RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeast

Gene PXR1, Length 816 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXR1	YGR280C	PEX1	P24004	1043 aa		5.22	□□□□□ -1.57
PXR1	YGR280C	CHS3	P29465	1165 aa		5.22	□□□□□ -1.57
PXR1	YGR280C	FPR3	P38911	411 aa	Known RBP	5.22	□□□□□ -1.57
PXR1	YGR280C	YIR016W	P40572	265 aa		5.22	□□□□□ -1.57
PXR1	YGR280C	YFL052W	P43551	465 aa		5.22	□□□□□ -1.57
PXR1	YGR280C	NUP42	P49686	430 aa	Known RBP	5.22	□□□□□ -1.57
PXR1	YGR280C	NIS1	P53939	407 aa		5.22	□□□□□ -1.57
PXR1	YGR280C	RTT109	Q07794	436 aa		5.22	□□□□□ -1.57
PXR1	YGR280C	NSE1	Q07913	336 aa		5.22	□□□□□ -1.57
PXR1	YGR280C	CDC48	P25694	835 aa	Known RBP	5.21	□□□□□ -1.58
PXR1	YGR280C	CLB5	P30283	435 aa		5.21	□□□□□ -1.58
PXR1	YGR280C	RAD24	P32641	659 aa		5.21	□□□□□ -1.58
PXR1	YGR280C	RFS1	P38234	210 aa	Known RBP	5.21	□□□□□ -1.58
PXR1	YGR280C	RPN7	Q06103	429 aa	Known RBP	5.21	□□□□□ -1.58
PXR1	YGR280C	BUD20	Q08004	166 aa	Predicted RBP	5.21	□□□□□ -1.58
PXR1	YGR280C	PCK1	P10963	549 aa		5.2	□□□□□ -1.58
PXR1	YGR280C	SEC21	P32074	935 aa	Known RBP	5.2	□□□□□ -1.58
PXR1	YGR280C	PSE1	P32337	1089 aa	Known RBP	5.2	□□□□□ -1.58
PXR1	YGR280C	ECM32	P32644	1121 aa	Known RBP	5.2	□□□□□ -1.58
PXR1	YGR280C	MAF1	P41910	395 aa		5.2	□□□□□ -1.58
PXR1	YGR280C	TY1B-A	O13527	1196 aa	Known RBP	5.19	□□□□□ -1.58
PXR1	YGR280C	ACE2	P21192	770 aa		5.19	□□□□□ -1.58
PXR1	YGR280C	MSH2	P25847	964 aa		5.19	□□□□□ -1.58
PXR1	YGR280C	MSS51	P32335	436 aa		5.19	□□□□□ -1.58
PXR1	YGR280C	DID4	P36108	232 aa		5.19	□□□□□ -1.58
PXR1	YGR280C	GCV2	P49095	1034 aa		5.19	□□□□□ -1.58
PXR1	YGR280C	SFB2	P53953	876 aa		5.19	□□□□□ -1.58
PXR1	YGR280C	STP1	Q00947	519 aa		5.19	□□□□□ -1.58
PXR1	YGR280C	RPS9A	O13516	197 aa	Known RBP	5.18	□□□□□ -1.58
PXR1	YGR280C	MRPL7	P36519	292 aa		5.18	□□□□□ -1.58
PXR1	YGR280C	RIM4	P38741	713 aa		5.18	□□□□□ -1.58
PXR1	YGR280C	VPS8	P39702	1274 aa		5.18	□□□□□ -1.58
PXR1	YGR280C	VID27	P40157	782 aa		5.18	□□□□□ -1.58
PXR1	YGR280C	UBP15	P50101	1230 aa		5.18	□□□□□ -1.58
PXR1	YGR280C	PSP2	P50109	593 aa	Known RBP	5.18	□□□□□ -1.58
PXR1	YGR280C	RPS14A	P06367	137 aa	Known RBP	5.17	□□□□□ -1.58
PXR1	YGR280C	TIF1	P10081	395 aa	Known RBP	5.17	□□□□□ -1.58
PXR1	YGR280C	SAF1	P38352	637 aa		5.17	□□□□□ -1.58
PXR1	YGR280C	RPS14B	P39516	138 aa	Known RBP	5.17	□□□□□ -1.58
PXR1	YGR280C	BOI2	P39969	1040 aa		5.17	□□□□□ -1.58
PXR1	YGR280C	CUS1	Q02554	436 aa	Predicted RBP	5.17	□□□□□ -1.58
PXR1	YGR280C	UTP4	Q06679	776 aa	Known RBP	5.17	□□□□□ -1.58
PXR1	YGR280C	YPR084W	Q06821	456 aa		5.17	□□□□□ -1.58
PXR1	YGR280C	GEF1	P37020	779 aa		5.16	□□□□□ -1.58
PXR1	YGR280C	ESL1	P40456	1118 aa		5.16	□□□□□ -1.58
PXR1	YGR280C	SDS3	P40505	327 aa		5.16	□□□□□ -1.58
PXR1	YGR280C	MVP1	P40959	511 aa	Known RBP	5.16	□□□□□ -1.58
PXR1	YGR280C	YGR266W	P53326	701 aa		5.16	□□□□□ -1.58
PXR1	YGR280C	YNR021W	P53723	404 aa	Known RBP	5.16	□□□□□ -1.58
PXR1	YGR280C	MRD1	Q06106	887 aa	Known RBP	5.16	□□□□□ -1.58
PXR1	YGR280C	CSF1	Q12150	2958 aa		5.16	□□□□□ -1.58
PXR1	YGR280C	RGR1	P19263	1082 aa		5.15	□□□□□ -1.59
PXR1	YGR280C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.59	not detected
PXR1	YGR280C	KIN82	P25341	720 aa		5.15	□□□□□ -1.59
PXR1	YGR280C	VPS45	P38932	577 aa		5.15	□□□□□ -1.59
PXR1	YGR280C	STR2	P47164	639 aa		5.15	□□□□□ -1.59
PXR1	YGR280C	CTR1	P49573	406 aa		5.15	□□□□□ -1.59
PXR1	YGR280C	ALT2	P52892	507 aa		5.15	□□□□□ -1.59
PXR1	YGR280C	HUL5	P53119	910 aa		5.15	□□□□□ -1.59
PXR1	YGR280C	ATF2	P53296	535 aa		5.15	□□□□□ -1.59
PXR1	YGR280C	YNR061C	P53747	219 aa		5.15	□□□□□ -1.59
PXR1	YGR280C	CWC24	P53769	259 aa		5.15	□□□□□ -1.59
PXR1	YGR280C	MUK1	Q02866	612 aa		5.15	□□□□□ -1.59
PXR1	YGR280C	YHM2	Q04013	314 aa		5.15	□□□□□ -1.59
PXR1	YGR280C	VIP1	Q06685	1146 aa	Known RBP	5.15	□□□□□ -1.59
PXR1	YGR280C	GPI13	Q07830	1017 aa		5.15	□□□□□ -1.59
PXR1	YGR280C	BUD2	P33314	1104 aa		5.14	□□□□□ -1.59
PXR1	YGR280C	GCS1	P35197	352 aa		5.14	□□□□□ -1.59
PXR1	YGR280C	TAF1	P46677	1066 aa		5.14	□□□□□ -1.59
PXR1	YGR280C	LIF1	P53150	421 aa		5.14	□□□□□ -1.59
PXR1	YGR280C	YAT1	P80235	687 aa		5.14	□□□□□ -1.59
PXR1	YGR280C	NSE5	Q03718	556 aa		5.14	□□□□□ -1.59
PXR1	YGR280C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
PXR1	YGR280C	TFB4	Q12004	338 aa		5.14	□□□□□ -1.59
PXR1	YGR280C	HMG2	P12684	1045 aa		5.13	□□□□□ -1.59
PXR1	YGR280C	TPD3	P31383	635 aa		5.13	□□□□□ -1.59
PXR1	YGR280C	PPE1	P38796	400 aa		5.13	□□□□□ -1.59
PXR1	YGR280C	YHR202W	P38887	602 aa		5.13	□□□□□ -1.59
PXR1	YGR280C	RTS1	P38903	757 aa		5.13	□□□□□ -1.59
PXR1	YGR280C	PES4	P39684	611 aa		5.13	□□□□□ -1.59
PXR1	YGR280C	SAD1	P43589	448 aa		5.13	□□□□□ -1.59
PXR1	YGR280C	IRC8	P47046	822 aa		5.13	□□□□□ -1.59
PXR1	YGR280C	LEE1	Q02799	301 aa	Known RBP	5.13	□□□□□ -1.59
PXR1	YGR280C	SVF1	Q05515	481 aa		5.13	□□□□□ -1.59
PXR1	YGR280C	MRI1	Q06489	411 aa	Known RBP	5.13	□□□□□ -1.59
PXR1	YGR280C	RAD61	Q99359	647 aa		5.13	□□□□□ -1.59
PXR1	YGR280C	YLR422W	Q06409	1932 aa		5.13	□□□□□ -1.59
PXR1	YGR280C	TRA1	P38811	3744 aa		5.12	□□□□□ -1.59
PXR1	YGR280C	CET1	O13297	549 aa	Predicted RBP	5.12	□□□□□ -1.59
PXR1	YGR280C	SPE1	P08432	466 aa		5.12	□□□□□ -1.59
PXR1	YGR280C	PCM1	P38628	557 aa	Known RBP	5.12	□□□□□ -1.59
PXR1	YGR280C	OCA5	P38738	679 aa		5.12	□□□□□ -1.59
PXR1	YGR280C	SSF1	P38789	453 aa	Predicted RBP	5.12	□□□□□ -1.59
PXR1	YGR280C	SLN1	P39928	1220 aa	Predicted RBP	5.12	□□□□□ -1.59
PXR1	YGR280C	ENP2	P48234	707 aa	Known RBP	5.12	□□□□□ -1.59
PXR1	YGR280C	YGL081W	P53156	320 aa		5.12	□□□□□ -1.59
PXR1	YGR280C	YNL134C	P53912	376 aa	Known RBP	5.12	□□□□□ -1.59
PXR1	YGR280C	PTA1	Q01329	785 aa	Predicted RBP	5.12	□□□□□ -1.59
PXR1	YGR280C	YPR109W	Q06104	294 aa		5.12	□□□□□ -1.59
PXR1	YGR280C	SUE1	Q06524	206 aa		5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 116.2 ms