RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C INP52P50942 1183 aa5.91□□□□□ -1.46
SCM3YDL139C FAR11P53917 953 aa5.91□□□□□ -1.46
SCM3YDL139C GDE1Q02979 1223 aa5.91□□□□□ -1.46
SCM3YDL139C SSF2Q12153 453 aaPredicted RBP5.91□□□□□ -1.46
SCM3YDL139C RRI2Q12348 645 aa5.91□□□□□ -1.46
SCM3YDL139C ICL1P28240 557 aaPredicted RBP5.9□□□□□ -1.46
SCM3YDL139C KRI1P42846 591 aaKnown RBP5.9□□□□□ -1.46
SCM3YDL139C HDA2Q06629 674 aa5.9□□□□□ -1.46
SCM3YDL139C RTT10Q08924 1013 aa5.9□□□□□ -1.46
SCM3YDL139C RNR2P09938 399 aaKnown RBP5.89□□□□□ -1.47
SCM3YDL139C DID4P36108 232 aa5.89□□□□□ -1.47
SCM3YDL139C SHU2P38957 223 aa5.89□□□□□ -1.47
SCM3YDL139C CLC1P17891 233 aa5.88□□□□□ -1.47
SCM3YDL139C RDS1P25611 832 aa5.88□□□□□ -1.47
SCM3YDL139C RPS7AP26786 190 aaKnown RBP5.88□□□□□ -1.47
SCM3YDL139C MCM4P30665 933 aaKnown RBP5.88□□□□□ -1.47
SCM3YDL139C YKL077WP36081 392 aa5.88□□□□□ -1.47
SCM3YDL139C RDH54P38086 958 aa5.88□□□□□ -1.47
SCM3YDL139C PFF1P38244 976 aa5.88□□□□□ -1.47
SCM3YDL139C YGR053CP53234 283 aa5.88□□□□□ -1.47
SCM3YDL139C EEB1Q02891 456 aa5.88□□□□□ -1.47
SCM3YDL139C ERO1Q03103 563 aa5.88□□□□□ -1.47
SCM3YDL139C YLR407WQ06070 228 aa5.88□□□□□ -1.47
SCM3YDL139C GIC2Q06648 383 aa5.88□□□□□ -1.47
SCM3YDL139C YIG1Q08956 461 aa5.88□□□□□ -1.47
SCM3YDL139C WRS1Q12109 432 aaKnown RBP5.88□□□□□ -1.47
SCM3YDL139C LSP1Q12230 341 aaKnown RBP5.88□□□□□ -1.47
SCM3YDL139C CDC6P09119 513 aa5.87□□□□□ -1.47
SCM3YDL139C PRI2P20457 528 aa5.87□□□□□ -1.47
SCM3YDL139C PEP3P27801 918 aa5.87□□□□□ -1.47
SCM3YDL139C LIP5P32875 414 aa5.87□□□□□ -1.47
SCM3YDL139C VPS24P36095 224 aaKnown RBP5.87□□□□□ -1.47
SCM3YDL139C GPT2P36148 743 aa5.87□□□□□ -1.47
SCM3YDL139C NEM1P38757 446 aa5.87□□□□□ -1.47
SCM3YDL139C BDH2P39713 417 aa5.87□□□□□ -1.47
SCM3YDL139C YFH7P43591 353 aa5.87□□□□□ -1.47
SCM3YDL139C HXT15P54854 567 aa5.87□□□□□ -1.47
SCM3YDL139C PEX19Q07418 342 aa5.87□□□□□ -1.47
SCM3YDL139C YOR223WQ12015 292 aa5.87□□□□□ -1.47
SCM3YDL139C TAH18Q12181 623 aa5.87□□□□□ -1.47
SCM3YDL139C CYC7P00045 113 aa5.86□□□□□ -1.47
SCM3YDL139C OPI1P21957 404 aa5.86□□□□□ -1.47
SCM3YDL139C SRP40P32583 406 aaPredicted RBP5.86□□□□□ -1.47
SCM3YDL139C PRX1P34227 261 aaKnown RBP5.86□□□□□ -1.47
SCM3YDL139C RER2P35196 286 aa5.86□□□□□ -1.47
SCM3YDL139C NDT80P38830 627 aa5.86□□□□□ -1.47
SCM3YDL139C SLS1P42900 643 aa5.86□□□□□ -1.47
SCM3YDL139C IRC8P47046 822 aa5.86□□□□□ -1.47
SCM3YDL139C ROD1Q02805 837 aa5.86□□□□□ -1.47
SCM3YDL139C DOT1Q04089 582 aaKnown RBP5.86□□□□□ -1.47
SCM3YDL139C TFC6Q06339 672 aa5.86□□□□□ -1.47
SCM3YDL139C SUE1Q06524 206 aa5.86□□□□□ -1.47
SCM3YDL139C IRC3Q06683 689 aa5.86□□□□□ -1.47
SCM3YDL139C ALG6Q12001 544 aaKnown RBP5.86□□□□□ -1.47
SCM3YDL139C YOL098CQ12496 1037 aa5.86□□□□□ -1.47
SCM3YDL139C TOP1P04786 769 aa5.85□□□□□ -1.47
SCM3YDL139C RPL19AP0CX82 189 aaKnown RBP5.85□□□□□ -1.47
SCM3YDL139C RPL19BP0CX83 189 aaPredicted RBP5.85□□□□□ -1.47
SCM3YDL139C TAF13P11747 167 aa5.85□□□□□ -1.47
SCM3YDL139C HCA4P20448 770 aaKnown RBP5.85□□□□□ -1.47
SCM3YDL139C ACE2P21192 770 aa5.85□□□□□ -1.47
SCM3YDL139C VMA4P22203 233 aaKnown RBP5.85□□□□□ -1.47
SCM3YDL139C MYO3P36006 1272 aa5.85□□□□□ -1.47
SCM3YDL139C SPO74P45819 413 aa5.85□□□□□ -1.47
SCM3YDL139C SIW14P53965 281 aa5.85□□□□□ -1.47
SCM3YDL139C RPS15Q01855 142 aaKnown RBP5.85□□□□□ -1.47
SCM3YDL139C OPI10Q08202 246 aa5.85□□□□□ -1.47
SCM3YDL139C DCS2Q12123 353 aa5.85□□□□□ -1.47
SCM3YDL139C YPL150WQ12152 901 aa5.85□□□□□ -1.47
SCM3YDL139C YOR111WQ99210 232 aa5.85□□□□□ -1.47
SCM3YDL139C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.84□□□□□ -1.47not detected
SCM3YDL139C DED1P06634 604 aaKnown RBP5.84□□□□□ -1.47
SCM3YDL139C MATALPHA2P0CY08 210 aa5.84□□□□□ -1.47
SCM3YDL139C HMLALPHA2P0CY09 210 aa5.84□□□□□ -1.47
SCM3YDL139C BIK1P11709 440 aa5.84□□□□□ -1.47
SCM3YDL139C SRP54P20424 541 aaKnown RBP5.84□□□□□ -1.47
SCM3YDL139C SWI4P25302 1093 aaKnown RBP5.84□□□□□ -1.47
SCM3YDL139C RAD27P26793 382 aa5.84□□□□□ -1.47
SCM3YDL139C MDL2P33311 773 aa5.84□□□□□ -1.47
SCM3YDL139C YKL069WP36088 180 aa5.84□□□□□ -1.47
SCM3YDL139C ARL1P38116 183 aaKnown RBP5.84□□□□□ -1.47
SCM3YDL139C MAL33P38157 468 aa5.84□□□□□ -1.47
SCM3YDL139C RKM3P38222 552 aa5.84□□□□□ -1.47
SCM3YDL139C RPN10P38886 268 aaKnown RBP5.84□□□□□ -1.47
SCM3YDL139C IOC3P43596 787 aa5.84□□□□□ -1.47
SCM3YDL139C GCV1P48015 400 aa5.84□□□□□ -1.47
SCM3YDL139C CTR1P49573 406 aa5.84□□□□□ -1.47
SCM3YDL139C VPS4P52917 437 aa5.84□□□□□ -1.47
SCM3YDL139C MTC3P53077 123 aa5.84□□□□□ -1.47
SCM3YDL139C RSC1P53236 928 aa5.84□□□□□ -1.47
SCM3YDL139C UTP5Q04177 643 aaKnown RBP5.84□□□□□ -1.47
SCM3YDL139C VMS1Q04311 632 aaKnown RBP5.84□□□□□ -1.47
SCM3YDL139C TMA46Q12000 345 aaKnown RBP5.84□□□□□ -1.47
SCM3YDL139C FAL1Q12099 399 aaKnown RBP5.84□□□□□ -1.47
SCM3YDL139C YLL054CQ12244 843 aa5.84□□□□□ -1.47
SCM3YDL139C AIM44Q99299 758 aa5.84□□□□□ -1.47
SCM3YDL139C MSB1P21339 1137 aaKnown RBP5.83□□□□□ -1.48
SCM3YDL139C URA1P28272 314 aaPredicted RBP5.83□□□□□ -1.48
SCM3YDL139C ANP1P32629 500 aa5.83□□□□□ -1.48
SCM3YDL139C AFG2P32794 780 aa5.83□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 172.4 ms