RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC7	YDL017W	MIC19	P43594	170 aa		7.64	□□□□□ -1.19
CDC7	YDL017W	CWC22	P53333	577 aa	Known RBP	7.64	□□□□□ -1.19
CDC7	YDL017W	TIM8	P57744	87 aa		7.64	□□□□□ -1.19
CDC7	YDL017W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	7.64	□□□□□ -1.19	not detected
CDC7	YDL017W	VTI1	Q04338	217 aa		7.64	□□□□□ -1.19
CDC7	YDL017W	MSH1	P25846	959 aa		7.63	□□□□□ -1.19
CDC7	YDL017W	GCG1	P32656	232 aa	Known RBP	7.63	□□□□□ -1.19
CDC7	YDL017W	YKR018C	P36114	725 aa		7.63	□□□□□ -1.19
CDC7	YDL017W	ERC1	P38767	581 aa		7.63	□□□□□ -1.19
CDC7	YDL017W	KAP114	P53067	1004 aa		7.63	□□□□□ -1.19
CDC7	YDL017W	VTC3	Q02725	835 aa		7.63	□□□□□ -1.19
CDC7	YDL017W	SYH1	Q02875	849 aa	Known RBP	7.63	□□□□□ -1.19
CDC7	YDL017W	CWC15	Q03772	175 aa	Known RBP	7.63	□□□□□ -1.19
CDC7	YDL017W	GYL1	Q04322	720 aa		7.63	□□□□□ -1.19
CDC7	YDL017W	DON1	Q05610	365 aa		7.63	□□□□□ -1.19
CDC7	YDL017W	NAM7	P30771	971 aa	Known RBP	7.62	□□□□□ -1.19
CDC7	YDL017W	RAD54	P32863	898 aa		7.62	□□□□□ -1.19
CDC7	YDL017W	PNT1	P38969	423 aa		7.62	□□□□□ -1.19
CDC7	YDL017W	RRD1	P40454	393 aa	Known RBP	7.62	□□□□□ -1.19
CDC7	YDL017W	SGM1	P47166	707 aa		7.62	□□□□□ -1.19
CDC7	YDL017W	HUL5	P53119	910 aa		7.62	□□□□□ -1.19
CDC7	YDL017W	TAM41	P53230	385 aa		7.62	□□□□□ -1.19
CDC7	YDL017W	DIG1	Q03063	452 aa	Known RBP	7.62	□□□□□ -1.19
CDC7	YDL017W	URH1	Q04179	340 aa		7.62	□□□□□ -1.19
CDC7	YDL017W	CDC53	Q12018	815 aa	Known RBP	7.62	□□□□□ -1.19
CDC7	YDL017W	NCR1	Q12200	1170 aa		7.62	□□□□□ -1.19
CDC7	YDL017W	CDC8	P00572	216 aa		7.62	□□□□□ -1.19
CDC7	YDL017W	VMA2	P16140	517 aa	Known RBP	7.62	□□□□□ -1.19
CDC7	YDL017W	KIP1	P28742	1111 aa		7.62	□□□□□ -1.19
CDC7	YDL017W	ATG19	P35193	415 aa		7.62	□□□□□ -1.19
CDC7	YDL017W	MCD4	P36051	919 aa		7.62	□□□□□ -1.19
CDC7	YDL017W	RCK2	P38623	610 aa		7.62	□□□□□ -1.19
CDC7	YDL017W	GPB2	P39717	880 aa		7.62	□□□□□ -1.19
CDC7	YDL017W	CTK3	P46963	296 aa	Predicted RBP	7.62	□□□□□ -1.19
CDC7	YDL017W	ROD1	Q02805	837 aa		7.62	□□□□□ -1.19
CDC7	YDL017W	YML082W	Q04533	649 aa	Known RBP	7.62	□□□□□ -1.19
CDC7	YDL017W	ERP3	Q12403	225 aa		7.62	□□□□□ -1.19
CDC7	YDL017W	YDL206W	Q12424	762 aa		7.62	□□□□□ -1.19
CDC7	YDL017W	TKL1	P23254	680 aa	Known RBP	7.61	□□□□□ -1.19
CDC7	YDL017W	CDC48	P25694	835 aa	Known RBP	7.61	□□□□□ -1.19
CDC7	YDL017W	MUD1	P32605	298 aa	Known RBP	7.61	□□□□□ -1.19
CDC7	YDL017W	COT1	P32798	439 aa		7.61	□□□□□ -1.19
CDC7	YDL017W	VPS35	P34110	944 aa		7.61	□□□□□ -1.19
CDC7	YDL017W	BLI1	P35727	113 aa		7.61	□□□□□ -1.19
CDC7	YDL017W	YKL050C	P35736	922 aa		7.61	□□□□□ -1.19
CDC7	YDL017W	TRZ1	P36159	838 aa	Predicted RBP	7.61	□□□□□ -1.19
CDC7	YDL017W	PTC4	P38089	393 aa		7.61	□□□□□ -1.19
CDC7	YDL017W	HMF1	P40037	129 aa	Known RBP	7.61	□□□□□ -1.19
CDC7	YDL017W	AVT1	P47082	602 aa		7.61	□□□□□ -1.19
CDC7	YDL017W	UBP15	P50101	1230 aa		7.61	□□□□□ -1.19
CDC7	YDL017W	ENV11	P53246	860 aa		7.61	□□□□□ -1.19
CDC7	YDL017W	YGR125W	P53273	1036 aa		7.61	□□□□□ -1.19
CDC7	YDL017W	SVF1	Q05515	481 aa		7.61	□□□□□ -1.19
CDC7	YDL017W	PUS5	Q06244	254 aa		7.61	□□□□□ -1.19
CDC7	YDL017W	SLX4	Q12098	748 aa		7.61	□□□□□ -1.19
CDC7	YDL017W	QCR6	P00127	147 aa		7.6	□□□□□ -1.19
CDC7	YDL017W	CDC19	P00549	500 aa	Known RBP	7.6	□□□□□ -1.19
CDC7	YDL017W	SNF1	P06782	633 aa	Known RBP	7.6	□□□□□ -1.19
CDC7	YDL017W	ECM32	P32644	1121 aa	Known RBP	7.6	□□□□□ -1.19
CDC7	YDL017W	TVP38	P36164	337 aa		7.6	□□□□□ -1.19
CDC7	YDL017W	REG2	P38232	338 aa		7.6	□□□□□ -1.19
CDC7	YDL017W	NET1	P47035	1189 aa		7.6	□□□□□ -1.19
CDC7	YDL017W	VPS70	P47161	811 aa		7.6	□□□□□ -1.19
CDC7	YDL017W	RRT6	P53117	311 aa	Predicted RBP	7.6	□□□□□ -1.19
CDC7	YDL017W	YMR018W	Q04364	514 aa		7.6	□□□□□ -1.19
CDC7	YDL017W	ECI1	Q05871	280 aa		7.6	□□□□□ -1.19
CDC7	YDL017W	NOC3	Q07896	663 aa	Predicted RBP	7.6	□□□□□ -1.19
CDC7	YDL017W	SMC5	Q08204	1093 aa		7.6	□□□□□ -1.19
CDC7	YDL017W	ZRT2	Q12436	422 aa		7.6	□□□□□ -1.19
CDC7	YDL017W	DED1	P06634	604 aa	Known RBP	7.59	□□□□□ -1.19
CDC7	YDL017W	SEC21	P32074	935 aa	Known RBP	7.59	□□□□□ -1.19
CDC7	YDL017W	LAS1	P36146	502 aa	Predicted RBP	7.59	□□□□□ -1.19
CDC7	YDL017W	EXO5	P38289	585 aa		7.59	□□□□□ -1.19
CDC7	YDL017W	VPS29	P38759	282 aa		7.59	□□□□□ -1.19
CDC7	YDL017W	VPS41	P38959	992 aa		7.59	□□□□□ -1.19
CDC7	YDL017W	SAP1	P39955	897 aa	Known RBP	7.59	□□□□□ -1.19
CDC7	YDL017W	VPS53	P47061	822 aa		7.59	□□□□□ -1.19
CDC7	YDL017W	RPC17	P47076	161 aa		7.59	□□□□□ -1.19
CDC7	YDL017W	YAF9	P53930	226 aa		7.59	□□□□□ -1.19
CDC7	YDL017W	DUS4	Q06063	367 aa		7.59	□□□□□ -1.19
CDC7	YDL017W	SFH1	Q06168	426 aa		7.59	□□□□□ -1.19
CDC7	YDL017W	VMA1	P17255	1071 aa	Known RBP	7.58	□□□□□ -1.2
CDC7	YDL017W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	7.58	□□□□□ -1.2	not detected
CDC7	YDL017W	CDC11	P32458	415 aa		7.58	□□□□□ -1.2
CDC7	YDL017W	DBP7	P36120	742 aa	Known RBP	7.58	□□□□□ -1.2
CDC7	YDL017W	RGD1	P38339	666 aa		7.58	□□□□□ -1.2
CDC7	YDL017W	PSY2	P40164	858 aa		7.58	□□□□□ -1.2
CDC7	YDL017W	RTT102	P53330	157 aa		7.58	□□□□□ -1.2
CDC7	YDL017W	MRS2	Q01926	470 aa		7.58	□□□□□ -1.2
CDC7	YDL017W	EEB1	Q02891	456 aa		7.58	□□□□□ -1.2
CDC7	YDL017W	COQ9	Q05779	260 aa		7.58	□□□□□ -1.2
CDC7	YDL017W	APL5	Q08951	932 aa	Known RBP	7.58	□□□□□ -1.2
CDC7	YDL017W	CFT2	Q12102	859 aa	Predicted RBP	7.58	□□□□□ -1.2
CDC7	YDL017W	RAD1	P06777	1100 aa		7.57	□□□□□ -1.2
CDC7	YDL017W	SPT2	P06843	333 aa	Predicted RBP	7.57	□□□□□ -1.2
CDC7	YDL017W	CDC33	P07260	213 aa	Known RBP	7.57	□□□□□ -1.2
CDC7	YDL017W	PKC1	P24583	1151 aa		7.57	□□□□□ -1.2
CDC7	YDL017W	EUG1	P32474	517 aa		7.57	□□□□□ -1.2
CDC7	YDL017W	SEC8	P32855	1065 aa		7.57	□□□□□ -1.2
CDC7	YDL017W	OLA1	P38219	394 aa	Known RBP	7.57	□□□□□ -1.2

Retrieved 100 of 5,963 RNA–protein pairs in 6.8 ms