RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C VTI1Q04338 217 aa6.81□□□□□ -1.32
VPS61YDR136C SMD2Q06217 110 aaKnown RBP6.81□□□□□ -1.32
VPS61YDR136C ERF2Q06551 359 aa6.81□□□□□ -1.32
VPS61YDR136C YLR001CQ07895 862 aa6.81□□□□□ -1.32
VPS61YDR136C YPL225WQ08971 146 aaKnown RBP6.81□□□□□ -1.32
VPS61YDR136C WRS1Q12109 432 aaKnown RBP6.81□□□□□ -1.32
VPS61YDR136C MAK16P10962 306 aaPredicted RBP6.8□□□□□ -1.32
VPS61YDR136C SEC2P17065 759 aa6.8□□□□□ -1.32
VPS61YDR136C RPC53P25441 422 aa6.8□□□□□ -1.32
VPS61YDR136C RPL8BP29453 256 aaKnown RBP6.8□□□□□ -1.32
VPS61YDR136C GCG1P32656 232 aaKnown RBP6.8□□□□□ -1.32
VPS61YDR136C PET10P36139 283 aa6.8□□□□□ -1.32
VPS61YDR136C CIT3P43635 486 aa6.8□□□□□ -1.32
VPS61YDR136C JJJ2P46997 583 aa6.8□□□□□ -1.32
VPS61YDR136C CCM1P48237 864 aaPredicted RBP6.8□□□□□ -1.32
VPS61YDR136C BTN2P53286 410 aa6.8□□□□□ -1.32
VPS61YDR136C CWC22P53333 577 aaKnown RBP6.8□□□□□ -1.32
VPS61YDR136C DSE4P53753 1117 aa6.8□□□□□ -1.32
VPS61YDR136C NSG2P53898 299 aa6.8□□□□□ -1.32
VPS61YDR136C MDM1Q01846 1127 aa6.8□□□□□ -1.32
VPS61YDR136C STE23Q06010 1027 aa6.8□□□□□ -1.32
VPS61YDR136C SPO75Q07798 868 aa6.8□□□□□ -1.32
VPS61YDR136C RIX7Q07844 837 aaKnown RBP6.8□□□□□ -1.32
VPS61YDR136C YPL216WQ08964 1102 aa6.8□□□□□ -1.32
VPS61YDR136C SSB1P11484 613 aaKnown RBP6.79□□□□□ -1.32
VPS61YDR136C TUP1P16649 713 aa6.79□□□□□ -1.32
VPS61YDR136C APL1P27351 700 aa6.79□□□□□ -1.32
VPS61YDR136C SET5P38890 526 aaKnown RBP6.79□□□□□ -1.32
VPS61YDR136C YMR124WP39523 943 aaKnown RBP6.79□□□□□ -1.32
VPS61YDR136C PES4P39684 611 aa6.79□□□□□ -1.32
VPS61YDR136C SSB2P40150 613 aaKnown RBP6.79□□□□□ -1.32
VPS61YDR136C ATG32P40458 529 aa6.79□□□□□ -1.32
VPS61YDR136C TOS3P43637 560 aa6.79□□□□□ -1.32
VPS61YDR136C APL6P46682 809 aa6.79□□□□□ -1.32
VPS61YDR136C BNI5P53890 448 aaKnown RBP6.79□□□□□ -1.32
VPS61YDR136C TBF1Q02457 562 aa6.79□□□□□ -1.32
VPS61YDR136C TFB3Q03290 321 aa6.79□□□□□ -1.32
VPS61YDR136C ADY4Q05955 493 aa6.79□□□□□ -1.32
VPS61YDR136C NUC1P08466 329 aa6.78□□□□□ -1.32
VPS61YDR136C YEL076C-AP0CX16 216 aa6.78□□□□□ -1.32
VPS61YDR136C YLR464WP0CX17 216 aa6.78□□□□□ -1.32
VPS61YDR136C GFA1P14742 717 aaKnown RBP6.78□□□□□ -1.32
VPS61YDR136C ISY1P21374 235 aaPredicted RBP6.78□□□□□ -1.32
VPS61YDR136C SPT16P32558 1035 aaKnown RBP6.78□□□□□ -1.32
VPS61YDR136C YSW1P38280 609 aa6.78□□□□□ -1.32
VPS61YDR136C YEL076CP39971 216 aa6.78□□□□□ -1.32
VPS61YDR136C ROG3P43602 733 aa6.78□□□□□ -1.32
VPS61YDR136C SGM1P47166 707 aa6.78□□□□□ -1.32
VPS61YDR136C PUS6P53294 404 aa6.78□□□□□ -1.32
VPS61YDR136C CBK1P53894 756 aa6.78□□□□□ -1.32
VPS61YDR136C URH1Q04179 340 aa6.78□□□□□ -1.32
VPS61YDR136C YMR114CQ04471 368 aaKnown RBP6.78□□□□□ -1.32
VPS61YDR136C IRC3Q06683 689 aa6.78□□□□□ -1.32
VPS61YDR136C SIL1Q08199 421 aa6.78□□□□□ -1.32
VPS61YDR136C DAL7P21826 554 aa6.77□□□□□ -1.33
VPS61YDR136C CDC60P26637 1090 aaKnown RBP6.77□□□□□ -1.33
VPS61YDR136C YJU3P28321 313 aa6.77□□□□□ -1.33
VPS61YDR136C MRF1P30775 413 aaPredicted RBP6.77□□□□□ -1.33
VPS61YDR136C SEC8P32855 1065 aa6.77□□□□□ -1.33
VPS61YDR136C TOS1P38288 455 aa6.77□□□□□ -1.33
VPS61YDR136C BIM1P40013 344 aa6.77□□□□□ -1.33
VPS61YDR136C TRS85P46944 698 aa6.77□□□□□ -1.33
VPS61YDR136C TAD1P53065 400 aa6.77□□□□□ -1.33
VPS61YDR136C TUB4P53378 473 aa6.77□□□□□ -1.33
VPS61YDR136C TOF1P53840 1238 aa6.77□□□□□ -1.33
VPS61YDR136C FOL1P53848 824 aa6.77□□□□□ -1.33
VPS61YDR136C VPS30Q02948 557 aa6.77□□□□□ -1.33
VPS61YDR136C YPR078CQ06813 372 aa6.77□□□□□ -1.33
VPS61YDR136C MLH2Q07980 695 aa6.77□□□□□ -1.33
VPS61YDR136C TCO89Q08921 799 aa6.77□□□□□ -1.33
VPS61YDR136C KEL3Q08979 651 aaPredicted RBP6.77□□□□□ -1.33
VPS61YDR136C RIO1Q12196 484 aaKnown RBP6.77□□□□□ -1.33
VPS61YDR136C RAD59Q12223 238 aa6.77□□□□□ -1.33
VPS61YDR136C ARG82P07250 355 aa6.76□□□□□ -1.33
VPS61YDR136C TRM1P15565 570 aaKnown RBP6.76□□□□□ -1.33
VPS61YDR136C PRE10P21242 288 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
VPS61YDR136C SEC20P28791 383 aa6.76□□□□□ -1.33
VPS61YDR136C LAS1P36146 502 aaPredicted RBP6.76□□□□□ -1.33
VPS61YDR136C OLA1P38219 394 aaKnown RBP6.76□□□□□ -1.33
VPS61YDR136C SPP381P38282 291 aaPredicted RBP6.76□□□□□ -1.33
VPS61YDR136C RCK2P38623 610 aa6.76□□□□□ -1.33
VPS61YDR136C GAA1P39012 614 aa6.76□□□□□ -1.33
VPS61YDR136C XDJ1P39102 459 aa6.76□□□□□ -1.33
VPS61YDR136C UBP5P39944 805 aa6.76□□□□□ -1.33
VPS61YDR136C RRN7P40992 514 aa6.76□□□□□ -1.33
VPS61YDR136C EMP47P43555 445 aa6.76□□□□□ -1.33
VPS61YDR136C YJR039WP47107 1121 aa6.76□□□□□ -1.33
VPS61YDR136C ASE1P50275 885 aa6.76□□□□□ -1.33
VPS61YDR136C AGE1Q04412 482 aa6.76□□□□□ -1.33
VPS61YDR136C CSM3Q04659 317 aa6.76□□□□□ -1.33
VPS61YDR136C APL5Q08951 932 aaKnown RBP6.76□□□□□ -1.33
VPS61YDR136C RNA1P11745 407 aaKnown RBP6.75□□□□□ -1.33
VPS61YDR136C CAF20P12962 161 aaKnown RBP6.75□□□□□ -1.33
VPS61YDR136C PRP16P15938 1071 aaPredicted RBP6.75□□□□□ -1.33
VPS61YDR136C GSY1P23337 708 aa6.75□□□□□ -1.33
VPS61YDR136C CDC10P25342 322 aaKnown RBP6.75□□□□□ -1.33
VPS61YDR136C SRO9P25567 434 aaKnown RBP6.75□□□□□ -1.33
VPS61YDR136C XRS2P33301 854 aa6.75□□□□□ -1.33
VPS61YDR136C JNM1P36224 373 aa6.75□□□□□ -1.33
VPS61YDR136C SDS3P40505 327 aa6.75□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms