RNA–Protein interactions for RNA: YHR135C

YCK1, Transcript of Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform, yeastyeast

Gene YCK1, Length 1,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK1YHR135C ULP2P40537 1034 aaPredicted RBP6.76□□□□□ -1.33
YCK1YHR135C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
YCK1YHR135C CTR1P49573 406 aa6.76□□□□□ -1.33
YCK1YHR135C GUP1P53154 560 aa6.76□□□□□ -1.33
YCK1YHR135C SOL4P53315 255 aa6.76□□□□□ -1.33
YCK1YHR135C ORC4P54791 529 aa6.76□□□□□ -1.33
YCK1YHR135C TMA64Q04600 565 aaKnown RBP6.76□□□□□ -1.33
YCK1YHR135C RKM4Q12504 494 aa6.76□□□□□ -1.33
YCK1YHR135C FBP1P09201 348 aa6.75□□□□□ -1.33
YCK1YHR135C RAD18P10862 487 aa6.75□□□□□ -1.33
YCK1YHR135C GAL2P13181 574 aa6.75□□□□□ -1.33
YCK1YHR135C OM45P16547 393 aa6.75□□□□□ -1.33
YCK1YHR135C CKA2P19454 339 aa6.75□□□□□ -1.33
YCK1YHR135C UGA4P32837 571 aa6.75□□□□□ -1.33
YCK1YHR135C YIR007WP40566 764 aa6.75□□□□□ -1.33
YCK1YHR135C DIP5P53388 608 aa6.75□□□□□ -1.33
YCK1YHR135C OYE2Q03558 400 aaKnown RBP6.75□□□□□ -1.33
YCK1YHR135C HDA3Q06623 655 aa6.75□□□□□ -1.33
YCK1YHR135C YDL057WQ07379 328 aa6.75□□□□□ -1.33
YCK1YHR135C CWC2Q12046 339 aaPredicted RBP6.75□□□□□ -1.33
YCK1YHR135C ARP6Q12509 438 aa6.75□□□□□ -1.33
YCK1YHR135C SPO11P23179 398 aa6.74□□□□□ -1.33
YCK1YHR135C ISW1P38144 1129 aa6.74□□□□□ -1.33
YCK1YHR135C SIP3P38717 1229 aa6.74□□□□□ -1.33
YCK1YHR135C PNT1P38969 423 aa6.74□□□□□ -1.33
YCK1YHR135C YFL034WP43564 1073 aa6.74□□□□□ -1.33
YCK1YHR135C ROG3P43602 733 aa6.74□□□□□ -1.33
YCK1YHR135C TOS3P43637 560 aa6.74□□□□□ -1.33
YCK1YHR135C HFM1P51979 1187 aa6.74□□□□□ -1.33
YCK1YHR135C YGL039WP53183 348 aaKnown RBP6.74□□□□□ -1.33
YCK1YHR135C DMA2P53924 522 aa6.74□□□□□ -1.33
YCK1YHR135C HOS3Q02959 697 aaKnown RBP6.74□□□□□ -1.33
YCK1YHR135C MRX10Q05648 414 aa6.74□□□□□ -1.33
YCK1YHR135C YCG1Q06680 1035 aa6.74□□□□□ -1.33
YCK1YHR135C WHI4Q07655 649 aaKnown RBP6.74□□□□□ -1.33
YCK1YHR135C ATG9Q12142 997 aa6.74□□□□□ -1.33
YCK1YHR135C PFK1P16861 987 aaKnown RBP6.73□□□□□ -1.33
YCK1YHR135C PET123P17558 318 aa6.73□□□□□ -1.33
YCK1YHR135C FYV8P46949 817 aaKnown RBP6.73□□□□□ -1.33
YCK1YHR135C SPO75Q07798 868 aa6.73□□□□□ -1.33
YCK1YHR135C RRP6Q12149 733 aaKnown RBP6.73□□□□□ -1.33
YCK1YHR135C GIN4Q12263 1142 aa6.73□□□□□ -1.33
YCK1YHR135C YOL098CQ12496 1037 aa6.73□□□□□ -1.33
YCK1YHR135C ENO1P00924 437 aaKnown RBP6.72□□□□□ -1.33
YCK1YHR135C SSA1P10591 642 aaKnown RBP6.72□□□□□ -1.33
YCK1YHR135C SPC110P32380 944 aa6.72□□□□□ -1.33
YCK1YHR135C TGL1P34163 548 aa6.72□□□□□ -1.33
YCK1YHR135C SHP1P34223 423 aa6.72□□□□□ -1.33
YCK1YHR135C UBP11P36026 717 aa6.72□□□□□ -1.33
YCK1YHR135C SEC9P40357 651 aa6.72□□□□□ -1.33
YCK1YHR135C HUL4P40985 892 aa6.72□□□□□ -1.33
YCK1YHR135C UME1Q03010 460 aa6.72□□□□□ -1.33
YCK1YHR135C UBX5Q06682 500 aa6.72□□□□□ -1.33
YCK1YHR135C HMI1Q12039 706 aa6.72□□□□□ -1.33
YCK1YHR135C SPO12P17123 173 aa6.72□□□□□ -1.33
YCK1YHR135C UBP5P39944 805 aa6.72□□□□□ -1.33
YCK1YHR135C VFA1P40080 203 aa6.72□□□□□ -1.33
YCK1YHR135C NBP1P52919 319 aaPredicted RBP6.72□□□□□ -1.33
YCK1YHR135C LIF1P53150 421 aa6.72□□□□□ -1.33
YCK1YHR135C YGR035CP53222 116 aa6.72□□□□□ -1.33
YCK1YHR135C TY1A-MR1Q04215 440 aa6.72□□□□□ -1.33
YCK1YHR135C FUS2Q05670 677 aa6.72□□□□□ -1.33
YCK1YHR135C YLR287CQ05881 355 aa6.72□□□□□ -1.33
YCK1YHR135C VPS38Q05919 439 aa6.72□□□□□ -1.33
YCK1YHR135C DUS3Q06053 668 aaKnown RBP6.72□□□□□ -1.33
YCK1YHR135C COG4Q06096 861 aa6.72□□□□□ -1.33
YCK1YHR135C SUB2Q07478 446 aaKnown RBP6.72□□□□□ -1.33
YCK1YHR135C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34 RIP-Chip
YCK1YHR135C RDS2P19541 446 aaKnown RBP6.71□□□□□ -1.34
YCK1YHR135C DAL7P21826 554 aa6.71□□□□□ -1.34
YCK1YHR135C TRK2P28584 889 aa6.71□□□□□ -1.34
YCK1YHR135C SLX8P40072 274 aa6.71□□□□□ -1.34
YCK1YHR135C PEA2P40091 420 aa6.71□□□□□ -1.34
YCK1YHR135C NUP82P40368 713 aa6.71□□□□□ -1.34
YCK1YHR135C SHQ1P40486 507 aaPredicted RBP6.71□□□□□ -1.34
YCK1YHR135C GPD2P41911 440 aaKnown RBP6.71□□□□□ -1.34
YCK1YHR135C CAF130P53280 1122 aaPredicted RBP6.71□□□□□ -1.34
YCK1YHR135C ERG5P54781 538 aa6.71□□□□□ -1.34
YCK1YHR135C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34not detected
YCK1YHR135C TCO89Q08921 799 aa6.71□□□□□ -1.34
YCK1YHR135C ECM29P38737 1868 aa6.71□□□□□ -1.34
YCK1YHR135C CDC19P00549 500 aaKnown RBP6.7□□□□□ -1.34
YCK1YHR135C CLN3P13365 580 aa6.7□□□□□ -1.34
YCK1YHR135C PGM1P33401 570 aaKnown RBP6.7□□□□□ -1.34
YCK1YHR135C STO1P34160 861 aaKnown RBP6.7□□□□□ -1.34
YCK1YHR135C YEL1P34225 687 aa6.7□□□□□ -1.34
YCK1YHR135C OCT1P35999 772 aa6.7□□□□□ -1.34
YCK1YHR135C CCC2P38995 1004 aa6.7□□□□□ -1.34
YCK1YHR135C ALA1P40825 983 aaKnown RBP6.7□□□□□ -1.34
YCK1YHR135C IES1P43579 692 aa6.7□□□□□ -1.34
YCK1YHR135C SUM1P46676 1062 aa6.7□□□□□ -1.34
YCK1YHR135C APT1P49435 187 aaKnown RBP6.7□□□□□ -1.34
YCK1YHR135C ALD6P54115 500 aaKnown RBP6.7□□□□□ -1.34
YCK1YHR135C CWC15Q03772 175 aaKnown RBP6.7□□□□□ -1.34
YCK1YHR135C SPH1Q06160 661 aa6.7□□□□□ -1.34
YCK1YHR135C SFI1Q12369 946 aa6.7□□□□□ -1.34
YCK1YHR135C SRD1P09007 221 aa6.69□□□□□ -1.34
YCK1YHR135C MTF2P10849 440 aa6.69□□□□□ -1.34
YCK1YHR135C UBC1P21734 215 aaKnown RBP6.69□□□□□ -1.34
YCK1YHR135C PRP22P24384 1145 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 278.1 ms