RNA–Protein interactions for RNA: YDR357C

CNL1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene CNL1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CNL1YDR357C SWC3P31376 625 aa5.18□□□□□ -1.58
CNL1YDR357C RPN2P32565 945 aaKnown RBP5.18□□□□□ -1.58
CNL1YDR357C NPL6P32832 435 aa5.18□□□□□ -1.58
CNL1YDR357C PRP40P33203 583 aaKnown RBP5.18□□□□□ -1.58
CNL1YDR357C ARC19P33204 171 aaKnown RBP5.18□□□□□ -1.58
CNL1YDR357C SKI2P35207 1287 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
CNL1YDR357C MCM7P38132 845 aa5.18□□□□□ -1.58
CNL1YDR357C NOP16P40007 231 aaKnown RBP5.18□□□□□ -1.58
CNL1YDR357C PSY2P40164 858 aa5.18□□□□□ -1.58
CNL1YDR357C YTA6P40328 754 aa5.18□□□□□ -1.58
CNL1YDR357C RAD26P40352 1085 aa5.18□□□□□ -1.58
CNL1YDR357C SEC26P41810 973 aaKnown RBP5.18□□□□□ -1.58
CNL1YDR357C YFL066CP43538 392 aa5.18□□□□□ -1.58
CNL1YDR357C NIT2P47016 307 aa5.18□□□□□ -1.58
CNL1YDR357C PIL1P53252 339 aaKnown RBP5.18□□□□□ -1.58
CNL1YDR357C CUZ1P53899 274 aa5.18□□□□□ -1.58
CNL1YDR357C EEB1Q02891 456 aa5.18□□□□□ -1.58
CNL1YDR357C EAR1Q03212 550 aa5.18□□□□□ -1.58
CNL1YDR357C TAF11Q04226 346 aa5.18□□□□□ -1.58
CNL1YDR357C YKU80Q04437 629 aa5.18□□□□□ -1.58
CNL1YDR357C EIS1Q05050 843 aaKnown RBP5.18□□□□□ -1.58
CNL1YDR357C ARV1Q06541 321 aa5.18□□□□□ -1.58
CNL1YDR357C INP54Q08227 384 aaKnown RBP5.18□□□□□ -1.58
CNL1YDR357C THI72Q08579 599 aa5.18□□□□□ -1.58
CNL1YDR357C YTM1Q12024 460 aaPredicted RBP5.18□□□□□ -1.58
CNL1YDR357C WTM2Q12206 467 aa5.18□□□□□ -1.58
CNL1YDR357C TY1A-DR3Q12441 440 aa5.18□□□□□ -1.58
CNL1YDR357C YMR084WA2P2R3 262 aa5.17□□□□□ -1.58
CNL1YDR357C PDX1P16451 410 aa5.17□□□□□ -1.58
CNL1YDR357C PET123P17558 318 aa5.17□□□□□ -1.58
CNL1YDR357C RPB4P20433 221 aaPredicted RBP5.17□□□□□ -1.58
CNL1YDR357C SMY1P32364 656 aaKnown RBP5.17□□□□□ -1.58
CNL1YDR357C RIB7P33312 244 aa5.17□□□□□ -1.58
CNL1YDR357C SPC29P33419 253 aa5.17□□□□□ -1.58
CNL1YDR357C SEG2P34250 1132 aa5.17□□□□□ -1.58
CNL1YDR357C YHR131CP38835 850 aa5.17□□□□□ -1.58
CNL1YDR357C SPC72P39723 622 aa5.17□□□□□ -1.58
CNL1YDR357C UTP7P40055 554 aaKnown RBP5.17□□□□□ -1.58
CNL1YDR357C AXL1P40851 1208 aa5.17□□□□□ -1.58
CNL1YDR357C KRE33P53914 1056 aaKnown RBP5.17□□□□□ -1.58
CNL1YDR357C SFB2P53953 876 aa5.17□□□□□ -1.58
CNL1YDR357C YPL109CQ02981 657 aa5.17□□□□□ -1.58
CNL1YDR357C ATG38Q05789 226 aaKnown RBP5.17□□□□□ -1.58
CNL1YDR357C BLS1Q06071 122 aa5.17□□□□□ -1.58
CNL1YDR357C DBP9Q06218 594 aaKnown RBP5.17□□□□□ -1.58
CNL1YDR357C APL4Q12028 832 aa5.17□□□□□ -1.58
CNL1YDR357C REX3Q12090 404 aa5.17□□□□□ -1.58
CNL1YDR357C RRP36Q12481 300 aaPredicted RBP5.17□□□□□ -1.58
CNL1YDR357C MSS18P08593 268 aa5.16□□□□□ -1.58
CNL1YDR357C RPC53P25441 422 aa5.16□□□□□ -1.58
CNL1YDR357C POL4P25615 582 aa5.16□□□□□ -1.58
CNL1YDR357C RPL5P26321 297 aaKnown RBP5.16□□□□□ -1.58
CNL1YDR357C MKK2P32491 506 aa5.16□□□□□ -1.58
CNL1YDR357C PRP19P32523 503 aaKnown RBP5.16□□□□□ -1.58
CNL1YDR357C SLA1P32790 1244 aa5.16□□□□□ -1.58
CNL1YDR357C BYE1P36106 594 aa5.16□□□□□ -1.58
CNL1YDR357C FTH1P38310 465 aa5.16□□□□□ -1.58
CNL1YDR357C ETP1P38748 585 aaKnown RBP5.16□□□□□ -1.58
CNL1YDR357C KAP123P40069 1113 aaKnown RBP5.16□□□□□ -1.58
CNL1YDR357C EMP65P40085 556 aa5.16□□□□□ -1.58
CNL1YDR357C ERR3P42222 437 aa5.16□□□□□ -1.58
CNL1YDR357C LAM5P43560 674 aa5.16□□□□□ -1.58
CNL1YDR357C IRC6P43615 237 aa5.16□□□□□ -1.58
CNL1YDR357C MNP1P53163 194 aaPredicted RBP5.16□□□□□ -1.58
CNL1YDR357C SPO1P53541 631 aa5.16□□□□□ -1.58
CNL1YDR357C ALF1P53904 254 aa5.16□□□□□ -1.58
CNL1YDR357C RAT1Q02792 1006 aaKnown RBP5.16□□□□□ -1.58
CNL1YDR357C ADI1Q03677 179 aa5.16□□□□□ -1.58
CNL1YDR357C PRP42Q03776 544 aaKnown RBP5.16□□□□□ -1.58
CNL1YDR357C YCG1Q06680 1035 aa5.16□□□□□ -1.58
CNL1YDR357C BRE4Q07660 1125 aa5.16□□□□□ -1.58
CNL1YDR357C MLH2Q07980 695 aa5.16□□□□□ -1.58
CNL1YDR357C SFI1Q12369 946 aa5.16□□□□□ -1.58
CNL1YDR357C RKM4Q12504 494 aa5.16□□□□□ -1.58
CNL1YDR357C RMP1Q12530 201 aa5.16□□□□□ -1.58
CNL1YDR357C MSH3P25336 1018 aa5.15□□□□□ -1.59
CNL1YDR357C VBA3P25594 458 aa5.15□□□□□ -1.59
CNL1YDR357C MCM5P29496 775 aaKnown RBP5.15□□□□□ -1.59
CNL1YDR357C PAH1P32567 862 aa5.15□□□□□ -1.59
CNL1YDR357C ABD1P32783 436 aaPredicted RBP5.15□□□□□ -1.59
CNL1YDR357C YEL1P34225 687 aa5.15□□□□□ -1.59
CNL1YDR357C HSM3P38348 480 aa5.15□□□□□ -1.59
CNL1YDR357C FUN12P39730 1002 aaKnown RBP5.15□□□□□ -1.59
CNL1YDR357C SIT1P39980 628 aa5.15□□□□□ -1.59
CNL1YDR357C TOK1P40310 691 aa5.15□□□□□ -1.59
CNL1YDR357C GCD10P41814 478 aa5.15□□□□□ -1.59
CNL1YDR357C QRI7P43122 407 aa5.15□□□□□ -1.59
CNL1YDR357C VPS53P47061 822 aa5.15□□□□□ -1.59
CNL1YDR357C ZIP2P53061 704 aa5.15□□□□□ -1.59
CNL1YDR357C ARA2Q04212 335 aa5.15□□□□□ -1.59
CNL1YDR357C MRL1Q06815 381 aa5.15□□□□□ -1.59
CNL1YDR357C HOM2P13663 365 aaKnown RBP5.14□□□□□ -1.59
CNL1YDR357C PMS1P14242 873 aa5.14□□□□□ -1.59
CNL1YDR357C AAC3P18238 307 aa5.14□□□□□ -1.59
CNL1YDR357C MRPL25P23369 157 aa5.14□□□□□ -1.59
CNL1YDR357C MDL1P33310 695 aa5.14□□□□□ -1.59
CNL1YDR357C MUD2P36084 527 aaKnown RBP5.14□□□□□ -1.59
CNL1YDR357C BIT2P38346 545 aa5.14□□□□□ -1.59
CNL1YDR357C CKB2P38930 258 aa5.14□□□□□ -1.59
CNL1YDR357C SSN3P39073 555 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms