RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD1YHR003C TUB2P02557 457 aaKnown RBP3.79□□□□□ -1.8
TCD1YHR003C NOT3P06102 836 aaKnown RBP3.79□□□□□ -1.8
TCD1YHR003C ARE1P25628 610 aa3.79□□□□□ -1.8
TCD1YHR003C REC104P33323 182 aa3.79□□□□□ -1.8
TCD1YHR003C TRM2P33753 639 aa3.79□□□□□ -1.8
TCD1YHR003C BRN1P38170 754 aa3.79□□□□□ -1.8
TCD1YHR003C NCS6P53088 359 aa3.79□□□□□ -1.8
TCD1YHR003C VPS30Q02948 557 aa3.79□□□□□ -1.8
TCD1YHR003C BUL2Q03758 920 aaKnown RBP3.79□□□□□ -1.8
TCD1YHR003C NTO1Q12311 748 aa3.79□□□□□ -1.8
TCD1YHR003C SGS1P35187 1447 aa3.78□□□□□ -1.8
TCD1YHR003C RKR1Q04781 1562 aa3.78□□□□□ -1.8
TCD1YHR003C PMA1P05030 918 aaKnown RBP3.78□□□□□ -1.8
TCD1YHR003C HSP60P19882 572 aaKnown RBP3.78□□□□□ -1.8
TCD1YHR003C STE13P33894 931 aa3.78□□□□□ -1.8
TCD1YHR003C EXG2P52911 562 aa3.78□□□□□ -1.8
TCD1YHR003C YRB30P53107 440 aaPredicted RBP3.78□□□□□ -1.8
TCD1YHR003C UBX5Q06682 500 aa3.78□□□□□ -1.8
TCD1YHR003C GUP2Q08929 609 aa3.78□□□□□ -1.8
TCD1YHR003C NPC2Q12408 173 aa3.78□□□□□ -1.8
TCD1YHR003C KCS1Q12494 1050 aa3.78□□□□□ -1.8
TCD1YHR003C XRN1P22147 1528 aaKnown RBP3.78□□□□□ -1.8
TCD1YHR003C PMI40P29952 429 aaKnown RBP3.77□□□□□ -1.81
TCD1YHR003C YBR284WP38150 797 aa3.77□□□□□ -1.81
TCD1YHR003C TOK1P40310 691 aa3.77□□□□□ -1.81
TCD1YHR003C TIM54P47045 478 aa3.77□□□□□ -1.81
TCD1YHR003C WHI4Q07655 649 aaKnown RBP3.77□□□□□ -1.81
TCD1YHR003C UPC2Q12151 913 aa3.77□□□□□ -1.81
TCD1YHR003C YPR071WQ12346 211 aa3.77□□□□□ -1.81
TCD1YHR003C HBN1Q96VH4 193 aa3.77□□□□□ -1.81
TCD1YHR003C CIT1P00890 479 aa3.76□□□□□ -1.81
TCD1YHR003C RFA1P22336 621 aaKnown RBP3.76□□□□□ -1.81
TCD1YHR003C SED4P25365 1065 aa3.76□□□□□ -1.81
TCD1YHR003C SPC42P36094 363 aa3.76□□□□□ -1.81
TCD1YHR003C PET10P36139 283 aa3.76□□□□□ -1.81
TCD1YHR003C HUL4P40985 892 aa3.76□□□□□ -1.81
TCD1YHR003C NNF1P47149 201 aa3.76□□□□□ -1.81
TCD1YHR003C PHO23P50947 330 aa3.76□□□□□ -1.81
TCD1YHR003C YGR125WP53273 1036 aa3.76□□□□□ -1.81
TCD1YHR003C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
TCD1YHR003C ENB1Q08299 606 aa3.76□□□□□ -1.81
TCD1YHR003C FBP1P09201 348 aa3.75□□□□□ -1.81
TCD1YHR003C MSD1P15179 658 aaKnown RBP3.75□□□□□ -1.81
TCD1YHR003C PFK1P16861 987 aaKnown RBP3.75□□□□□ -1.81
TCD1YHR003C DEF1P35732 738 aaKnown RBP3.75□□□□□ -1.81
TCD1YHR003C ERT1P38140 529 aa3.75□□□□□ -1.81
TCD1YHR003C ATG36P46983 293 aa3.75□□□□□ -1.81
TCD1YHR003C FPR4Q06205 392 aaPredicted RBP3.75□□□□□ -1.81
TCD1YHR003C YDL124WQ07551 312 aaKnown RBP3.75□□□□□ -1.81
TCD1YHR003C FLC1Q08967 793 aa3.75□□□□□ -1.81
TCD1YHR003C PUS9Q12069 462 aa3.75□□□□□ -1.81
