RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W SEC9P40357 651 aa8.51□□□□□ -1.05
SHC1YER096W STU2P46675 888 aa8.51□□□□□ -1.05
SHC1YER096W PSP2P50109 593 aaKnown RBP8.51□□□□□ -1.05
SHC1YER096W TPO2P53283 614 aa8.51□□□□□ -1.05
SHC1YER096W PDC6P26263 563 aaKnown RBP8.5□□□□□ -1.05
SHC1YER096W SMY2P32909 740 aaKnown RBP8.5□□□□□ -1.05
SHC1YER096W FIG4P42837 879 aa8.5□□□□□ -1.05
SHC1YER096W ORC5P50874 479 aa8.5□□□□□ -1.05
SHC1YER096W UBP3Q01477 912 aaKnown RBP RIP-Chip data8.5□□□□□ -1.05not detected
SHC1YER096W VTC3Q02725 835 aa8.5□□□□□ -1.05
SHC1YER096W DON1Q05610 365 aa8.5□□□□□ -1.05
SHC1YER096W VPS38Q05919 439 aa8.5□□□□□ -1.05
SHC1YER096W ICL2Q12031 575 aa8.5□□□□□ -1.05
SHC1YER096W SLX4Q12098 748 aa8.5□□□□□ -1.05
SHC1YER096W YOL098CQ12496 1037 aa8.5□□□□□ -1.05
SHC1YER096W MUD1P32605 298 aaKnown RBP8.49□□□□□ -1.05
SHC1YER096W MMM1P41800 426 aa8.49□□□□□ -1.05
SHC1YER096W SKP2P42843 763 aa8.49□□□□□ -1.05
SHC1YER096W ACF4P47129 309 aa8.49□□□□□ -1.05
SHC1YER096W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
SHC1YER096W YDR090CQ03193 310 aa8.49□□□□□ -1.05
SHC1YER096W YLR297WQ05899 129 aa8.49□□□□□ -1.05
SHC1YER096W CSR1Q06705 408 aaKnown RBP8.49□□□□□ -1.05
SHC1YER096W RLP24Q07915 199 aaKnown RBP8.49□□□□□ -1.05
SHC1YER096W NEW1Q08972 1196 aaKnown RBP8.49□□□□□ -1.05
SHC1YER096W SRF1Q12516 437 aa8.49□□□□□ -1.05
SHC1YER096W MTF2P10849 440 aa8.49□□□□□ -1.05
SHC1YER096W RAD57P25301 460 aa8.49□□□□□ -1.05
SHC1YER096W RME1P32338 300 aaKnown RBP8.49□□□□□ -1.05
SHC1YER096W MDR1P53258 950 aa8.49□□□□□ -1.05
SHC1YER096W GIR2Q03768 265 aaPredicted RBP8.49□□□□□ -1.05
SHC1YER096W YDL206WQ12424 762 aa8.49□□□□□ -1.05
SHC1YER096W ATG11Q12527 1178 aa8.49□□□□□ -1.05
SHC1YER096W TOM70P07213 617 aaKnown RBP8.48□□□□□ -1.05
SHC1YER096W SEC23P15303 768 aaKnown RBP8.48□□□□□ -1.05
SHC1YER096W UBC1P21734 215 aaKnown RBP8.48□□□□□ -1.05
SHC1YER096W SPC110P32380 944 aa8.48□□□□□ -1.05
SHC1YER096W TIM23P32897 222 aa8.48□□□□□ -1.05
SHC1YER096W STO1P34160 861 aaKnown RBP8.48□□□□□ -1.05
SHC1YER096W VID24P38263 362 aa8.48□□□□□ -1.05
SHC1YER096W EFM4P40516 257 aa8.48□□□□□ -1.05
SHC1YER096W ASN1P49089 572 aaKnown RBP8.48□□□□□ -1.05
SHC1YER096W MNP1P53163 194 aaPredicted RBP8.48□□□□□ -1.05
SHC1YER096W CUL3P53202 744 aa8.48□□□□□ -1.05
SHC1YER096W DAK1P54838 584 aaKnown RBP8.48□□□□□ -1.05
SHC1YER096W YLR001CQ07895 862 aa8.48□□□□□ -1.05
SHC1YER096W SUT2Q12286 268 aa8.48□□□□□ -1.05
SHC1YER096W ZPS1Q12512 249 aa8.48□□□□□ -1.05
SHC1YER096W COX4P04037 155 aa8.47□□□□□ -1.05
SHC1YER096W PET123P17558 318 aa8.47□□□□□ -1.05
SHC1YER096W IME1P21190 360 aa8.47□□□□□ -1.05
SHC1YER096W TMT1P32643 299 aa8.47□□□□□ -1.05
SHC1YER096W SMC1P32908 1225 aa8.47□□□□□ -1.05
SHC1YER096W NIP100P33420 868 aa8.47□□□□□ -1.05
SHC1YER096W GUA1P38625 525 aaKnown RBP8.47□□□□□ -1.05
SHC1YER096W SET5P38890 526 aaKnown RBP8.47□□□□□ -1.05
SHC1YER096W PSF2P40359 213 aa8.47□□□□□ -1.05
SHC1YER096W SDS3P40505 327 aa8.47□□□□□ -1.05
SHC1YER096W HSH155P49955 971 aaKnown RBP8.47□□□□□ -1.05
SHC1YER096W NCS6P53088 359 aa8.47□□□□□ -1.05
SHC1YER096W ALF1P53904 254 aa8.47□□□□□ -1.05
SHC1YER096W MSC2Q03455 724 aa8.47□□□□□ -1.05
SHC1YER096W TRS130Q03660 1102 aa8.47□□□□□ -1.05
SHC1YER096W UTP14Q04500 899 aaKnown RBP8.47□□□□□ -1.05
SHC1YER096W YPR078CQ06813 372 aa8.47□□□□□ -1.05
SHC1YER096W SIL1Q08199 421 aa8.47□□□□□ -1.05
SHC1YER096W RPL4AP10664 362 aaKnown RBP8.46□□□□□ -1.05
SHC1YER096W VMA1P17255 1071 aaKnown RBP8.46□□□□□ -1.05
SHC1YER096W RAD54P32863 898 aa8.46□□□□□ -1.05
SHC1YER096W KIC1P38692 1080 aa8.46□□□□□ -1.05
SHC1YER096W NPP2P39997 493 aa8.46□□□□□ -1.05
SHC1YER096W RPL4BP49626 362 aaKnown RBP8.46□□□□□ -1.05
SHC1YER096W MCM16Q12262 181 aa8.46□□□□□ -1.05
SHC1YER096W TRP2P00899 507 aaKnown RBP8.45□□□□□ -1.06
SHC1YER096W DPH2P32461 534 aa8.45□□□□□ -1.06
SHC1YER096W PIN4P34217 668 aaKnown RBP RIP-Chip data8.45□□□□□ -1.06not detected
SHC1YER096W YAP5P40574 245 aa8.45□□□□□ -1.06
SHC1YER096W YJR107WP47145 328 aa8.45□□□□□ -1.06
SHC1YER096W APT1P49435 187 aaKnown RBP8.45□□□□□ -1.06
SHC1YER096W BOP3P53958 396 aa8.45□□□□□ -1.06
SHC1YER096W ESC2Q06340 456 aa8.45□□□□□ -1.06
SHC1YER096W PLP2Q12017 286 aa8.45□□□□□ -1.06
SHC1YER096W YOR131CQ12486 218 aa8.45□□□□□ -1.06
SHC1YER096W VPS13Q07878 3144 aa8.45□□□□□ -1.06
SHC1YER096W CDC42P19073 191 aa8.44□□□□□ -1.06
SHC1YER096W VPS35P34110 944 aa8.44□□□□□ -1.06
SHC1YER096W GPT2P36148 743 aa8.44□□□□□ -1.06
SHC1YER096W TRZ1P36159 838 aaPredicted RBP8.44□□□□□ -1.06
SHC1YER096W ULP1Q02724 621 aa8.44□□□□□ -1.06
SHC1YER096W VPS72Q03388 795 aa8.44□□□□□ -1.06
SHC1YER096W PPM1Q04081 328 aa8.44□□□□□ -1.06
SHC1YER096W SOV1Q04748 898 aa8.44□□□□□ -1.06
SHC1YER096W ECM7Q06200 448 aa8.44□□□□□ -1.06
SHC1YER096W SHS1Q07657 551 aa8.44□□□□□ -1.06
SHC1YER096W OSW2Q12202 724 aa8.44□□□□□ -1.06
SHC1YER096W SWI6P09959 803 aa8.44□□□□□ -1.06
SHC1YER096W KIP1P28742 1111 aa8.44□□□□□ -1.06
SHC1YER096W JNM1P36224 373 aa8.44□□□□□ -1.06
SHC1YER096W MCX1P38323 520 aaPredicted RBP8.44□□□□□ -1.06
SHC1YER096W ZAP1P47043 880 aa8.44□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms