RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W SRD1P09007 221 aa8.06□□□□□ -1.12
PEX28YHR150W RNA1P11745 407 aaKnown RBP8.06□□□□□ -1.12
PEX28YHR150W PSE1P32337 1089 aaKnown RBP8.06□□□□□ -1.12
PEX28YHR150W PNT1P38969 423 aa8.06□□□□□ -1.12
PEX28YHR150W PEA2P40091 420 aa8.06□□□□□ -1.12
PEX28YHR150W PXA1P41909 870 aa8.06□□□□□ -1.12
PEX28YHR150W BRE2P43132 505 aa8.06□□□□□ -1.12
PEX28YHR150W ATG36P46983 293 aa8.06□□□□□ -1.12
PEX28YHR150W FUS2Q05670 677 aa8.06□□□□□ -1.12
PEX28YHR150W SSA1P10591 642 aaKnown RBP8.06□□□□□ -1.12
PEX28YHR150W PRP9P19736 530 aaKnown RBP8.06□□□□□ -1.12
PEX28YHR150W ESS1P22696 170 aa8.06□□□□□ -1.12
PEX28YHR150W CDC48P25694 835 aaKnown RBP8.06□□□□□ -1.12
PEX28YHR150W VAB2P40003 282 aa8.06□□□□□ -1.12
PEX28YHR150W YLR297WQ05899 129 aa8.06□□□□□ -1.12
PEX28YHR150W CRD1Q07560 283 aa8.06□□□□□ -1.12
PEX28YHR150W RIO1Q12196 484 aaKnown RBP8.06□□□□□ -1.12
PEX28YHR150W FKS1P38631 1876 aaKnown RBP8.05□□□□□ -1.12
PEX28YHR150W SWI6P09959 803 aa8.05□□□□□ -1.12
PEX28YHR150W PYC1P11154 1178 aaKnown RBP8.05□□□□□ -1.12
PEX28YHR150W PER1P25625 357 aa8.05□□□□□ -1.12
PEX28YHR150W NAM7P30771 971 aaKnown RBP8.05□□□□□ -1.12
PEX28YHR150W SHP1P34223 423 aa8.05□□□□□ -1.12
PEX28YHR150W YEL1P34225 687 aa8.05□□□□□ -1.12
PEX28YHR150W OAF3P36023 863 aa8.05□□□□□ -1.12
PEX28YHR150W CDC27P38042 758 aa8.05□□□□□ -1.12
PEX28YHR150W YSW1P38280 609 aa8.05□□□□□ -1.12
PEX28YHR150W SDS3P40505 327 aa8.05□□□□□ -1.12
PEX28YHR150W HXT8P40886 569 aa8.05□□□□□ -1.12
PEX28YHR150W ALD6P54115 500 aaKnown RBP8.05□□□□□ -1.12
PEX28YHR150W SPH1Q06160 661 aa8.05□□□□□ -1.12
PEX28YHR150W YPL277CQ08989 487 aa8.05□□□□□ -1.12
PEX28YHR150W AIM41Q12032 185 aa8.05□□□□□ -1.12
PEX28YHR150W SPO21Q12411 609 aa8.05□□□□□ -1.12
PEX28YHR150W PGK1P00560 416 aaKnown RBP8.04□□□□□ -1.12
PEX28YHR150W SUV3P32580 737 aa8.04□□□□□ -1.12
PEX28YHR150W TGL1P34163 548 aa8.04□□□□□ -1.12
PEX28YHR150W ATG19P35193 415 aa8.04□□□□□ -1.12
PEX28YHR150W YKL050CP35736 922 aa8.04□□□□□ -1.12
PEX28YHR150W UBP11P36026 717 aa8.04□□□□□ -1.12
PEX28YHR150W YKR018CP36114 725 aa8.04□□□□□ -1.12
PEX28YHR150W RCK2P38623 610 aa8.04□□□□□ -1.12
PEX28YHR150W MRX1P40050 688 aa8.04□□□□□ -1.12
PEX28YHR150W KAP123P40069 1113 aaKnown RBP8.04□□□□□ -1.12
PEX28YHR150W LCP5P40079 357 aaPredicted RBP8.04□□□□□ -1.12
PEX28YHR150W GPD2P41911 440 aaKnown RBP8.04□□□□□ -1.12
PEX28YHR150W NMD5P46970 1048 aa8.04□□□□□ -1.12
PEX28YHR150W YJR039WP47107 1121 aa8.04□□□□□ -1.12
PEX28YHR150W JJJ1P53863 590 aa8.04□□□□□ -1.12
PEX28YHR150W PHM6Q05637 104 aa8.04□□□□□ -1.12
PEX28YHR150W DUS3Q06053 668 aaKnown RBP8.04□□□□□ -1.12
PEX28YHR150W UBX5Q06682 500 aa8.04□□□□□ -1.12
PEX28YHR150W WHI4Q07655 649 aaKnown RBP8.04□□□□□ -1.12
PEX28YHR150W YDJ1P25491 409 aaKnown RBP8.03□□□□□ -1.12
PEX28YHR150W UBP13P38187 747 aa8.03□□□□□ -1.12
PEX28YHR150W BRO1P48582 844 aa8.03□□□□□ -1.12
PEX28YHR150W YGL039WP53183 348 aaKnown RBP8.03□□□□□ -1.12
PEX28YHR150W NCS2P53923 493 aaPredicted RBP8.03□□□□□ -1.12
PEX28YHR150W USA1Q03714 838 aa8.03□□□□□ -1.12
PEX28YHR150W YMR018WQ04364 514 aa8.03□□□□□ -1.12
PEX28YHR150W PIG1Q06216 648 aa8.03□□□□□ -1.12
PEX28YHR150W TY1B-AO13527 1196 aaKnown RBP8.03□□□□□ -1.12
PEX28YHR150W VMA2P16140 517 aaKnown RBP8.03□□□□□ -1.12
PEX28YHR150W DBP5P20449 482 aaKnown RBP8.03□□□□□ -1.12
PEX28YHR150W UTR4P32626 227 aa8.03□□□□□ -1.12
PEX28YHR150W MCR1P36060 302 aaKnown RBP8.03□□□□□ -1.12
PEX28YHR150W PGM2P37012 569 aaKnown RBP8.03□□□□□ -1.12
PEX28YHR150W VID30P53076 958 aa8.03□□□□□ -1.12
PEX28YHR150W RIM8P53179 542 aa8.03□□□□□ -1.12
PEX28YHR150W ZPR1P53303 486 aaKnown RBP8.03□□□□□ -1.12
PEX28YHR150W UBP3Q01477 912 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12 RIP-Chip
PEX28YHR150W SYH1Q02875 849 aaKnown RBP8.03□□□□□ -1.12
PEX28YHR150W YML082WQ04533 649 aaKnown RBP8.03□□□□□ -1.12
PEX28YHR150W PNP1Q05788 311 aa8.03□□□□□ -1.12
PEX28YHR150W YLR462WO13556 202 aa8.02□□□□□ -1.13
PEX28YHR150W SPT2P06843 333 aaPredicted RBP8.02□□□□□ -1.13
PEX28YHR150W PCK1P10963 549 aa8.02□□□□□ -1.13
PEX28YHR150W ARG1P22768 420 aa8.02□□□□□ -1.13
PEX28YHR150W BLI1P35727 113 aa8.02□□□□□ -1.13
PEX28YHR150W BCH2P36122 765 aa8.02□□□□□ -1.13
PEX28YHR150W YHL049CP38722 271 aa8.02□□□□□ -1.13
PEX28YHR150W YEL075CP39972 122 aa8.02□□□□□ -1.13
PEX28YHR150W YER189WP40104 122 aa8.02□□□□□ -1.13
PEX28YHR150W YFL064CP43540 174 aa8.02□□□□□ -1.13
PEX28YHR150W URB2P47108 1174 aa8.02□□□□□ -1.13
PEX28YHR150W COS5P47187 383 aa8.02□□□□□ -1.13
PEX28YHR150W CTR1P49573 406 aa8.02□□□□□ -1.13
PEX28YHR150W UBP15P50101 1230 aa8.02□□□□□ -1.13
PEX28YHR150W EEB1Q02891 456 aa8.02□□□□□ -1.13
PEX28YHR150W YLR326WQ06170 240 aaKnown RBP8.02□□□□□ -1.13
PEX28YHR150W GUD1Q07729 489 aa8.02□□□□□ -1.13
PEX28YHR150W YBL111CQ3E7Y5 667 aa8.02□□□□□ -1.13
PEX28YHR150W PMR1P13586 950 aa8.01□□□□□ -1.13
PEX28YHR150W CHS2P14180 963 aa8.01□□□□□ -1.13
PEX28YHR150W CDC10P25342 322 aaKnown RBP8.01□□□□□ -1.13
PEX28YHR150W GCD6P32501 712 aaKnown RBP8.01□□□□□ -1.13
PEX28YHR150W SMX2P40204 77 aaKnown RBP8.01□□□□□ -1.13
PEX28YHR150W FIS1P40515 155 aa8.01□□□□□ -1.13
PEX28YHR150W SAP185P40856 1058 aa8.01□□□□□ -1.13
PEX28YHR150W CPR6P53691 371 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms