RNA–Protein interactions for RNA: YPL119C

DBP1, Transcript of Putative ATP-dependent RNA helicase of the DEAD-box protein family, yeast

Gene DBP1, Length 1,854 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP1	YPL119C	ROG3	P43602	733 aa		10.47	□□□□□ -0.73
DBP1	YPL119C	OYE2	Q03558	400 aa	Known RBP	10.47	□□□□□ -0.73
DBP1	YPL119C	THS1	P04801	734 aa	Known RBP	10.46	□□□□□ -0.74
DBP1	YPL119C	PHO88	P38264	188 aa	Predicted RBP	10.46	□□□□□ -0.74
DBP1	YPL119C	VHR2	P40041	505 aa		10.46	□□□□□ -0.74
DBP1	YPL119C	BRE2	P43132	505 aa		10.46	□□□□□ -0.74
DBP1	YPL119C	YFL034W	P43564	1073 aa		10.46	□□□□□ -0.74
DBP1	YPL119C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	10.45	□□□□□ -0.74	not detected
DBP1	YPL119C	RAD18	P10862	487 aa		10.45	□□□□□ -0.74
DBP1	YPL119C	SUP45	P12385	437 aa	Known RBP	10.45	□□□□□ -0.74
DBP1	YPL119C	HUL4	P40985	892 aa		10.45	□□□□□ -0.74
DBP1	YPL119C	IES1	P43579	692 aa		10.45	□□□□□ -0.74
DBP1	YPL119C	YML037C	Q03703	340 aa		10.45	□□□□□ -0.74
DBP1	YPL119C	RBA50	Q04418	439 aa		10.45	□□□□□ -0.74
DBP1	YPL119C	YDL057W	Q07379	328 aa		10.45	□□□□□ -0.74
DBP1	YPL119C	PPR1	P07272	904 aa	Predicted RBP	10.44	□□□□□ -0.74
DBP1	YPL119C	SEC23	P15303	768 aa	Known RBP	10.44	□□□□□ -0.74
DBP1	YPL119C	DAL7	P21826	554 aa		10.44	□□□□□ -0.74
DBP1	YPL119C	UGA4	P32837	571 aa		10.44	□□□□□ -0.74
DBP1	YPL119C	XRS2	P33301	854 aa		10.44	□□□□□ -0.74
DBP1	YPL119C	CCC2	P38995	1004 aa		10.44	□□□□□ -0.74
DBP1	YPL119C	NUP82	P40368	713 aa		10.44	□□□□□ -0.74
DBP1	YPL119C	RRB1	Q04225	511 aa	Known RBP	10.44	□□□□□ -0.74
DBP1	YPL119C	GAL2	P13181	574 aa		10.44	□□□□□ -0.74
DBP1	YPL119C	TRK2	P28584	889 aa		10.44	□□□□□ -0.74
DBP1	YPL119C	NBP1	P52919	319 aa	Predicted RBP	10.44	□□□□□ -0.74
DBP1	YPL119C	LIF1	P53150	421 aa		10.44	□□□□□ -0.74
DBP1	YPL119C	SML1	Q04964	104 aa		10.44	□□□□□ -0.74
DBP1	YPL119C	SUB2	Q07478	446 aa	Known RBP	10.44	□□□□□ -0.74
DBP1	YPL119C	YLR001C	Q07895	862 aa		10.44	□□□□□ -0.74
DBP1	YPL119C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	10.43	□□□□□ -0.74	not detected
DBP1	YPL119C	TOM70	P07213	617 aa	Known RBP	10.43	□□□□□ -0.74
DBP1	YPL119C	SAM1	P10659	382 aa	Known RBP	10.43	□□□□□ -0.74
DBP1	YPL119C	CDC60	P26637	1090 aa	Known RBP	10.43	□□□□□ -0.74
DBP1	YPL119C	MCX1	P38323	520 aa	Predicted RBP	10.43	□□□□□ -0.74
DBP1	YPL119C	FUS2	Q05670	677 aa		10.43	□□□□□ -0.74
DBP1	YPL119C	VAC14	Q06708	880 aa		10.43	□□□□□ -0.74
DBP1	YPL119C	CSR2	Q12734	1121 aa		10.43	□□□□□ -0.74
DBP1	YPL119C	FBP1	P09201	348 aa		10.42	□□□□□ -0.74
DBP1	YPL119C	MAK16	P10962	306 aa	Predicted RBP	10.42	□□□□□ -0.74
DBP1	YPL119C	SSB1	P11484	613 aa	Known RBP	10.42	□□□□□ -0.74
DBP1	YPL119C	PGM1	P33401	570 aa	Known RBP	10.42	□□□□□ -0.74
DBP1	YPL119C	SSB2	P40150	613 aa	Known RBP	10.42	□□□□□ -0.74
DBP1	YPL119C	EFM4	P40516	257 aa		10.42	□□□□□ -0.74
DBP1	YPL119C	BOP3	P53958	396 aa		10.42	□□□□□ -0.74
DBP1	YPL119C	TMA64	Q04600	565 aa	Known RBP	10.42	□□□□□ -0.74
DBP1	YPL119C	NEW1	Q08972	1196 aa	Known RBP	10.42	□□□□□ -0.74
DBP1	YPL119C	PLP2	Q12017	286 aa		10.42	□□□□□ -0.74
DBP1	YPL119C	CLN3	P13365	580 aa		10.42	□□□□□ -0.74
DBP1	YPL119C	ESS1	P22696	170 aa		10.42	□□□□□ -0.74
DBP1	YPL119C	RAD57	P25301	460 aa		10.42	□□□□□ -0.74
DBP1	YPL119C	RTG2	P32608	588 aa	Known RBP	10.42	□□□□□ -0.74
DBP1	YPL119C	SMC2	P38989	1170 aa	Known RBP	10.42	□□□□□ -0.74
DBP1	YPL119C	UBP5	P39944	805 aa		10.42	□□□□□ -0.74
DBP1	YPL119C	TOF1	P53840	1238 aa		10.42	□□□□□ -0.74
DBP1	YPL119C	SEC5	P89102	971 aa		10.42	□□□□□ -0.74
DBP1	YPL119C	PEX29	Q03370	554 aa		10.42	□□□□□ -0.74
DBP1	YPL119C	WHI4	Q07655	649 aa	Known RBP	10.42	□□□□□ -0.74
DBP1	YPL119C	TCO89	Q08921	799 aa		10.42	□□□□□ -0.74
DBP1	YPL119C	APL1	P27351	700 aa		10.41	□□□□□ -0.74
DBP1	YPL119C	MRF1	P30775	413 aa	Predicted RBP	10.41	□□□□□ -0.74
DBP1	YPL119C	SMC1	P32908	1225 aa		10.41	□□□□□ -0.74
DBP1	YPL119C	NIP100	P33420	868 aa		10.41	□□□□□ -0.74
DBP1	YPL119C	NOP14	Q99207	810 aa	Known RBP	10.41	□□□□□ -0.74
DBP1	YPL119C	SRD1	P09007	221 aa		10.4	□□□□□ -0.74
DBP1	YPL119C	TUP1	P16649	713 aa		10.4	□□□□□ -0.74
DBP1	YPL119C	STE11	P23561	717 aa		10.4	□□□□□ -0.74
DBP1	YPL119C	DPB3	P27344	201 aa		10.4	□□□□□ -0.74
DBP1	YPL119C	UBP11	P36026	717 aa		10.4	□□□□□ -0.74
DBP1	YPL119C	RPN3	P40016	523 aa	Known RBP	10.4	□□□□□ -0.74
DBP1	YPL119C	CCM1	P48237	864 aa	Predicted RBP	10.4	□□□□□ -0.74
DBP1	YPL119C	SOV1	Q04748	898 aa		10.4	□□□□□ -0.74
DBP1	YPL119C	YLR278C	Q05854	1341 aa		10.4	□□□□□ -0.74
DBP1	YPL119C	OPY2	Q06810	360 aa		10.4	□□□□□ -0.74
DBP1	YPL119C	MED1	Q12321	566 aa		10.4	□□□□□ -0.74
DBP1	YPL119C	SRB4	P32569	687 aa		10.4	□□□□□ -0.75
DBP1	YPL119C	YJL007C	P47080	104 aa		10.4	□□□□□ -0.75
DBP1	YPL119C	CTR1	P49573	406 aa		10.4	□□□□□ -0.75
DBP1	YPL119C	TAD1	P53065	400 aa		10.4	□□□□□ -0.75
DBP1	YPL119C	CNM67	P53865	581 aa	Known RBP	10.4	□□□□□ -0.75
DBP1	YPL119C	GIR2	Q03768	265 aa	Predicted RBP	10.4	□□□□□ -0.75
DBP1	YPL119C	YLR326W	Q06170	240 aa	Known RBP	10.4	□□□□□ -0.75
DBP1	YPL119C	YPL277C	Q08989	487 aa		10.4	□□□□□ -0.75
DBP1	YPL119C	GIN4	Q12263	1142 aa		10.4	□□□□□ -0.75
DBP1	YPL119C	SHP1	P34223	423 aa		10.39	□□□□□ -0.75
DBP1	YPL119C	YEL1	P34225	687 aa		10.39	□□□□□ -0.75
DBP1	YPL119C	PGM2	P37012	569 aa	Known RBP	10.39	□□□□□ -0.75
DBP1	YPL119C	GPD2	P41911	440 aa	Known RBP	10.39	□□□□□ -0.75
DBP1	YPL119C	YGL039W	P53183	348 aa	Known RBP	10.39	□□□□□ -0.75
DBP1	YPL119C	ALD6	P54115	500 aa	Known RBP	10.39	□□□□□ -0.75
DBP1	YPL119C	SVF1	Q05515	481 aa		10.39	□□□□□ -0.75
DBP1	YPL119C	TGL1	P34163	548 aa		10.38	□□□□□ -0.75
DBP1	YPL119C	JNM1	P36224	373 aa		10.38	□□□□□ -0.75
DBP1	YPL119C	SMF1	P38925	575 aa		10.38	□□□□□ -0.75
DBP1	YPL119C	YMR124W	P39523	943 aa	Known RBP	10.38	□□□□□ -0.75
DBP1	YPL119C	SUV3	P32580	737 aa		10.38	□□□□□ -0.75
DBP1	YPL119C	YKL023W	P36103	277 aa	Known RBP	10.38	□□□□□ -0.75
DBP1	YPL119C	DUS3	Q06053	668 aa	Known RBP	10.38	□□□□□ -0.75
DBP1	YPL119C	YPR078C	Q06813	372 aa		10.38	□□□□□ -0.75
DBP1	YPL119C	CRD1	Q07560	283 aa		10.38	□□□□□ -0.75

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms