RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W RAT1Q02792 1006 aaKnown RBP6.3□□□□□ -1.4
SKN1YGR143W SVL3Q03088 825 aaKnown RBP6.3□□□□□ -1.4
SKN1YGR143W FAR8Q05040 523 aa6.3□□□□□ -1.4
SKN1YGR143W ATG38Q05789 226 aaKnown RBP6.3□□□□□ -1.4
SKN1YGR143W GIC2Q06648 383 aa6.3□□□□□ -1.4
SKN1YGR143W YOL036WQ08206 761 aa6.3□□□□□ -1.4
SKN1YGR143W BRX1Q08235 291 aaKnown RBP6.3□□□□□ -1.4
SKN1YGR143W RTT10Q08924 1013 aa6.3□□□□□ -1.4
SKN1YGR143W ACF2Q12168 779 aa6.3□□□□□ -1.4
SKN1YGR143W DPH6Q12429 685 aa6.3□□□□□ -1.4
SKN1YGR143W OSH2Q12451 1283 aa6.3□□□□□ -1.4
SKN1YGR143W TRM1P15565 570 aaKnown RBP6.29□□□□□ -1.4
SKN1YGR143W SLA1P32790 1244 aa6.29□□□□□ -1.4
SKN1YGR143W YSW1P38280 609 aa6.29□□□□□ -1.4
SKN1YGR143W GCN20P43535 752 aaKnown RBP6.29□□□□□ -1.4
SKN1YGR143W HAM1P47119 197 aaKnown RBP6.29□□□□□ -1.4
SKN1YGR143W MPS2P53159 387 aa6.29□□□□□ -1.4
SKN1YGR143W KRE33P53914 1056 aaKnown RBP6.29□□□□□ -1.4
SKN1YGR143W NOB1Q08444 459 aaKnown RBP6.29□□□□□ -1.4
SKN1YGR143W RTC5Q12108 567 aaKnown RBP6.29□□□□□ -1.4
SKN1YGR143W ILS1P09436 1072 aaKnown RBP6.28□□□□□ -1.4
SKN1YGR143W MGM1P32266 881 aa6.28□□□□□ -1.4
SKN1YGR143W TFC3P34111 1160 aa6.28□□□□□ -1.4
SKN1YGR143W CAJ1P39101 391 aa6.28□□□□□ -1.4
SKN1YGR143W FMP10P40098 244 aa6.28□□□□□ -1.4
SKN1YGR143W YFL066CP43538 392 aa6.28□□□□□ -1.4
SKN1YGR143W SNZ3P43545 298 aa6.28□□□□□ -1.4
SKN1YGR143W URB2P47108 1174 aa6.28□□□□□ -1.4
SKN1YGR143W SNZ2P53824 298 aa6.28□□□□□ -1.4
SKN1YGR143W ADA2Q02336 434 aa6.28□□□□□ -1.4
SKN1YGR143W FDC1Q03034 503 aa6.28□□□□□ -1.4
SKN1YGR143W YMR018WQ04364 514 aa6.28□□□□□ -1.4
SKN1YGR143W TUF1P02992 437 aaKnown RBP6.28□□□□□ -1.4
SKN1YGR143W GCD2P12754 651 aaPredicted RBP6.28□□□□□ -1.4
SKN1YGR143W SUI2P20459 304 aaKnown RBP6.28□□□□□ -1.4
SKN1YGR143W SLX5P32828 619 aaKnown RBP6.28□□□□□ -1.4
SKN1YGR143W PFF1P38244 976 aa6.28□□□□□ -1.4
SKN1YGR143W PEX18P38855 283 aa6.28□□□□□ -1.4
SKN1YGR143W BFR1P38934 470 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
SKN1YGR143W RNR4P49723 345 aaKnown RBP6.28□□□□□ -1.4
SKN1YGR143W MFM1Q02783 413 aa6.28□□□□□ -1.4
SKN1YGR143W YOL057WQ08225 711 aa6.28□□□□□ -1.4
SKN1YGR143W SDH5Q08230 162 aa6.28□□□□□ -1.4
SKN1YGR143W GPR1Q12361 961 aa6.28□□□□□ -1.4
SKN1YGR143W RPP0P05317 312 aaKnown RBP6.27□□□□□ -1.41
SKN1YGR143W YML002WP0CF17 737 aa6.27□□□□□ -1.41
SKN1YGR143W PRP16P15938 1071 aaPredicted RBP6.27□□□□□ -1.41
SKN1YGR143W VAN1P23642 535 aa6.27□□□□□ -1.41
SKN1YGR143W POL4P25615 582 aa6.27□□□□□ -1.41
SKN1YGR143W ITR1P30605 584 aa6.27□□□□□ -1.41
SKN1YGR143W PEP7P32609 515 aa6.27□□□□□ -1.41
SKN1YGR143W DUR3P33413 735 aa6.27□□□□□ -1.41
SKN1YGR143W MRPL10P36520 322 aa6.27□□□□□ -1.41
SKN1YGR143W RRP8P38961 392 aaKnown RBP6.27□□□□□ -1.41
SKN1YGR143W FMS1P50264 508 aa6.27□□□□□ -1.41
SKN1YGR143W SQS1P53866 767 aaKnown RBP6.27□□□□□ -1.41
SKN1YGR143W SRT1Q03175 343 aa6.27□□□□□ -1.41
SKN1YGR143W SSB1P11484 613 aaKnown RBP6.27□□□□□ -1.41
SKN1YGR143W KIP2P28743 706 aa6.27□□□□□ -1.41
SKN1YGR143W RSM22P36056 628 aa6.27□□□□□ -1.41
SKN1YGR143W IFA38P38286 347 aa6.27□□□□□ -1.41
SKN1YGR143W SPT8P38915 602 aa6.27□□□□□ -1.41
SKN1YGR143W SMC2P38989 1170 aaKnown RBP6.27□□□□□ -1.41
SKN1YGR143W SSB2P40150 613 aaKnown RBP6.27□□□□□ -1.41
SKN1YGR143W ILM1P47155 203 aa6.27□□□□□ -1.41
SKN1YGR143W RSC3Q06639 885 aa6.27□□□□□ -1.41
SKN1YGR143W RRP6Q12149 733 aaKnown RBP6.27□□□□□ -1.41
SKN1YGR143W CDC16P09798 840 aa6.26□□□□□ -1.41
SKN1YGR143W YAP1P19880 650 aaKnown RBP6.26□□□□□ -1.41
SKN1YGR143W MXR1P40029 184 aa6.26□□□□□ -1.41
SKN1YGR143W TIM54P47045 478 aa6.26□□□□□ -1.41
SKN1YGR143W VPS53P47061 822 aa6.26□□□□□ -1.41
SKN1YGR143W ATH1P48016 1211 aa6.26□□□□□ -1.41
SKN1YGR143W FCP1Q03254 732 aa6.26□□□□□ -1.41
SKN1YGR143W POB3Q04636 552 aaKnown RBP6.26□□□□□ -1.41
SKN1YGR143W YPQ2Q06328 317 aa6.26□□□□□ -1.41
SKN1YGR143W MAG2Q06436 670 aaKnown RBP6.26□□□□□ -1.41
SKN1YGR143W YLH47Q06493 454 aa6.26□□□□□ -1.41
SKN1YGR143W OMS1Q06668 471 aa6.26□□□□□ -1.41
SKN1YGR143W TYR1P20049 452 aa6.26□□□□□ -1.41
SKN1YGR143W ITR2P30606 609 aa6.26□□□□□ -1.41
SKN1YGR143W YKR018CP36114 725 aa6.26□□□□□ -1.41
SKN1YGR143W YRO2P38079 344 aa6.26□□□□□ -1.41
SKN1YGR143W MAK5P38112 773 aaPredicted RBP6.26□□□□□ -1.41
SKN1YGR143W AMN1P38285 549 aaPredicted RBP6.26□□□□□ -1.41
SKN1YGR143W FZO1P38297 855 aa6.26□□□□□ -1.41
SKN1YGR143W PIH1P38768 344 aa6.26□□□□□ -1.41
SKN1YGR143W MNT3P40549 630 aa6.26□□□□□ -1.41
SKN1YGR143W ALB1P47019 175 aaPredicted RBP6.26□□□□□ -1.41
SKN1YGR143W IMD4P50094 524 aaKnown RBP6.26□□□□□ -1.41
SKN1YGR143W IPI3P53877 555 aa6.26□□□□□ -1.41
SKN1YGR143W TAF12Q03761 539 aa6.26□□□□□ -1.41
SKN1YGR143W MDM36Q06820 579 aa6.26□□□□□ -1.41
SKN1YGR143W ISA1Q07821 250 aaPredicted RBP6.26□□□□□ -1.41
SKN1YGR143W MED4Q12343 284 aa6.26□□□□□ -1.41
SKN1YGR143W RPS3P05750 240 aaKnown RBP6.25□□□□□ -1.41
SKN1YGR143W CLB3P24870 427 aa6.25□□□□□ -1.41
SKN1YGR143W DPB3P27344 201 aa6.25□□□□□ -1.41
SKN1YGR143W SSE1P32589 693 aaKnown RBP6.25□□□□□ -1.41
SKN1YGR143W SEG2P34250 1132 aa6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms