RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W RXT2P38255 430 aa3.61□□□□□ -1.83
SIZ1YDR409W LSM5P40089 93 aaKnown RBP3.61□□□□□ -1.83
SIZ1YDR409W GCD10P41814 478 aa3.61□□□□□ -1.83
SIZ1YDR409W ENT3P47160 408 aa3.61□□□□□ -1.83
SIZ1YDR409W ISM1P48526 1002 aa3.61□□□□□ -1.83
SIZ1YDR409W UTP8P53276 713 aaKnown RBP3.61□□□□□ -1.83
SIZ1YDR409W CAF130P53280 1122 aaPredicted RBP3.61□□□□□ -1.83
SIZ1YDR409W RBA50Q04418 439 aa3.61□□□□□ -1.83
SIZ1YDR409W PHM6Q05637 104 aa3.61□□□□□ -1.83
SIZ1YDR409W ENV9Q08651 330 aa3.61□□□□□ -1.83
SIZ1YDR409W TMA16Q08687 178 aa3.61□□□□□ -1.83
SIZ1YDR409W CYB2P00175 591 aa3.61□□□□□ -1.83
SIZ1YDR409W HSP82P02829 709 aaKnown RBP3.61□□□□□ -1.83
SIZ1YDR409W GFA1P14742 717 aaKnown RBP3.61□□□□□ -1.83
SIZ1YDR409W RGP1P16664 663 aa3.61□□□□□ -1.83
SIZ1YDR409W MCM4P30665 933 aaKnown RBP3.61□□□□□ -1.83
SIZ1YDR409W FBP26P32604 452 aa3.61□□□□□ -1.83
SIZ1YDR409W PEP7P32609 515 aa3.61□□□□□ -1.83
SIZ1YDR409W TRZ1P36159 838 aaPredicted RBP3.61□□□□□ -1.83
SIZ1YDR409W VID28P40547 921 aa3.61□□□□□ -1.83
SIZ1YDR409W HUL4P40985 892 aa3.61□□□□□ -1.83
SIZ1YDR409W RET2P43621 546 aa3.61□□□□□ -1.83
SIZ1YDR409W RAD17P48581 401 aa3.61□□□□□ -1.83
SIZ1YDR409W UBA2P52488 636 aa3.61□□□□□ -1.83
SIZ1YDR409W PCL10P53124 433 aa3.61□□□□□ -1.83
SIZ1YDR409W PIB2P53191 635 aa3.61□□□□□ -1.83
SIZ1YDR409W UFD2P54860 961 aa3.61□□□□□ -1.83
SIZ1YDR409W SHE9Q04172 456 aa3.61□□□□□ -1.83
SIZ1YDR409W VMS1Q04311 632 aaKnown RBP3.61□□□□□ -1.83
SIZ1YDR409W SFH1Q06168 426 aa3.61□□□□□ -1.83
SIZ1YDR409W OMS1Q06668 471 aa3.61□□□□□ -1.83
SIZ1YDR409W RIX7Q07844 837 aaKnown RBP3.61□□□□□ -1.83
SIZ1YDR409W RPL22AP05749 121 aaKnown RBP3.6□□□□□ -1.83
SIZ1YDR409W SBP1P10080 294 aaKnown RBP3.6□□□□□ -1.83
SIZ1YDR409W MCM1P11746 286 aa3.6□□□□□ -1.83
SIZ1YDR409W CBP3P21560 335 aa3.6□□□□□ -1.83
SIZ1YDR409W AGP1P25376 633 aa3.6□□□□□ -1.83
SIZ1YDR409W AAD3P25612 363 aa3.6□□□□□ -1.83
SIZ1YDR409W ABD1P32783 436 aaPredicted RBP3.6□□□□□ -1.83
SIZ1YDR409W NUP120P35729 1037 aa3.6□□□□□ -1.83
SIZ1YDR409W DEF1P35732 738 aaKnown RBP3.6□□□□□ -1.83
SIZ1YDR409W REI1P38344 393 aaPredicted RBP3.6□□□□□ -1.83
SIZ1YDR409W YHR218WP38899 603 aa3.6□□□□□ -1.83
SIZ1YDR409W DUN1P39009 513 aa3.6□□□□□ -1.83
SIZ1YDR409W BUD16P39988 312 aa3.6□□□□□ -1.83
SIZ1YDR409W LTP1P40347 161 aa3.6□□□□□ -1.83
SIZ1YDR409W ALA1P40825 983 aaKnown RBP3.6□□□□□ -1.83
SIZ1YDR409W ARP5P53946 755 aa3.6□□□□□ -1.83
SIZ1YDR409W BOP3P53958 396 aa3.6□□□□□ -1.83
SIZ1YDR409W HEH2Q03281 663 aa3.6□□□□□ -1.83
SIZ1YDR409W SEC23P15303 768 aaKnown RBP3.6□□□□□ -1.83
SIZ1YDR409W SER1P33330 395 aaKnown RBP3.6□□□□□ -1.83
SIZ1YDR409W RDH54P38086 958 aa3.6□□□□□ -1.83
SIZ1YDR409W BCD1P38772 366 aa3.6□□□□□ -1.83
SIZ1YDR409W CIC1P38779 376 aaKnown RBP3.6□□□□□ -1.83
SIZ1YDR409W RIO2P40160 425 aaKnown RBP3.6□□□□□ -1.83
SIZ1YDR409W RMD8P43620 662 aa3.6□□□□□ -1.83
SIZ1YDR409W YKE2P52553 114 aa3.6□□□□□ -1.83
SIZ1YDR409W YNL165WP53891 406 aa3.6□□□□□ -1.83
SIZ1YDR409W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
SIZ1YDR409W ATG23Q06671 453 aa3.6□□□□□ -1.83
SIZ1YDR409W YPR097WQ06839 1073 aa3.6□□□□□ -1.83
SIZ1YDR409W BDS1Q08347 646 aa3.6□□□□□ -1.83
SIZ1YDR409W PUS1Q12211 544 aaKnown RBP3.6□□□□□ -1.83
SIZ1YDR409W TRP2P00899 507 aaKnown RBP3.59□□□□□ -1.83
SIZ1YDR409W PDC1P06169 563 aaKnown RBP3.59□□□□□ -1.83
SIZ1YDR409W MRPL33P20084 86 aa3.59□□□□□ -1.83
SIZ1YDR409W GCD6P32501 712 aaKnown RBP3.59□□□□□ -1.83
SIZ1YDR409W PRP40P33203 583 aaKnown RBP3.59□□□□□ -1.83
SIZ1YDR409W LRP1P38801 184 aaKnown RBP3.59□□□□□ -1.83
SIZ1YDR409W CAJ1P39101 391 aa3.59□□□□□ -1.83
SIZ1YDR409W SEC9P40357 651 aa3.59□□□□□ -1.83
SIZ1YDR409W NDC80P40460 691 aa3.59□□□□□ -1.83
SIZ1YDR409W RRT6P53117 311 aaPredicted RBP3.59□□□□□ -1.83
SIZ1YDR409W MET13P53128 600 aa3.59□□□□□ -1.83
SIZ1YDR409W ARE2P53629 642 aaKnown RBP3.59□□□□□ -1.83
SIZ1YDR409W ULP1Q02724 621 aa3.59□□□□□ -1.83
SIZ1YDR409W DAL4Q04895 635 aa3.59□□□□□ -1.83
SIZ1YDR409W VPS38Q05919 439 aa3.59□□□□□ -1.83
SIZ1YDR409W NBA1Q08229 501 aaKnown RBP3.59□□□□□ -1.83
SIZ1YDR409W ALR1Q08269 859 aa3.59□□□□□ -1.83
SIZ1YDR409W YOR223WQ12015 292 aa3.59□□□□□ -1.83
SIZ1YDR409W CMR1Q12510 522 aaKnown RBP3.59□□□□□ -1.83
SIZ1YDR409W FLP1P03870 423 aa3.59□□□□□ -1.83
SIZ1YDR409W RAD3P06839 778 aa3.59□□□□□ -1.83
SIZ1YDR409W SWI5P08153 709 aa3.59□□□□□ -1.83
SIZ1YDR409W LPD1P09624 499 aaKnown RBP3.59□□□□□ -1.83
SIZ1YDR409W TEC1P18412 486 aa3.59□□□□□ -1.83
SIZ1YDR409W DAL7P21826 554 aa3.59□□□□□ -1.83
SIZ1YDR409W VAC17P25591 423 aa3.59□□□□□ -1.83
SIZ1YDR409W RER2P35196 286 aa3.59□□□□□ -1.83
SIZ1YDR409W NUP133P36161 1157 aa3.59□□□□□ -1.83
SIZ1YDR409W QRI7P43122 407 aa3.59□□□□□ -1.83
SIZ1YDR409W YJR079WP47126 109 aa3.59□□□□□ -1.83
SIZ1YDR409W YJR115WP47152 169 aa3.59□□□□□ -1.83
SIZ1YDR409W OCA1P50946 238 aaPredicted RBP3.59□□□□□ -1.83
SIZ1YDR409W ZDS2P54786 942 aa3.59□□□□□ -1.83
SIZ1YDR409W VTI1Q04338 217 aa3.59□□□□□ -1.83
SIZ1YDR409W STE23Q06010 1027 aa3.59□□□□□ -1.83
SIZ1YDR409W YLR345WQ06137 509 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms