RNA–Protein interactions for RNA: YHR113W

APE4, Transcript of Cytoplasmic aspartyl aminopeptidase with possible vacuole function, yeastyeast

Gene APE4, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APE4YHR113W KIN82P25341 720 aa7.6□□□□□ -1.19
APE4YHR113W RRM3P38766 723 aa7.6□□□□□ -1.19
APE4YHR113W ERC1P38767 581 aa7.6□□□□□ -1.19
APE4YHR113W SNF7P39929 240 aaKnown RBP7.6□□□□□ -1.19
APE4YHR113W NUP82P40368 713 aa7.6□□□□□ -1.19
APE4YHR113W SSD1P24276 1250 aaKnown RBP RIP-Chip data7.59□□□□□ -1.19not detected
APE4YHR113W GUA1P38625 525 aaKnown RBP7.59□□□□□ -1.19
APE4YHR113W AFT2Q08957 416 aa7.59□□□□□ -1.19
APE4YHR113W RPL22AP05749 121 aaKnown RBP7.58□□□□□ -1.2
APE4YHR113W OM45P16547 393 aa7.58□□□□□ -1.2
APE4YHR113W AFT1P22149 690 aa7.58□□□□□ -1.2
APE4YHR113W DUR3P33413 735 aa7.58□□□□□ -1.2
APE4YHR113W INP51P40559 946 aaKnown RBP7.58□□□□□ -1.2
APE4YHR113W REF2P42073 533 aaPredicted RBP7.58□□□□□ -1.2
APE4YHR113W YFL034WP43564 1073 aa7.58□□□□□ -1.2
APE4YHR113W SAD1P43589 448 aa7.58□□□□□ -1.2
APE4YHR113W LSC2P53312 427 aa7.58□□□□□ -1.2
APE4YHR113W SEC5P89102 971 aa7.58□□□□□ -1.2
APE4YHR113W COQ9Q05779 260 aa7.58□□□□□ -1.2
APE4YHR113W UBC1P21734 215 aaKnown RBP7.57□□□□□ -1.2
APE4YHR113W PSO2P30620 661 aa7.57□□□□□ -1.2
APE4YHR113W EFT1P32324 842 aaKnown RBP7.57□□□□□ -1.2
APE4YHR113W YKL091CP33324 310 aaKnown RBP7.57□□□□□ -1.2
APE4YHR113W EDS1P38073 919 aa7.57□□□□□ -1.2
APE4YHR113W UBP13P38187 747 aa7.57□□□□□ -1.2
APE4YHR113W BIM1P40013 344 aa7.57□□□□□ -1.2
APE4YHR113W TGL3P40308 642 aa7.57□□□□□ -1.2
APE4YHR113W AIM21P40563 679 aa7.57□□□□□ -1.2
APE4YHR113W YAP5P40574 245 aa7.57□□□□□ -1.2
APE4YHR113W TOS3P43637 560 aa7.57□□□□□ -1.2
APE4YHR113W SGM1P47166 707 aa7.57□□□□□ -1.2
APE4YHR113W ROD1Q02805 837 aa7.57□□□□□ -1.2
APE4YHR113W YML020WQ03722 664 aa7.57□□□□□ -1.2
APE4YHR113W GFD1Q04839 188 aaKnown RBP7.57□□□□□ -1.2
APE4YHR113W SPP382Q06411 708 aaPredicted RBP7.57□□□□□ -1.2
APE4YHR113W YDL057WQ07379 328 aa7.57□□□□□ -1.2
APE4YHR113W OSW2Q12202 724 aa7.57□□□□□ -1.2
APE4YHR113W HIF1Q12373 385 aa7.57□□□□□ -1.2
APE4YHR113W MOT1P32333 1867 aa7.56□□□□□ -1.2
APE4YHR113W MSS51P32335 436 aa7.56□□□□□ -1.2
APE4YHR113W VPS35P34110 944 aa7.56□□□□□ -1.2
APE4YHR113W PGM2P37012 569 aaKnown RBP7.56□□□□□ -1.2
APE4YHR113W CCM1P48237 864 aaPredicted RBP7.56□□□□□ -1.2
APE4YHR113W AZR1P50080 613 aa7.56□□□□□ -1.2
APE4YHR113W NBP1P52919 319 aaPredicted RBP7.56□□□□□ -1.2
APE4YHR113W RTT102P53330 157 aa7.56□□□□□ -1.2
APE4YHR113W YNR021WP53723 404 aaKnown RBP7.56□□□□□ -1.2
APE4YHR113W ARK1P53974 638 aa7.56□□□□□ -1.2
APE4YHR113W HCR1Q05775 265 aaKnown RBP7.56□□□□□ -1.2
APE4YHR113W YPL277CQ08989 487 aa7.56□□□□□ -1.2
APE4YHR113W HFI1Q12060 488 aa7.56□□□□□ -1.2
APE4YHR113W CDC37P06101 506 aaKnown RBP7.55□□□□□ -1.2
APE4YHR113W PCK1P10963 549 aa7.55□□□□□ -1.2
APE4YHR113W DAL7P21826 554 aa7.55□□□□□ -1.2
APE4YHR113W GSY2P27472 705 aa7.55□□□□□ -1.2
APE4YHR113W MRF1P30775 413 aaPredicted RBP7.55□□□□□ -1.2
APE4YHR113W YSC83P32792 385 aa7.55□□□□□ -1.2
APE4YHR113W YPL034WQ03083 165 aa7.55□□□□□ -1.2
APE4YHR113W YDR524C-BQ3E6R4 66 aa7.55□□□□□ -1.2
APE4YHR113W WHI2P12611 486 aa7.55□□□□□ -1.2
APE4YHR113W RME1P32338 300 aaKnown RBP7.55□□□□□ -1.2
APE4YHR113W YEL1P34225 687 aa7.55□□□□□ -1.2
APE4YHR113W VID24P38263 362 aa7.55□□□□□ -1.2
APE4YHR113W RSC1P53236 928 aa7.55□□□□□ -1.2
APE4YHR113W KRE33P53914 1056 aaKnown RBP7.55□□□□□ -1.2
APE4YHR113W YNL115CP53925 644 aa7.55□□□□□ -1.2
APE4YHR113W SSL2Q00578 843 aa7.55□□□□□ -1.2
APE4YHR113W YDR090CQ03193 310 aa7.55□□□□□ -1.2
APE4YHR113W ECM30Q06673 1274 aa7.55□□□□□ -1.2
APE4YHR113W YOL075CQ08234 1294 aa7.55□□□□□ -1.2
APE4YHR113W IES4Q08561 116 aa7.55□□□□□ -1.2
APE4YHR113W PHO8P11491 566 aa7.54□□□□□ -1.2
APE4YHR113W ATE1P16639 503 aa7.54□□□□□ -1.2
APE4YHR113W POT1P27796 417 aaKnown RBP RIP-Chip data7.54□□□□□ -1.2not detected
APE4YHR113W COT1P32798 439 aa7.54□□□□□ -1.2
APE4YHR113W PTC3P34221 468 aaKnown RBP7.54□□□□□ -1.2
APE4YHR113W DRE2P36152 348 aa7.54□□□□□ -1.2
APE4YHR113W ADE17P38009 592 aaKnown RBP7.54□□□□□ -1.2
APE4YHR113W RKM3P38222 552 aa7.54□□□□□ -1.2
APE4YHR113W SPT8P38915 602 aa7.54□□□□□ -1.2
APE4YHR113W FIR1P40020 876 aa7.54□□□□□ -1.2
APE4YHR113W ALD5P40047 520 aaKnown RBP7.54□□□□□ -1.2
APE4YHR113W CUL3P53202 744 aa7.54□□□□□ -1.2
APE4YHR113W TAM41P53230 385 aa7.54□□□□□ -1.2
APE4YHR113W YNL146WP53906 100 aa7.54□□□□□ -1.2
APE4YHR113W TAF13P11747 167 aa7.53□□□□□ -1.2
APE4YHR113W TRK2P28584 889 aa7.53□□□□□ -1.2
APE4YHR113W MAC1P35192 417 aa7.53□□□□□ -1.2
APE4YHR113W HUL4P40985 892 aa7.53□□□□□ -1.2
APE4YHR113W YGR237CP50089 785 aa7.53□□□□□ -1.2
APE4YHR113W CUS1Q02554 436 aaPredicted RBP7.53□□□□□ -1.2
APE4YHR113W VTC3Q02725 835 aa7.53□□□□□ -1.2
APE4YHR113W FMP30Q02883 468 aa7.53□□□□□ -1.2
APE4YHR113W MLH2Q07980 695 aa7.53□□□□□ -1.2
APE4YHR113W YAP7Q08182 245 aa7.53□□□□□ -1.2
APE4YHR113W MED1Q12321 566 aa7.53□□□□□ -1.2
APE4YHR113W RIF1P29539 1916 aa7.53□□□□□ -1.2
APE4YHR113W VPS13Q07878 3144 aa7.52□□□□□ -1.21
APE4YHR113W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21 RIP-Chip
APE4YHR113W HEM1P09950 548 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 57.2 ms