RNA–Protein interactions for RNA: ENST00000558535.1

IDH3A-206, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-206ENST00000558535 SGSM2O43147 1006 aa7.74□□□□□ -1.17
IDH3A-206ENST00000558535 HNRNPH2P55795 449 aaKnown RBP7.74□□□□□ -1.17
IDH3A-206ENST00000558535 ICA1Q05084 483 aa7.74□□□□□ -1.17
IDH3A-206ENST00000558535 EXOC6Q8TAG9 804 aa7.74□□□□□ -1.17
IDH3A-206ENST00000558535 UPF1Q92900 1129 aaKnown RBP eCLIP7.74□□□□□ -1.173e-6■■■■□ 26.2
IDH3A-206ENST00000558535 BORCS6Q96GS4 357 aa7.74□□□□□ -1.17
IDH3A-206ENST00000558535 PANK3Q9H999 370 aa7.74□□□□□ -1.17
IDH3A-206ENST00000558535 A1CFQ9NQ94 594 aaKnown RBP7.74□□□□□ -1.17
IDH3A-206ENST00000558535 BRD4O60885 1362 aaPredicted RBP7.74□□□□□ -1.17
IDH3A-206ENST00000558535 GPRASP1Q5JY77 1395 aa7.74□□□□□ -1.17
IDH3A-206ENST00000558535 FOXO3O43524 673 aa7.74□□□□□ -1.17
IDH3A-206ENST00000558535 CPP00450 1065 aa7.74□□□□□ -1.17
IDH3A-206ENST00000558535 IVLP07476 585 aa7.74□□□□□ -1.17
IDH3A-206ENST00000558535 KRT28Q7Z3Y7 464 aa7.74□□□□□ -1.17
IDH3A-206ENST00000558535 MYO1CO00159 1063 aa7.73□□□□□ -1.17
IDH3A-206ENST00000558535 HTATSF1O43719 755 aaKnown RBP7.73□□□□□ -1.17
IDH3A-206ENST00000558535 TPM4P67936 248 aa7.73□□□□□ -1.17
IDH3A-206ENST00000558535 BIRC2Q13490 618 aa7.73□□□□□ -1.17
IDH3A-206ENST00000558535 NOLC1Q14978 699 aaKnown RBP eCLIP7.73□□□□□ -1.17
IDH3A-206ENST00000558535 TTLL5Q6EMB2 1281 aa7.73□□□□□ -1.17
IDH3A-206ENST00000558535 MARF1Q9Y4F3 1742 aaKnown RBP7.73□□□□□ -1.17
IDH3A-206ENST00000558535 SLIT2O94813 1529 aa7.73□□□□□ -1.17
IDH3A-206ENST00000558535 ATP8B1O43520 1251 aa7.73□□□□□ -1.17
IDH3A-206ENST00000558535 ADAMTS2O95450 1211 aa7.73□□□□□ -1.17
IDH3A-206ENST00000558535 PEX19P40855 299 aa7.73□□□□□ -1.17
IDH3A-206ENST00000558535 ADCY2Q08462 1091 aa7.73□□□□□ -1.17
IDH3A-206ENST00000558535 HDGFL1Q5TGJ6 251 aa7.73□□□□□ -1.17
IDH3A-206ENST00000558535 EP400NLQ6ZTU2 488 aa7.73□□□□□ -1.17
IDH3A-206ENST00000558535 ARMCX6Q7L4S7 300 aa7.73□□□□□ -1.17
IDH3A-206ENST00000558535 NLRP13Q86W25 1043 aa7.73□□□□□ -1.17
IDH3A-206ENST00000558535 KIF18AQ8NI77 898 aa7.73□□□□□ -1.17
IDH3A-206ENST00000558535 DDX17Q92841 729 aaKnown RBP7.73□□□□□ -1.17
IDH3A-206ENST00000558535 UTP14AQ9BVJ6 771 aaKnown RBP7.73□□□□□ -1.17
IDH3A-206ENST00000558535 GZF1Q9H116 711 aaPredicted RBP7.73□□□□□ -1.17
IDH3A-206ENST00000558535 PSD3Q9NYI0 1048 aa7.73□□□□□ -1.17
IDH3A-206ENST00000558535 WASLO00401 505 aaPredicted RBP7.72□□□□□ -1.17
IDH3A-206ENST00000558535 U2AF2P26368 475 aaKnown RBP eCLIP7.72□□□□□ -1.17
IDH3A-206ENST00000558535 RWDD2BP57060 319 aa7.72□□□□□ -1.17
IDH3A-206ENST00000558535 UNC5CLQ8IV45 518 aa7.72□□□□□ -1.17
IDH3A-206ENST00000558535 SYAP1Q96A49 352 aaPredicted RBP7.72□□□□□ -1.17
IDH3A-206ENST00000558535 KIF1BPQ96EK5 621 aa7.72□□□□□ -1.17
IDH3A-206ENST00000558535 UBA5Q9GZZ9 404 aa7.72□□□□□ -1.17
IDH3A-206ENST00000558535 ETAA1Q9NY74 926 aa7.72□□□□□ -1.17
IDH3A-206ENST00000558535 USP19O94966 1318 aa7.72□□□□□ -1.17
IDH3A-206ENST00000558535 USP32Q8NFA0 1604 aa7.72□□□□□ -1.17
IDH3A-206ENST00000558535 ATP7BP35670 1465 aa7.72□□□□□ -1.17
IDH3A-206ENST00000558535 BCL9LQ86UU0 1499 aa7.72□□□□□ -1.17
IDH3A-206ENST00000558535 SPDYE4A6NLX3 237 aa7.72□□□□□ -1.17
IDH3A-206ENST00000558535 MAP9Q49MG5 647 aa7.72□□□□□ -1.17
IDH3A-206ENST00000558535 CCDC184Q52MB2 194 aa7.72□□□□□ -1.17
IDH3A-206ENST00000558535 MMS22LQ6ZRQ5 1243 aa7.72□□□□□ -1.17
IDH3A-206ENST00000558535 DDX46Q7L014 1031 aaKnown RBP7.72□□□□□ -1.17
IDH3A-206ENST00000558535 GAS2L3Q86XJ1 694 aa7.72□□□□□ -1.17
IDH3A-206ENST00000558535 FAM177A1Q8N128 213 aaPredicted RBP7.72□□□□□ -1.17
IDH3A-206ENST00000558535 ZNF397Q8NF99 534 aaPredicted RBP7.72□□□□□ -1.17
IDH3A-206ENST00000558535 TBC1D32Q96NH3 1257 aa7.72□□□□□ -1.17
IDH3A-206ENST00000558535 SH3GL3Q99963 347 aa7.72□□□□□ -1.17
IDH3A-206ENST00000558535 NWD2Q9ULI1 1742 aa7.71□□□□□ -1.17
IDH3A-206ENST00000558535 PES1O00541 588 aaKnown RBP7.71□□□□□ -1.17
IDH3A-206ENST00000558535 PPFIA2O75334 1257 aa7.71□□□□□ -1.17
IDH3A-206ENST00000558535 TPM1P09493 284 aa7.71□□□□□ -1.17
IDH3A-206ENST00000558535 BMS1Q14692 1282 aaKnown RBP7.71□□□□□ -1.17
IDH3A-206ENST00000558535 CDCA8Q53HL2 280 aa7.71□□□□□ -1.17
IDH3A-206ENST00000558535 AP1ARQ63HQ0 302 aa7.71□□□□□ -1.17
IDH3A-206ENST00000558535 GOLGA5Q8TBA6 731 aa7.71□□□□□ -1.17
IDH3A-206ENST00000558535 ABCF2Q9UG63 623 aa7.71□□□□□ -1.17
IDH3A-206ENST00000558535 EIF4G2P78344 907 aaKnown RBP eCLIP7.71□□□□□ -1.18
IDH3A-206ENST00000558535 TMED1Q13445 227 aa7.71□□□□□ -1.18
IDH3A-206ENST00000558535 FILIP1LQ4L180 1135 aa7.71□□□□□ -1.18
IDH3A-206ENST00000558535 WWC2Q6AWC2 1192 aa7.71□□□□□ -1.18
IDH3A-206ENST00000558535 EFCAB13Q8IY85 973 aa7.71□□□□□ -1.18
IDH3A-206ENST00000558535 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.71□□□□□ -1.18
IDH3A-206ENST00000558535 CCDC97Q96F63 343 aaPredicted RBP7.71□□□□□ -1.18
IDH3A-206ENST00000558535 GJD4Q96KN9 370 aaPredicted RBP7.71□□□□□ -1.18
IDH3A-206ENST00000558535 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.71□□□□□ -1.18
IDH3A-206ENST00000558535 SYNPO2Q9UMS6 1093 aa7.71□□□□□ -1.18
IDH3A-206ENST00000558535 BAG4O95429 457 aaKnown RBP7.7□□□□□ -1.18
IDH3A-206ENST00000558535 DDIT3P35638 169 aa7.7□□□□□ -1.18
IDH3A-206ENST00000558535 ZRSR1Q15695 479 aaKnown RBP7.7□□□□□ -1.18
IDH3A-206ENST00000558535 VPS72Q15906 364 aa7.7□□□□□ -1.18
IDH3A-206ENST00000558535 C1QTNF12Q5T7M4 302 aa7.7□□□□□ -1.18
IDH3A-206ENST00000558535 SNX21Q969T3 373 aa7.7□□□□□ -1.18
IDH3A-206ENST00000558535 RANBP17Q9H2T7 1088 aaKnown RBP7.7□□□□□ -1.18
IDH3A-206ENST00000558535 IL16Q14005 1332 aa7.7□□□□□ -1.18
IDH3A-206ENST00000558535 SYNRGQ9UMZ2 1314 aa7.7□□□□□ -1.18
IDH3A-206ENST00000558535 PLEKHG2Q9H7P9 1386 aa7.7□□□□□ -1.18
IDH3A-206ENST00000558535 ITSN1Q15811 1721 aa7.7□□□□□ -1.18
IDH3A-206ENST00000558535 PAX7P23759 505 aa7.7□□□□□ -1.18
IDH3A-206ENST00000558535 SRLQ86TD4 932 aa7.7□□□□□ -1.18
IDH3A-206ENST00000558535 SMC5Q8IY18 1101 aa7.7□□□□□ -1.18
IDH3A-206ENST00000558535 MPNDQ8N594 471 aa7.7□□□□□ -1.18
IDH3A-206ENST00000558535 TBC1D2Q9BYX2 928 aa7.7□□□□□ -1.18
IDH3A-206ENST00000558535 RPS6KL1Q9Y6S9 549 aa7.7□□□□□ -1.18
IDH3A-206ENST00000558535 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.69□□□□□ -1.18
IDH3A-206ENST00000558535 ABCD1P33897 745 aa7.69□□□□□ -1.18
IDH3A-206ENST00000558535 RAB3GAP1Q15042 981 aa7.69□□□□□ -1.18
IDH3A-206ENST00000558535 TNPO1Q92973 898 aaKnown RBP7.69□□□□□ -1.18
IDH3A-206ENST00000558535 KDM4CQ9H3R0 1056 aa7.69□□□□□ -1.18
IDH3A-206ENST00000558535 ATG3Q9NT62 314 aa7.69□□□□□ -1.18
IDH3A-206ENST00000558535 TRAK1Q9UPV9 953 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms