RNA–Protein interactions for RNA: YDL113C

ATG20, Transcript of Sorting nexin family member, yeastyeast

Gene ATG20, Length 1,923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG20YDL113C CDC48P25694 835 aaKnown RBP5.68□□□□□ -1.5
ATG20YDL113C PGM1P33401 570 aaKnown RBP5.68□□□□□ -1.5
ATG20YDL113C REI1P38344 393 aaPredicted RBP5.68□□□□□ -1.5
ATG20YDL113C ERC1P38767 581 aa5.68□□□□□ -1.5
ATG20YDL113C RPN3P40016 523 aaKnown RBP5.68□□□□□ -1.5
ATG20YDL113C GPD2P41911 440 aaKnown RBP5.68□□□□□ -1.5
ATG20YDL113C ROG3P43602 733 aa5.68□□□□□ -1.5
ATG20YDL113C TCB2P48231 1178 aa5.68□□□□□ -1.5
ATG20YDL113C TAD1P53065 400 aa5.68□□□□□ -1.5
ATG20YDL113C ARK1P53974 638 aa5.68□□□□□ -1.5
ATG20YDL113C VPS16Q03308 798 aa5.68□□□□□ -1.5
ATG20YDL113C PUS5Q06244 254 aa5.68□□□□□ -1.5
ATG20YDL113C CRD1Q07560 283 aa5.68□□□□□ -1.5
ATG20YDL113C YDR461C-AQ2V2P7 80 aa5.68□□□□□ -1.5
ATG20YDL113C SRD1P09007 221 aa5.67□□□□□ -1.5
ATG20YDL113C SSB1P11484 613 aaKnown RBP5.67□□□□□ -1.5
ATG20YDL113C UTR4P32626 227 aa5.67□□□□□ -1.5
ATG20YDL113C NIP100P33420 868 aa5.67□□□□□ -1.5
ATG20YDL113C YKL023WP36103 277 aaKnown RBP5.67□□□□□ -1.5
ATG20YDL113C CCC2P38995 1004 aa5.67□□□□□ -1.5
ATG20YDL113C PEA2P40091 420 aa5.67□□□□□ -1.5
ATG20YDL113C SSB2P40150 613 aaKnown RBP5.67□□□□□ -1.5
ATG20YDL113C NUP82P40368 713 aa5.67□□□□□ -1.5
ATG20YDL113C ALF1P53904 254 aa5.67□□□□□ -1.5
ATG20YDL113C FUS2Q05670 677 aa5.67□□□□□ -1.5
ATG20YDL113C PUN1Q06991 263 aa5.67□□□□□ -1.5
ATG20YDL113C HTA1P04911 132 aaKnown RBP5.66□□□□□ -1.5
ATG20YDL113C HTA2P04912 132 aa5.66□□□□□ -1.5
ATG20YDL113C TSR4P25040 408 aa5.66□□□□□ -1.5
ATG20YDL113C RAD57P25301 460 aa5.66□□□□□ -1.5
ATG20YDL113C CDC60P26637 1090 aaKnown RBP5.66□□□□□ -1.5
ATG20YDL113C SUV3P32580 737 aa5.66□□□□□ -1.5
ATG20YDL113C SMC1P32908 1225 aa5.66□□□□□ -1.5
ATG20YDL113C OCT1P35999 772 aa5.66□□□□□ -1.5
ATG20YDL113C RRP14P36080 434 aaKnown RBP5.66□□□□□ -1.5
ATG20YDL113C NDC80P40460 691 aa5.66□□□□□ -1.5
ATG20YDL113C CCM1P48237 864 aaPredicted RBP5.66□□□□□ -1.5
ATG20YDL113C PEX21P50091 288 aa5.66□□□□□ -1.5
ATG20YDL113C UTP5Q04177 643 aaKnown RBP5.66□□□□□ -1.5
ATG20YDL113C RBA50Q04418 439 aa5.66□□□□□ -1.5
ATG20YDL113C SPR28Q04921 423 aa5.66□□□□□ -1.5
ATG20YDL113C SPH1Q06160 661 aa5.66□□□□□ -1.5
ATG20YDL113C ERF2Q06551 359 aa5.66□□□□□ -1.5
ATG20YDL113C FRA1Q07825 749 aa5.66□□□□□ -1.5
ATG20YDL113C GPI13Q07830 1017 aa5.66□□□□□ -1.5
ATG20YDL113C YOL036WQ08206 761 aa5.66□□□□□ -1.5
ATG20YDL113C TCO89Q08921 799 aa5.66□□□□□ -1.5
ATG20YDL113C YPL277CQ08989 487 aa5.66□□□□□ -1.5
ATG20YDL113C PIN2Q12057 282 aa5.66□□□□□ -1.5
ATG20YDL113C TOM1Q03280 3268 aa5.66□□□□□ -1.5
