RNA–Protein interactions for RNA: YPR036W

VMA13, Transcript of Subunit H of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA13, Length 1,437 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA13	YPR036W	PGA3	Q12746	312 aa	Known RBP	6.08	□□□□□ -1.44
VMA13	YPR036W	ADR1	P07248	1323 aa		6.08	□□□□□ -1.44
VMA13	YPR036W	PIF1	P07271	859 aa		6.08	□□□□□ -1.44
VMA13	YPR036W	BIK1	P11709	440 aa		6.08	□□□□□ -1.44
VMA13	YPR036W	SSH4	P32343	579 aa		6.08	□□□□□ -1.44
VMA13	YPR036W	YKL222C	P35995	705 aa		6.08	□□□□□ -1.44
VMA13	YPR036W	RRN3	P36070	627 aa		6.08	□□□□□ -1.44
VMA13	YPR036W	TOS1	P38288	455 aa		6.08	□□□□□ -1.44
VMA13	YPR036W	TAT2	P38967	592 aa		6.08	□□□□□ -1.44
VMA13	YPR036W	HAL5	P38970	855 aa	Known RBP	6.08	□□□□□ -1.44
VMA13	YPR036W	NIS1	P53939	407 aa		6.08	□□□□□ -1.44
VMA13	YPR036W	PNP1	Q05788	311 aa		6.08	□□□□□ -1.44
VMA13	YPR036W	CTI6	Q08923	506 aa		6.08	□□□□□ -1.44
VMA13	YPR036W	GFD2	P25370	566 aa	Known RBP	6.07	□□□□□ -1.44
VMA13	YPR036W	PEP7	P32609	515 aa		6.07	□□□□□ -1.44
VMA13	YPR036W	MNR2	P35724	969 aa		6.07	□□□□□ -1.44
VMA13	YPR036W	CIC1	P38779	376 aa	Known RBP	6.07	□□□□□ -1.44
VMA13	YPR036W	APE4	P38821	490 aa		6.07	□□□□□ -1.44
VMA13	YPR036W	BOL3	P39724	118 aa		6.07	□□□□□ -1.44
VMA13	YPR036W	DOT6	P40059	670 aa	Known RBP	6.07	□□□□□ -1.44
VMA13	YPR036W	QDR1	P40475	563 aa		6.07	□□□□□ -1.44
VMA13	YPR036W	HST1	P53685	503 aa		6.07	□□□□□ -1.44
VMA13	YPR036W	CAF120	P53836	1060 aa		6.07	□□□□□ -1.44
VMA13	YPR036W	NAF1	P53919	492 aa	Known RBP	6.07	□□□□□ -1.44
VMA13	YPR036W	YVH1	Q02256	364 aa	Known RBP	6.07	□□□□□ -1.44
VMA13	YPR036W	RCF1	Q03713	159 aa		6.07	□□□□□ -1.44
VMA13	YPR036W	SPC19	Q03954	165 aa		6.07	□□□□□ -1.44
VMA13	YPR036W	HEL2	Q05580	639 aa	Known RBP	6.07	□□□□□ -1.44
VMA13	YPR036W	YLR352W	Q06479	807 aa		6.07	□□□□□ -1.44
VMA13	YPR036W	IRC3	Q06683	689 aa		6.07	□□□□□ -1.44
VMA13	YPR036W	TMA17	Q12513	150 aa		6.07	□□□□□ -1.44
VMA13	YPR036W	SRF1	Q12516	437 aa		6.07	□□□□□ -1.44
VMA13	YPR036W	LAM4	P38800	1345 aa		6.06	□□□□□ -1.44
VMA13	YPR036W	FUR4	P05316	633 aa	Known RBP	6.06	□□□□□ -1.44
VMA13	YPR036W	RPL19A	P0CX82	189 aa	Known RBP	6.06	□□□□□ -1.44
VMA13	YPR036W	RPL19B	P0CX83	189 aa	Predicted RBP	6.06	□□□□□ -1.44
VMA13	YPR036W	ESS1	P22696	170 aa		6.06	□□□□□ -1.44
VMA13	YPR036W	NGR1	P32831	672 aa	Known RBP	6.06	□□□□□ -1.44
VMA13	YPR036W	UBX4	P54730	416 aa		6.06	□□□□□ -1.44
VMA13	YPR036W	SND1	Q04007	877 aa		6.06	□□□□□ -1.44
VMA13	YPR036W	TSR2	Q06672	205 aa	Known RBP	6.06	□□□□□ -1.44
VMA13	YPR036W	CFT2	Q12102	859 aa	Predicted RBP	6.06	□□□□□ -1.44
VMA13	YPR036W	CIT1	P00890	479 aa		6.05	□□□□□ -1.44
VMA13	YPR036W	PGI1	P12709	554 aa	Known RBP	6.05	□□□□□ -1.44
VMA13	YPR036W	MSM1	P22438	575 aa		6.05	□□□□□ -1.44
VMA13	YPR036W	MBR1	P23493	339 aa		6.05	□□□□□ -1.44
VMA13	YPR036W	PEX6	P33760	1030 aa		6.05	□□□□□ -1.44
VMA13	YPR036W	OSH3	P38713	996 aa	Known RBP	6.05	□□□□□ -1.44
VMA13	YPR036W	YMR147W	P40218	223 aa	Known RBP	6.05	□□□□□ -1.44
VMA13	YPR036W	NIT1	P40447	199 aa		6.05	□□□□□ -1.44
VMA13	YPR036W	SPO22	P40511	975 aa		6.05	□□□□□ -1.44
VMA13	YPR036W	VID28	P40547	921 aa		6.05	□□□□□ -1.44
VMA13	YPR036W	CTF18	P49956	741 aa		6.05	□□□□□ -1.44
VMA13	YPR036W	TUB4	P53378	473 aa		6.05	□□□□□ -1.44
VMA13	YPR036W	YNL058C	P53947	316 aa		6.05	□□□□□ -1.44
VMA13	YPR036W	COG8	Q04632	607 aa		6.05	□□□□□ -1.44
VMA13	YPR036W	BUG1	Q12191	341 aa		6.05	□□□□□ -1.44
VMA13	YPR036W	CEX1	Q12453	761 aa		6.05	□□□□□ -1.44
VMA13	YPR036W	CDC31	P06704	161 aa	Known RBP	6.04	□□□□□ -1.44
VMA13	YPR036W	HOM3	P10869	527 aa		6.04	□□□□□ -1.44
VMA13	YPR036W	RDS2	P19541	446 aa	Known RBP	6.04	□□□□□ -1.44
VMA13	YPR036W	KRR1	P25586	316 aa	Predicted RBP	6.04	□□□□□ -1.44
VMA13	YPR036W	MSH2	P25847	964 aa		6.04	□□□□□ -1.44
VMA13	YPR036W	MRS6	P32864	603 aa	Known RBP	6.04	□□□□□ -1.44
VMA13	YPR036W	STE5	P32917	917 aa		6.04	□□□□□ -1.44
VMA13	YPR036W	RPT1	P33299	467 aa	Known RBP	6.04	□□□□□ -1.44
VMA13	YPR036W	ABZ1	P37254	787 aa	Predicted RBP	6.04	□□□□□ -1.44
VMA13	YPR036W	ERT1	P38140	529 aa		6.04	□□□□□ -1.44
VMA13	YPR036W	NDE1	P40215	560 aa		6.04	□□□□□ -1.44
VMA13	YPR036W	HYR1	P40581	163 aa	Known RBP	6.04	□□□□□ -1.44
VMA13	YPR036W	ENT3	P47160	408 aa		6.04	□□□□□ -1.44
VMA13	YPR036W	KRE33	P53914	1056 aa	Known RBP	6.04	□□□□□ -1.44
VMA13	YPR036W	RAT1	Q02792	1006 aa	Known RBP	6.04	□□□□□ -1.44
VMA13	YPR036W	RRP9	Q06506	573 aa	Known RBP	6.04	□□□□□ -1.44
VMA13	YPR036W	THI3	Q07471	609 aa		6.04	□□□□□ -1.44
VMA13	YPR036W	APC11	Q12157	165 aa		6.04	□□□□□ -1.44
VMA13	YPR036W	CLF1	Q12309	687 aa	Predicted RBP	6.04	□□□□□ -1.44
VMA13	YPR036W	SIT4	P20604	311 aa		6.03	□□□□□ -1.44
VMA13	YPR036W	MGM1	P32266	881 aa		6.03	□□□□□ -1.44
VMA13	YPR036W	PET112	P33893	541 aa		6.03	□□□□□ -1.44
VMA13	YPR036W	PEX5	P35056	612 aa		6.03	□□□□□ -1.44
VMA13	YPR036W	YHR218W	P38899	603 aa		6.03	□□□□□ -1.44
VMA13	YPR036W	CAJ1	P39101	391 aa		6.03	□□□□□ -1.44
VMA13	YPR036W	RVS167	P39743	482 aa	Known RBP	6.03	□□□□□ -1.44
VMA13	YPR036W	RSC1	P53236	928 aa		6.03	□□□□□ -1.44
VMA13	YPR036W	VTI1	Q04338	217 aa		6.03	□□□□□ -1.44
VMA13	YPR036W	RIX7	Q07844	837 aa	Known RBP	6.03	□□□□□ -1.44
VMA13	YPR036W	SGT2	Q12118	346 aa	Known RBP	6.03	□□□□□ -1.44
VMA13	YPR036W	REC8	Q12188	680 aa		6.03	□□□□□ -1.44
VMA13	YPR036W	CPA2	P03965	1118 aa	Known RBP	6.02	□□□□□ -1.45
VMA13	YPR036W	CAF20	P12962	161 aa	Known RBP	6.02	□□□□□ -1.45
VMA13	YPR036W	URA1	P28272	314 aa	Predicted RBP	6.02	□□□□□ -1.45
VMA13	YPR036W	IMP2'	P32351	346 aa		6.02	□□□□□ -1.45
VMA13	YPR036W	SFP1	P32432	683 aa		6.02	□□□□□ -1.45
VMA13	YPR036W	VPH1	P32563	840 aa	Known RBP	6.02	□□□□□ -1.45
VMA13	YPR036W	PTH2	P34222	208 aa		6.02	□□□□□ -1.45
VMA13	YPR036W	PRX1	P34227	261 aa	Known RBP	6.02	□□□□□ -1.45
VMA13	YPR036W	RXT2	P38255	430 aa		6.02	□□□□□ -1.45
VMA13	YPR036W	ICP55	P40051	511 aa		6.02	□□□□□ -1.45
VMA13	YPR036W	GPP1	P41277	250 aa	Known RBP	6.02	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms