5.18□□□□□ -1.58
NMD3YHR170W HDA2Q06629 674 aa5.18□□□□□ -1.58
NMD3YHR170W CDC53Q12018 815 aaKnown RBP5.18□□□□□ -1.58
NMD3YHR170W PIN2Q12057 282 aa5.18□□□□□ -1.58
NMD3YHR170W PSF3Q12146 194 aa5.18□□□□□ -1.58
NMD3YHR170W CPA2P03965 1118 aaKnown RBP5.17□□□□□ -1.58
NMD3YHR170W MSP1P28737 362 aa5.17□□□□□ -1.58
NMD3YHR170W PRO3P32263 286 aaKnown RBP5.17□□□□□ -1.58
NMD3YHR170W MNR2P35724 969 aa5.17□□□□□ -1.58
NMD3YHR170W RTS1P38903 757 aa5.17□□□□□ -1.58
NMD3YHR170W AKR1P39010 764 aa5.17□□□□□ -1.58
NMD3YHR170W VID27P40157 782 aa5.17□□□□□ -1.58
NMD3YHR170W PRY1P47032 299 aa5.17□□□□□ -1.58
NMD3YHR170W HXT15P54854 567 aa5.17□□□□□ -1.58
NMD3YHR170W TRM44Q02648 567 aaKnown RBP5.17□□□□□ -1.58
NMD3YHR170W MRD1Q06106 887 aaKnown RBP5.17□□□□□ -1.58
NMD3YHR170W EST2Q06163 884 aa5.17□□□□□ -1.58
NMD3YHR170W ALG6Q12001 544 aaKnown RBP5.17□□□□□ -1.58
NMD3YHR170W MATALPHA2P0CY08 210 aa5.16□□□□□ -1.58
NMD3YHR170W HMLALPHA2P0CY09 210 aa5.16□□□□□ -1.58
NMD3YHR170W CDC34P14682 295 aa5.16□□□□□ -1.58
NMD3YHR170W HCA4P20448 770 aaKnown RBP5.16□□□□□ -1.58
NMD3YHR170W VMA4P22203 233 aaKnown RBP5.16□□□□□ -1.58
NMD3YHR170W MBR1P23493 339 aa5.16□□□□□ -1.58
NMD3YHR170W ROX1P25042 368 aa5.16□□□□□ -1.58
NMD3YHR170W ANP1P32629 500 aa5.16□□□□□ -1.58
NMD3YHR170W PRX1P34227 261 aaKnown RBP5.16□□□□□ -1.58
NMD3YHR170W REI1P38344 393 aaPredicted RBP5.16□□□□□ -1.58
NMD3YHR170W BDH2P39713 417 aa5.16□□□□□ -1.58
NMD3YHR170W SNF7P39929 240 aaKnown RBP5.16□□□□□ -1.58
NMD3YHR170W CSM2P40465 213 aa5.16□□□□□ -1.58
NMD3YHR170W YKE2P52553 114 aa5.16□□□□□ -1.58
NMD3YHR170W NCE103P53615 221 aa5.16□□□□□ -1.58
NMD3YHR170W RPN4Q03465 531 aa5.16□□□□□ -1.58
NMD3YHR170W TFC6Q06339 672 aa5.16□□□□□ -1.58
NMD3YHR170W YPL260WQ08977 551 aa5.16□□□□□ -1.58
NMD3YHR170W KEL3Q08979 651 aaPredicted RBP5.16□□□□□ -1.58
NMD3YHR170W YDR215CQ12240 137 aa5.16□□□□□ -1.58
NMD3YHR170W YOR131CQ12486 218 aa5.16□□□□□ -1.58
NMD3YHR170W YGR161W-CQ3E744 92 aa5.16□□□□□ -1.58
NMD3YHR170W MYO1P08964 1928 aa5.16□□□□□ -1.58
NMD3YHR170W STI1P15705 589 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
NMD3YHR170W ACE2P21192 770 aa5.16□□□□□ -1.58
NMD3YHR170W RIT1P23796 513 aa5.16□□□□□ -1.58
NMD3YHR170W MYO3P36006 1272 aa5.16□□□□□ -1.58
NMD3YHR170W ARL1P38116 183 aaKnown RBP5.16□□□□□ -1.58
NMD3YHR170W PBP2P38151 413 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
NMD3YHR170W MTC3P53077 123 aa5.16□□□□□ -1.58
NMD3YHR170W MRL1Q06815 381 aa5.16□□□□□ -1.58
NMD3YHR170W ACK1Q07622 623 aaPredicted RBP5.16□□□□□ -1.58
NMD3YHR170W RAD61Q99359 647 aa5.16□□□□□ -1.58
NMD3YHR170W AI3P03877 415 aa5.15□□□□□ -1.59
NMD3YHR170W MSM1P22438 575 aa5.15□□□□□ -1.59
NMD3YHR170W RFC5P38251 354 aa5.15□□□□□ -1.59
NMD3YHR170W MNN1P39106 762 aa5.15□□□□□ -1.59
NMD3YHR170W CIR1P42940 261 aa5.15□□□□□ -1.59
NMD3YHR170W SPO74P45819 413 aa5.15□□□□□ -1.59
NMD3YHR170W YGR045CP53229 120 aa5.15□□□□□ -1.59
NMD3YHR170W ROD1Q02805 837 aa5.15□□□□□ -1.59
NMD3YHR170W YLR407WQ06070 228 aa5.15□□□□□ -1.59
NMD3YHR170W PEX19Q07418 342 aa5.15□□□□□ -1.59
NMD3YHR170W RTT10Q08924 1013 aa5.15□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 101.1 ms