TCD1YHR003C MPH2P0CD99 609 aa3.74□□□□□ -1.81
TCD1YHR003C KAR4P25583 335 aa3.74□□□□□ -1.81
TCD1YHR003C STE14P32584 239 aa3.74□□□□□ -1.81
TCD1YHR003C TYE7P33122 291 aaPredicted RBP3.74□□□□□ -1.81
TCD1YHR003C YHR020WP38708 688 aaKnown RBP3.74□□□□□ -1.81
TCD1YHR003C NMD2P38798 1089 aaKnown RBP3.74□□□□□ -1.81
TCD1YHR003C GGA2P38817 585 aaKnown RBP3.74□□□□□ -1.81
TCD1YHR003C YIL108WP40483 696 aaKnown RBP3.74□□□□□ -1.81
TCD1YHR003C MSE1P48525 536 aa3.74□□□□□ -1.81
TCD1YHR003C HUL5P53119 910 aa3.74□□□□□ -1.81
TCD1YHR003C YKR011CQ02209 353 aa3.74□□□□□ -1.81
TCD1YHR003C TAF8Q03750 510 aa3.74□□□□□ -1.81
TCD1YHR003C SSL1Q04673 461 aaPredicted RBP3.74□□□□□ -1.81
TCD1YHR003C PNS1Q12412 539 aa3.74□□□□□ -1.81
TCD1YHR003C DRS2P39524 1355 aa3.74□□□□□ -1.81
TCD1YHR003C CHD1P32657 1468 aa3.73□□□□□ -1.81
TCD1YHR003C SKI3P17883 1432 aaKnown RBP3.73□□□□□ -1.81
TCD1YHR003C TOP3P13099 656 aa3.73□□□□□ -1.81
TCD1YHR003C STI1P15705 589 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
TCD1YHR003C URA1P28272 314 aaPredicted RBP3.73□□□□□ -1.81
TCD1YHR003C SDP1P40479 209 aa3.73□□□□□ -1.81
TCD1YHR003C AIM21P40563 679 aa3.73□□□□□ -1.81
TCD1YHR003C CEP3P40969 608 aa3.73□□□□□ -1.81
TCD1YHR003C UBP6P43593 499 aaKnown RBP3.73□□□□□ -1.81
TCD1YHR003C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
TCD1YHR003C NIT3P49954 291 aa3.73□□□□□ -1.81
TCD1YHR003C BDF2Q07442 638 aa3.73□□□□□ -1.81
TCD1YHR003C AIM39Q08223 395 aa3.73□□□□□ -1.81
TCD1YHR003C UFD4P33202 1483 aa3.73□□□□□ -1.81
TCD1YHR003C RPS9AO13516 197 aaKnown RBP3.72□□□□□ -1.81
TCD1YHR003C CAD1P24813 409 aaKnown RBP3.72□□□□□ -1.81
TCD1YHR003C RPD3P32561 433 aa3.72□□□□□ -1.81
TCD1YHR003C MSS4P38994 779 aa3.72□□□□□ -1.81
TCD1YHR003C RSP5P39940 809 aaKnown RBP3.72□□□□□ -1.81
TCD1YHR003C NUG1P40010 520 aaKnown RBP3.72□□□□□ -1.81
TCD1YHR003C SUN4P53616 420 aa3.72□□□□□ -1.81
TCD1YHR003C NOG2P53742 486 aaKnown RBP3.72□□□□□ -1.81
TCD1YHR003C HDA1P53973 706 aa3.72□□□□□ -1.81
TCD1YHR003C ENV7Q12003 364 aa3.72□□□□□ -1.81
TCD1YHR003C CAN1P04817 590 aa3.71□□□□□ -1.82
TCD1YHR003C TOM70P07213 617 aaKnown RBP3.71□□□□□ -1.82
TCD1YHR003C HRR25P29295 494 aaKnown RBP3.71□□□□□ -1.82
TCD1YHR003C CTF8P38877 133 aa3.71□□□□□ -1.82
TCD1YHR003C DAM1P53267 343 aa3.71□□□□□ -1.82
TCD1YHR003C NSE3Q05541 303 aa3.71□□□□□ -1.82
TCD1YHR003C CDC53Q12018 815 aaKnown RBP3.71□□□□□ -1.82
TCD1YHR003C LAS17Q12446 633 aa3.71□□□□□ -1.82
TCD1YHR003C GAL11P19659 1081 aa3.7□□□□□ -1.82
TCD1YHR003C EMC3P36039 253 aa3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 99.4 ms