ATG20YDL113C MRF1P30775 413 aaPredicted RBP5.66□□□□□ -1.5
ATG20YDL113C YMR124WP39523 943 aaKnown RBP5.66□□□□□ -1.5
ATG20YDL113C EFM4P40516 257 aa5.66□□□□□ -1.5
ATG20YDL113C CNM67P53865 581 aaKnown RBP5.66□□□□□ -1.5
ATG20YDL113C BOP3P53958 396 aa5.66□□□□□ -1.5
ATG20YDL113C RPN4Q03465 531 aa5.66□□□□□ -1.5
ATG20YDL113C SOV1Q04748 898 aa5.66□□□□□ -1.5
ATG20YDL113C YPR084WQ06821 456 aa5.66□□□□□ -1.5
ATG20YDL113C PGK1P00560 416 aaKnown RBP5.65□□□□□ -1.51
ATG20YDL113C PRP22P24384 1145 aaKnown RBP5.65□□□□□ -1.51
ATG20YDL113C APL1P27351 700 aa5.65□□□□□ -1.51
ATG20YDL113C MCR1P36060 302 aaKnown RBP5.65□□□□□ -1.51
ATG20YDL113C JNM1P36224 373 aa5.65□□□□□ -1.51
ATG20YDL113C MCX1P38323 520 aaPredicted RBP5.65□□□□□ -1.51
ATG20YDL113C SMF1P38925 575 aa5.65□□□□□ -1.51
ATG20YDL113C MMM1P41800 426 aa5.65□□□□□ -1.51
ATG20YDL113C NCS2P53923 493 aaPredicted RBP5.65□□□□□ -1.51
ATG20YDL113C PTA1Q01329 785 aaPredicted RBP5.65□□□□□ -1.51
ATG20YDL113C GIR2Q03768 265 aaPredicted RBP5.65□□□□□ -1.51
ATG20YDL113C SML1Q04964 104 aa5.65□□□□□ -1.51
ATG20YDL113C VAC14Q06708 880 aa5.65□□□□□ -1.51
ATG20YDL113C MLH2Q07980 695 aa5.65□□□□□ -1.51
ATG20YDL113C MED1Q12321 566 aa5.65□□□□□ -1.51
ATG20YDL113C KEX2P13134 814 aa5.64□□□□□ -1.51
ATG20YDL113C SEC23P15303 768 aaKnown RBP5.64□□□□□ -1.51
ATG20YDL113C VMA2P16140 517 aaKnown RBP5.64□□□□□ -1.51
ATG20YDL113C PAP1P29468 568 aaKnown RBP5.64□□□□□ -1.51
ATG20YDL113C YGL015CP33199 130 aa5.64□□□□□ -1.51
ATG20YDL113C LTV1P34078 463 aa5.64□□□□□ -1.51
ATG20YDL113C MCD4P36051 919 aa5.64□□□□□ -1.51
ATG20YDL113C FIS1P40515 155 aa5.64□□□□□ -1.51
ATG20YDL113C AVT1P47082 602 aa5.64□□□□□ -1.51
ATG20YDL113C UBP15P50101 1230 aa5.64□□□□□ -1.51
ATG20YDL113C SEC5P89102 971 aa5.64□□□□□ -1.51
ATG20YDL113C SLD5Q03406 294 aa5.64□□□□□ -1.51
ATG20YDL113C UTP14Q04500 899 aaKnown RBP5.64□□□□□ -1.51
ATG20YDL113C PHM6Q05637 104 aa5.64□□□□□ -1.51
ATG20YDL113C NOC3Q07896 663 aaPredicted RBP5.64□□□□□ -1.51
ATG20YDL113C FAL1Q12099 399 aaKnown RBP5.64□□□□□ -1.51
ATG20YDL113C PET111P08468 800 aa5.64□□□□□ -1.51
ATG20YDL113C CHS2P14180 963 aa5.64□□□□□ -1.51
ATG20YDL113C DBP5P20449 482 aaKnown RBP5.64□□□□□ -1.51
ATG20YDL113C PER1P25625 357 aa5.64□□□□□ -1.51
ATG20YDL113C REG2P38232 338 aa5.64□□□□□ -1.51
ATG20YDL113C SET5P38890 526 aaKnown RBP5.64□□□□□ -1.51
ATG20YDL113C SMC2P38989 1170 aaKnown RBP5.64□□□□□ -1.51
ATG20YDL113C HUL5P53119 910 aa5.64□□□□□ -1.51
ATG20YDL113C SUB1P54000 292 aaKnown RBP5.64□□□□□ -1.51
ATG20YDL113C YPR078CQ06813 372 aa5.64□□□□□ -1.51
ATG20YDL113C NEW1Q08972 1196 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms