RNA–Protein interactions for RNA: YCL059C

KRR1, Transcript of Nucleolar protein required for rRNA synthesis and ribosomal assembly, yeastyeast

Gene KRR1, Length 951 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KRR1YCL059C ZPR1P53303 486 aaKnown RBP9.05□□□□□ -0.96
KRR1YCL059C DIP5P53388 608 aa9.05□□□□□ -0.96
KRR1YCL059C ESBP6P53918 673 aa9.05□□□□□ -0.96
KRR1YCL059C TIM8P57744 87 aa9.05□□□□□ -0.96
KRR1YCL059C CEF1Q03654 590 aaPredicted RBP9.05□□□□□ -0.96
KRR1YCL059C PHM6Q05637 104 aa9.05□□□□□ -0.96
KRR1YCL059C CRD1Q07560 283 aa9.05□□□□□ -0.96
KRR1YCL059C YPL225WQ08971 146 aaKnown RBP9.05□□□□□ -0.96
KRR1YCL059C HIF1Q12373 385 aa9.05□□□□□ -0.96
KRR1YCL059C YBL111CQ3E7Y5 667 aa9.05□□□□□ -0.96
KRR1YCL059C YOL087CQ99247 1116 aa9.05□□□□□ -0.96
KRR1YCL059C FLO1P32768 1537 aa9.05□□□□□ -0.96
KRR1YCL059C PGK1P00560 416 aaKnown RBP9.04□□□□□ -0.96
KRR1YCL059C CBP1P07252 654 aa9.04□□□□□ -0.96
KRR1YCL059C SSD1P24276 1250 aaKnown RBP RIP-Chip data9.04□□□□□ -0.96not detected
KRR1YCL059C CDC10P25342 322 aaKnown RBP9.04□□□□□ -0.96
KRR1YCL059C DBF4P32325 704 aa9.04□□□□□ -0.96
KRR1YCL059C SUV3P32580 737 aa9.04□□□□□ -0.96
KRR1YCL059C TFC4P33339 1025 aa9.04□□□□□ -0.96
KRR1YCL059C RIM101P33400 625 aa9.04□□□□□ -0.96
KRR1YCL059C YKR018CP36114 725 aa9.04□□□□□ -0.96
KRR1YCL059C RCK2P38623 610 aa9.04□□□□□ -0.96
KRR1YCL059C HIS2P38635 335 aa9.04□□□□□ -0.96
KRR1YCL059C NDT80P38830 627 aa9.04□□□□□ -0.96
KRR1YCL059C CUR1Q06469 252 aa9.04□□□□□ -0.96
KRR1YCL059C SIL1Q08199 421 aa9.04□□□□□ -0.96
KRR1YCL059C FAL1Q12099 399 aaKnown RBP9.04□□□□□ -0.96
KRR1YCL059C TUB2P02557 457 aaKnown RBP9.03□□□□□ -0.96
KRR1YCL059C ARG4P04076 463 aaPredicted RBP9.03□□□□□ -0.96
KRR1YCL059C ADH4P10127 382 aa9.03□□□□□ -0.96
KRR1YCL059C ERG11P10614 530 aa9.03□□□□□ -0.96
KRR1YCL059C RAD18P10862 487 aa9.03□□□□□ -0.96
KRR1YCL059C KRS1P15180 591 aaKnown RBP9.03□□□□□ -0.96
KRR1YCL059C CBF2P32504 956 aa9.03□□□□□ -0.96
KRR1YCL059C LOS1P33418 1100 aaPredicted RBP9.03□□□□□ -0.96
KRR1YCL059C OAF3P36023 863 aa9.03□□□□□ -0.96
KRR1YCL059C TRZ1P36159 838 aaPredicted RBP9.03□□□□□ -0.96
KRR1YCL059C CDC27P38042 758 aa9.03□□□□□ -0.96
KRR1YCL059C RRT2P38332 387 aa9.03□□□□□ -0.96
KRR1YCL059C ECM1P39715 212 aa9.03□□□□□ -0.96
KRR1YCL059C ATG36P46983 293 aa9.03□□□□□ -0.96
KRR1YCL059C TAD1P53065 400 aa9.03□□□□□ -0.96
KRR1YCL059C MTC3P53077 123 aa9.03□□□□□ -0.96
KRR1YCL059C PUF3Q07807 879 aaKnown RBP RIP-Chip data9.03□□□□□ -0.96not detected
KRR1YCL059C VHS3Q08438 674 aa9.03□□□□□ -0.96
KRR1YCL059C OSW2Q12202 724 aa9.03□□□□□ -0.96
KRR1YCL059C TRP2P00899 507 aaKnown RBP9.02□□□□□ -0.97
KRR1YCL059C SPT2P06843 333 aaPredicted RBP9.02□□□□□ -0.97
KRR1YCL059C HPR1P17629 752 aaKnown RBP9.02□□□□□ -0.97
KRR1YCL059C PRE10P21242 288 aaKnown RBP RIP-Chip data9.02□□□□□ -0.97not detected
KRR1YCL059C PIN4P34217 668 aaKnown RBP RIP-Chip data9.02□□□□□ -0.97not detected
KRR1YCL059C YSW1P38280 609 aa9.02□□□□□ -0.97
KRR1YCL059C UBP5P39944 805 aa9.02□□□□□ -0.97
KRR1YCL059C LCP5P40079 357 aaPredicted RBP9.02□□□□□ -0.97
KRR1YCL059C SAP185P40856 1058 aa9.02□□□□□ -0.97
KRR1YCL059C YDL057WQ07379 328 aa9.02□□□□□ -0.97
KRR1YCL059C NOC3Q07896 663 aaPredicted RBP9.02□□□□□ -0.97
KRR1YCL059C SMC5Q08204 1093 aa9.02□□□□□ -0.97
KRR1YCL059C KIP1P28742 1111 aa9.01□□□□□ -0.97
KRR1YCL059C MUD1P32605 298 aaKnown RBP9.01□□□□□ -0.97
KRR1YCL059C RRN6P32786 894 aa9.01□□□□□ -0.97
KRR1YCL059C YSC83P32792 385 aa9.01□□□□□ -0.97
KRR1YCL059C YME1P32795 747 aa9.01□□□□□ -0.97
KRR1YCL059C UGA4P32837 571 aa9.01□□□□□ -0.97
KRR1YCL059C CCL1P37366 393 aa9.01□□□□□ -0.97
KRR1YCL059C EXO5P38289 585 aa9.01□□□□□ -0.97
KRR1YCL059C KEL1P38853 1164 aaKnown RBP9.01□□□□□ -0.97
KRR1YCL059C SSP1P38871 571 aa9.01□□□□□ -0.97
KRR1YCL059C TIF4631P39935 952 aaKnown RBP9.01□□□□□ -0.97
KRR1YCL059C GPD2P41911 440 aaKnown RBP9.01□□□□□ -0.97
KRR1YCL059C FIG4P42837 879 aa9.01□□□□□ -0.97
KRR1YCL059C VPS53P47061 822 aa9.01□□□□□ -0.97
KRR1YCL059C UBP3Q01477 912 aaKnown RBP RIP-Chip data9.01□□□□□ -0.97 RIP-Chip
KRR1YCL059C DIG1Q03063 452 aaKnown RBP9.01□□□□□ -0.97
KRR1YCL059C DON1Q05610 365 aa9.01□□□□□ -0.97
KRR1YCL059C FRA1Q07825 749 aa9.01□□□□□ -0.97
KRR1YCL059C TAF10Q12030 206 aa9.01□□□□□ -0.97
KRR1YCL059C PMD1P32634 1753 aa9□□□□□ -0.97
KRR1YCL059C MRPL25P23369 157 aa9□□□□□ -0.97
KRR1YCL059C ILV6P25605 309 aaKnown RBP9□□□□□ -0.97
KRR1YCL059C PHO88P38264 188 aaPredicted RBP9□□□□□ -0.97
KRR1YCL059C YTA12P40341 825 aa9□□□□□ -0.97
KRR1YCL059C FIS1P40515 155 aa9□□□□□ -0.97
KRR1YCL059C YNL320WP42840 284 aa9□□□□□ -0.97
KRR1YCL059C BRO1P48582 844 aa9□□□□□ -0.97
KRR1YCL059C YAF9P53930 226 aa9□□□□□ -0.97
KRR1YCL059C ALD6P54115 500 aaKnown RBP9□□□□□ -0.97
KRR1YCL059C KIN4Q01919 800 aa9□□□□□ -0.97
KRR1YCL059C TBF1Q02457 562 aa9□□□□□ -0.97
KRR1YCL059C FLO11P08640 1367 aa8.99□□□□□ -0.97
KRR1YCL059C ESS1P22696 170 aa8.99□□□□□ -0.97
KRR1YCL059C NAM7P30771 971 aaKnown RBP8.99□□□□□ -0.97
KRR1YCL059C GLC3P32775 704 aa8.99□□□□□ -0.97
KRR1YCL059C RAD54P32863 898 aa8.99□□□□□ -0.97
KRR1YCL059C MED8P38304 223 aa8.99□□□□□ -0.97
KRR1YCL059C YML037CQ03703 340 aa8.99□□□□□ -0.97
KRR1YCL059C ATG16Q03818 150 aa8.99□□□□□ -0.97
KRR1YCL059C RGA2Q06407 1009 aa8.99□□□□□ -0.97
KRR1YCL059C ATG20Q07528 640 aa8.99□□□□□ -0.97
KRR1YCL059C PMS1P14242 873 aa8.98□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms