RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W COQ9Q05779 260 aa10.31□□□□□ -0.76
SED1YDR077W YLR297WQ05899 129 aa10.31□□□□□ -0.76
SED1YDR077W YLR225CQ05948 407 aaKnown RBP10.31□□□□□ -0.76
SED1YDR077W ECM29P38737 1868 aa10.3□□□□□ -0.76
SED1YDR077W DED1P06634 604 aaKnown RBP10.3□□□□□ -0.76
SED1YDR077W PET111P08468 800 aa10.3□□□□□ -0.76
SED1YDR077W VMA1P17255 1071 aaKnown RBP10.3□□□□□ -0.76
SED1YDR077W UBC1P21734 215 aaKnown RBP10.3□□□□□ -0.76
SED1YDR077W YUR1P26725 428 aa10.3□□□□□ -0.76
SED1YDR077W IRE1P32361 1115 aa10.3□□□□□ -0.76
SED1YDR077W MUD1P32605 298 aaKnown RBP10.3□□□□□ -0.76
SED1YDR077W SMC1P32908 1225 aa10.3□□□□□ -0.76
SED1YDR077W PSP2P50109 593 aaKnown RBP10.3□□□□□ -0.76
SED1YDR077W RTT102P53330 157 aa10.3□□□□□ -0.76
SED1YDR077W OSW2Q12202 724 aa10.3□□□□□ -0.76
SED1YDR077W SFI1Q12369 946 aa10.3□□□□□ -0.76
SED1YDR077W TIF6Q12522 245 aaKnown RBP10.3□□□□□ -0.76
SED1YDR077W YDR461C-AQ2V2P7 80 aa10.3□□□□□ -0.76
SED1YDR077W TOM70P07213 617 aaKnown RBP10.29□□□□□ -0.76
SED1YDR077W PRE10P21242 288 aaKnown RBP RIP-Chip data10.29□□□□□ -0.76not detected
SED1YDR077W RAD57P25301 460 aa10.29□□□□□ -0.76
SED1YDR077W NAM7P30771 971 aaKnown RBP10.29□□□□□ -0.76
SED1YDR077W YKL023WP36103 277 aaKnown RBP10.29□□□□□ -0.76
SED1YDR077W JNM1P36224 373 aa10.29□□□□□ -0.76
SED1YDR077W CCC2P38995 1004 aa10.29□□□□□ -0.76
SED1YDR077W NDC80P40460 691 aa10.29□□□□□ -0.76
SED1YDR077W CEP3P40969 608 aa10.29□□□□□ -0.76
SED1YDR077W VTC3Q02725 835 aa10.29□□□□□ -0.76
SED1YDR077W CSR1Q06705 408 aaKnown RBP10.29□□□□□ -0.76
SED1YDR077W TSR1Q07381 788 aaKnown RBP10.29□□□□□ -0.76
SED1YDR077W IES4Q08561 116 aa10.29□□□□□ -0.76
SED1YDR077W CDC53Q12018 815 aaKnown RBP10.29□□□□□ -0.76
SED1YDR077W NOP58Q12499 511 aaKnown RBP10.29□□□□□ -0.76
SED1YDR077W TUP1P16649 713 aa10.28□□□□□ -0.76
SED1YDR077W EFT1P32324 842 aaKnown RBP10.28□□□□□ -0.76
SED1YDR077W SRB4P32569 687 aa10.28□□□□□ -0.76
SED1YDR077W NPP2P39997 493 aa10.28□□□□□ -0.76
SED1YDR077W EFM4P40516 257 aa10.28□□□□□ -0.76
SED1YDR077W VAC14Q06708 880 aa10.28□□□□□ -0.76
SED1YDR077W MCM16Q12262 181 aa10.28□□□□□ -0.76
SED1YDR077W POX1P13711 748 aa10.27□□□□□ -0.77
SED1YDR077W RME1P32338 300 aaKnown RBP10.27□□□□□ -0.77
SED1YDR077W GUA1P38625 525 aaKnown RBP10.27□□□□□ -0.77
SED1YDR077W TAD1P53065 400 aa10.27□□□□□ -0.77
SED1YDR077W SHE10P53075 577 aa10.27□□□□□ -0.77
SED1YDR077W CUL3P53202 744 aa10.27□□□□□ -0.77
SED1YDR077W YNL146WP53906 100 aa10.27□□□□□ -0.77
SED1YDR077W ESBP6P53918 673 aa10.27□□□□□ -0.77
SED1YDR077W SML1Q04964 104 aa10.27□□□□□ -0.77
SED1YDR077W HIF1Q12373 385 aa10.27□□□□□ -0.77
SED1YDR077W YEL043WP32618 956 aa10.26□□□□□ -0.77
SED1YDR077W RAD54P32863 898 aa10.26□□□□□ -0.77
SED1YDR077W GPT2P36148 743 aa10.26□□□□□ -0.77
SED1YDR077W HXT8P40886 569 aa10.26□□□□□ -0.77
SED1YDR077W MMM1P41800 426 aa10.26□□□□□ -0.77
SED1YDR077W HFI1Q12060 488 aa10.26□□□□□ -0.77
SED1YDR077W DAS2Q12084 232 aa10.26□□□□□ -0.77
SED1YDR077W MAS2P11914 482 aa10.25□□□□□ -0.77
SED1YDR077W CKI1P20485 582 aa10.25□□□□□ -0.77
SED1YDR077W KIN82P25341 720 aa10.25□□□□□ -0.77
SED1YDR077W DPB3P27344 201 aa10.25□□□□□ -0.77
SED1YDR077W KIP1P28742 1111 aa10.25□□□□□ -0.77
SED1YDR077W DPH2P32461 534 aa10.25□□□□□ -0.77
SED1YDR077W HXT1P32465 570 aa10.25□□□□□ -0.77
SED1YDR077W SMY2P32909 740 aaKnown RBP10.25□□□□□ -0.77
SED1YDR077W PIN4P34217 668 aaKnown RBP RIP-Chip data10.25□□□□□ -0.77not detected
SED1YDR077W FLR1P38124 548 aa10.25□□□□□ -0.77
SED1YDR077W HSH155P49955 971 aaKnown RBP10.25□□□□□ -0.77
SED1YDR077W YML082WQ04533 649 aaKnown RBP10.25□□□□□ -0.77
SED1YDR077W SOV1Q04748 898 aa10.25□□□□□ -0.77
SED1YDR077W ICL2Q12031 575 aa10.25□□□□□ -0.77
SED1YDR077W TOM1Q03280 3268 aa10.24□□□□□ -0.77
SED1YDR077W STE11P23561 717 aa10.24□□□□□ -0.77
SED1YDR077W REI1P38344 393 aaPredicted RBP10.24□□□□□ -0.77
SED1YDR077W TCD1P38756 429 aa10.24□□□□□ -0.77
SED1YDR077W YMR124WP39523 943 aaKnown RBP10.24□□□□□ -0.77
SED1YDR077W BUD16P39988 312 aa10.24□□□□□ -0.77
SED1YDR077W SCD6P45978 349 aaKnown RBP RIP-Chip data10.24□□□□□ -0.77not detected
SED1YDR077W ACF4P47129 309 aa10.24□□□□□ -0.77
SED1YDR077W SGM1P47166 707 aa10.24□□□□□ -0.77
SED1YDR077W ASN1P49089 572 aaKnown RBP10.24□□□□□ -0.77
SED1YDR077W SCS3P53012 380 aa10.24□□□□□ -0.77
SED1YDR077W BOP3P53958 396 aa10.24□□□□□ -0.77
SED1YDR077W YML020WQ03722 664 aa10.24□□□□□ -0.77
SED1YDR077W UTP14Q04500 899 aaKnown RBP10.24□□□□□ -0.77
SED1YDR077W YLR001CQ07895 862 aa10.24□□□□□ -0.77
SED1YDR077W SLX4Q12098 748 aa10.24□□□□□ -0.77
SED1YDR077W YDL206WQ12424 762 aa10.24□□□□□ -0.77
SED1YDR077W NOP14Q99207 810 aaKnown RBP10.24□□□□□ -0.77
SED1YDR077W SNA3P14359 133 aa10.23□□□□□ -0.77
SED1YDR077W ORC5P50874 479 aa10.23□□□□□ -0.77
SED1YDR077W YGR021WP53212 290 aa10.23□□□□□ -0.77
SED1YDR077W TPO2P53283 614 aa10.23□□□□□ -0.77
SED1YDR077W MAL13P53338 473 aa10.23□□□□□ -0.77
SED1YDR077W UBP3Q01477 912 aaKnown RBP RIP-Chip data10.23□□□□□ -0.77not detected
SED1YDR077W YDR090CQ03193 310 aa10.23□□□□□ -0.77
SED1YDR077W TRP2P00899 507 aaKnown RBP10.22□□□□□ -0.77
SED1YDR077W SNF1P06782 633 aaKnown RBP10.22□□□□□ -0.77
SED1YDR077W SWI3P32591 825 aa10.22□□□□□ -0.77
SED1YDR077W VID24P38263 362 aa10.22□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms