RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W PRE10P21242 288 aaKnown RBP RIP-Chip data16.05■□□□□ 0.16not detected
SHR5YOL110W ISY1P21374 235 aaPredicted RBP16.05■□□□□ 0.16
SHR5YOL110W DBP7P36120 742 aaKnown RBP16.05■□□□□ 0.16
SHR5YOL110W RRD1P40454 393 aaKnown RBP16.05■□□□□ 0.16
SHR5YOL110W FYV10P40492 516 aa16.05■□□□□ 0.16
SHR5YOL110W TLG2Q08144 397 aa16.05■□□□□ 0.16
SHR5YOL110W NCS6P53088 359 aa16.04■□□□□ 0.16
SHR5YOL110W GUP1P53154 560 aa16.04■□□□□ 0.16
SHR5YOL110W YMR321CQ04898 105 aa16.04■□□□□ 0.16
SHR5YOL110W YPR148CQ06523 435 aa16.04■□□□□ 0.16
SHR5YOL110W PFK1P16861 987 aaKnown RBP16.03■□□□□ 0.16
SHR5YOL110W PRP22P24384 1145 aaKnown RBP16.03■□□□□ 0.16
SHR5YOL110W MRPL10P36520 322 aa16.03■□□□□ 0.16
SHR5YOL110W FIS1P40515 155 aa16.03■□□□□ 0.16
SHR5YOL110W AFT2Q08957 416 aa16.03■□□□□ 0.16
SHR5YOL110W TRM11Q12463 433 aa16.03■□□□□ 0.16
SHR5YOL110W YUR1P26725 428 aa16.02■□□□□ 0.16
SHR5YOL110W TVP38P36164 337 aa16.02■□□□□ 0.16
SHR5YOL110W RPN3P40016 523 aaKnown RBP16.02■□□□□ 0.16
SHR5YOL110W HCR1Q05775 265 aaKnown RBP16.02■□□□□ 0.16
SHR5YOL110W YDR461C-AQ2V2P7 80 aa16.02■□□□□ 0.16
SHR5YOL110W PPS1P38148 807 aa16.01■□□□□ 0.15
SHR5YOL110W ULP2P40537 1034 aaPredicted RBP16.01■□□□□ 0.15
SHR5YOL110W SSL2Q00578 843 aa16.01■□□□□ 0.15
SHR5YOL110W GFD1Q04839 188 aaKnown RBP16.01■□□□□ 0.15
SHR5YOL110W CDC48P25694 835 aaKnown RBP16■□□□□ 0.15
SHR5YOL110W SEC5P89102 971 aa16■□□□□ 0.15
SHR5YOL110W ICL2Q12031 575 aa16■□□□□ 0.15
SHR5YOL110W YLL058WQ12198 575 aa16■□□□□ 0.15
SHR5YOL110W TCP1P12612 559 aaKnown RBP15.99■□□□□ 0.15
SHR5YOL110W ADE17P38009 592 aaKnown RBP15.99■□□□□ 0.15
SHR5YOL110W SPP382Q06411 708 aaPredicted RBP15.99■□□□□ 0.15
SHR5YOL110W ECM29P38737 1868 aa15.99■□□□□ 0.15
SHR5YOL110W TIM23P32897 222 aa15.98■□□□□ 0.15
SHR5YOL110W BCD1P38772 366 aa15.98■□□□□ 0.15
SHR5YOL110W PSF2P40359 213 aa15.98■□□□□ 0.15
SHR5YOL110W RPS7BP48164 190 aaKnown RBP15.98■□□□□ 0.15
SHR5YOL110W MIC60P36112 540 aa15.97■□□□□ 0.15
SHR5YOL110W YEL025CP39991 1188 aa15.97■□□□□ 0.15
SHR5YOL110W MDR1P53258 950 aa15.97■□□□□ 0.15
SHR5YOL110W NCS2P53923 493 aaPredicted RBP15.97■□□□□ 0.15
SHR5YOL110W GPI13Q07830 1017 aa15.97■□□□□ 0.15
SHR5YOL110W OM45P16547 393 aa15.96■□□□□ 0.15
SHR5YOL110W YKL091CP33324 310 aaKnown RBP15.96■□□□□ 0.15
SHR5YOL110W TFG2P41896 400 aaPredicted RBP15.96■□□□□ 0.15
SHR5YOL110W LSC2P53312 427 aa15.96■□□□□ 0.15
SHR5YOL110W SMC5Q08204 1093 aa15.96■□□□□ 0.15
SHR5YOL110W TFC8Q12308 588 aa15.96■□□□□ 0.15
SHR5YOL110W POX1P13711 748 aa15.95■□□□□ 0.14
SHR5YOL110W ATG19P35193 415 aa15.95■□□□□ 0.14
SHR5YOL110W YFL034WP43564 1073 aa15.95■□□□□ 0.14
SHR5YOL110W YGR237CP50089 785 aa15.95■□□□□ 0.14
SHR5YOL110W CDC37P06101 506 aaKnown RBP15.94■□□□□ 0.14
SHR5YOL110W PSO2P30620 661 aa15.94■□□□□ 0.14
SHR5YOL110W SCS3P53012 380 aa15.94■□□□□ 0.14
SHR5YOL110W WAR1Q03631 944 aa15.94■□□□□ 0.14
SHR5YOL110W YDL057WQ07379 328 aa15.94■□□□□ 0.14
SHR5YOL110W YPL216WQ08964 1102 aa15.94■□□□□ 0.14
SHR5YOL110W PDC1P06169 563 aaKnown RBP15.93■□□□□ 0.14
SHR5YOL110W DBP5P20449 482 aaKnown RBP15.93■□□□□ 0.14
SHR5YOL110W GPT2P36148 743 aa15.93■□□□□ 0.14
SHR5YOL110W PSY4P38193 441 aa15.93■□□□□ 0.14
SHR5YOL110W TOF1P53840 1238 aa15.93■□□□□ 0.14
SHR5YOL110W PCK1P10963 549 aa15.92■□□□□ 0.14
SHR5YOL110W RPC53P25441 422 aa15.92■□□□□ 0.14
SHR5YOL110W BIM1P40013 344 aa15.92■□□□□ 0.14
SHR5YOL110W YPL277CQ08989 487 aa15.92■□□□□ 0.14
SHR5YOL110W MAS2P11914 482 aa15.91■□□□□ 0.14
SHR5YOL110W MRC1P25588 1096 aa15.91■□□□□ 0.14
SHR5YOL110W PGM2P37012 569 aaKnown RBP15.91■□□□□ 0.14
SHR5YOL110W FLR1P38124 548 aa15.91■□□□□ 0.14
SHR5YOL110W UBP13P38187 747 aa15.91■□□□□ 0.14
SHR5YOL110W HUL4P40985 892 aa15.91■□□□□ 0.14
SHR5YOL110W TOS3P43637 560 aa15.91■□□□□ 0.14
SHR5YOL110W AIP1P46680 615 aaKnown RBP15.91■□□□□ 0.14
SHR5YOL110W YJR107WP47145 328 aa15.91■□□□□ 0.14
SHR5YOL110W PSP2P50109 593 aaKnown RBP15.91■□□□□ 0.14
SHR5YOL110W BRE5P53741 515 aaKnown RBP15.91■□□□□ 0.14
SHR5YOL110W EBS1Q03466 884 aaKnown RBP15.91■□□□□ 0.14
SHR5YOL110W NOC3Q07896 663 aaPredicted RBP15.91■□□□□ 0.14
SHR5YOL110W TMA16Q08687 178 aa15.91■□□□□ 0.14
SHR5YOL110W NCR1Q12200 1170 aa15.91■□□□□ 0.14
SHR5YOL110W NBP1P52919 319 aaPredicted RBP15.9■□□□□ 0.14
SHR5YOL110W ARK1P53974 638 aa15.9■□□□□ 0.14
SHR5YOL110W CUR1Q06469 252 aa15.9■□□□□ 0.14
SHR5YOL110W YOL075CQ08234 1294 aa15.9■□□□□ 0.14
SHR5YOL110W TCO89Q08921 799 aa15.9■□□□□ 0.14
SHR5YOL110W YOR131CQ12486 218 aa15.9■□□□□ 0.14
SHR5YOL110W DED1P06634 604 aaKnown RBP15.89■□□□□ 0.13
SHR5YOL110W DBP1P24784 617 aaKnown RBP15.89■□□□□ 0.13
SHR5YOL110W MRF1P30775 413 aaPredicted RBP15.89■□□□□ 0.13
SHR5YOL110W IRE1P32361 1115 aa15.89■□□□□ 0.13
SHR5YOL110W VPS35P34110 944 aa15.89■□□□□ 0.13
SHR5YOL110W VID30P53076 958 aa15.89■□□□□ 0.13
SHR5YOL110W ROD1Q02805 837 aa15.89■□□□□ 0.13
SHR5YOL110W MAK16P10962 306 aaPredicted RBP15.88■□□□□ 0.13
SHR5YOL110W DAL7P21826 554 aa15.88■□□□□ 0.13
SHR5YOL110W RME1P32338 300 aaKnown RBP15.88■□□□□ 0.13
SHR5YOL110W YSC83P32792 385 aa15.88■□□□□ 0.13
SHR5YOL110W EAF5P39995 279 aa15.88■□□□□ 0.13
Retrieved 100 of 5,963 RNA–protein pairs in 124.6 ms