RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W SIP5P40210 489 aaKnown RBP3.95□□□□□ -1.78
SPT6YGR116W ARI1P53111 347 aaKnown RBP3.95□□□□□ -1.78
SPT6YGR116W YDR341CQ05506 607 aaKnown RBP3.95□□□□□ -1.78
SPT6YGR116W ATG13Q06628 738 aa3.95□□□□□ -1.78
SPT6YGR116W YPR078CQ06813 372 aa3.95□□□□□ -1.78
SPT6YGR116W ALR1Q08269 859 aa3.95□□□□□ -1.78
SPT6YGR116W SLP1Q12232 587 aa3.95□□□□□ -1.78
SPT6YGR116W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
SPT6YGR116W RTP1Q12751 981 aa3.95□□□□□ -1.78
SPT6YGR116W REC107P21651 314 aa3.95□□□□□ -1.78
SPT6YGR116W APL1P27351 700 aa3.95□□□□□ -1.78
SPT6YGR116W RPC82P32349 654 aa3.95□□□□□ -1.78
SPT6YGR116W NIP100P33420 868 aa3.95□□□□□ -1.78
SPT6YGR116W ECM4P36156 370 aa3.95□□□□□ -1.78
SPT6YGR116W RXT2P38255 430 aa3.95□□□□□ -1.78
SPT6YGR116W AIP1P46680 615 aaKnown RBP3.95□□□□□ -1.78
SPT6YGR116W SPO75Q07798 868 aa3.95□□□□□ -1.78
SPT6YGR116W FRA1Q07825 749 aa3.95□□□□□ -1.78
SPT6YGR116W IOC2Q12072 812 aa3.95□□□□□ -1.78
SPT6YGR116W RUP1Q12242 671 aa3.95□□□□□ -1.78
SPT6YGR116W PRT1P06103 763 aaKnown RBP3.95□□□□□ -1.78
SPT6YGR116W CDC6P09119 513 aa3.95□□□□□ -1.78
SPT6YGR116W REV7P38927 245 aa3.95□□□□□ -1.78
SPT6YGR116W UBP6P43593 499 aaKnown RBP3.95□□□□□ -1.78
SPT6YGR116W PKH3Q03306 898 aaPredicted RBP3.95□□□□□ -1.78
SPT6YGR116W CHS5Q12114 671 aaKnown RBP3.95□□□□□ -1.78
SPT6YGR116W BUG1Q12191 341 aa3.95□□□□□ -1.78
SPT6YGR116W RPC25P35718 212 aa3.95□□□□□ -1.78
SPT6YGR116W APL2P36000 726 aaPredicted RBP3.95□□□□□ -1.78
SPT6YGR116W AIM20P40451 204 aa3.95□□□□□ -1.78
SPT6YGR116W TDA10P42938 290 aa3.95□□□□□ -1.78
SPT6YGR116W VTC2P43585 828 aa3.95□□□□□ -1.78
SPT6YGR116W IOC3P43596 787 aa3.95□□□□□ -1.78
SPT6YGR116W SHE9Q04172 456 aa3.95□□□□□ -1.78
SPT6YGR116W ITT1Q04638 464 aa3.95□□□□□ -1.78
SPT6YGR116W TY4B-HP0C2J7 1802 aa3.94□□□□□ -1.78
SPT6YGR116W TY4B-JP47024 1803 aa3.94□□□□□ -1.78
SPT6YGR116W SRV2P17555 526 aaKnown RBP3.94□□□□□ -1.78
SPT6YGR116W RPC19P28000 142 aaKnown RBP3.94□□□□□ -1.78
SPT6YGR116W VPH2P32341 215 aa3.94□□□□□ -1.78
SPT6YGR116W MVD1P32377 396 aaKnown RBP3.94□□□□□ -1.78
SPT6YGR116W KAR9P32526 644 aa3.94□□□□□ -1.78
SPT6YGR116W NPL6P32832 435 aa3.94□□□□□ -1.78
SPT6YGR116W HXT10P43581 546 aa3.94□□□□□ -1.78
SPT6YGR116W KAP114P53067 1004 aa3.94□□□□□ -1.78
SPT6YGR116W COG6P53959 839 aa3.94□□□□□ -1.78
SPT6YGR116W RPT6Q01939 405 aaKnown RBP3.94□□□□□ -1.78
SPT6YGR116W NOC3Q07896 663 aaPredicted RBP3.94□□□□□ -1.78
SPT6YGR116W RLP24Q07915 199 aaKnown RBP3.94□□□□□ -1.78
SPT6YGR116W VHS3Q08438 674 aa3.94□□□□□ -1.78
SPT6YGR116W ADR1P07248 1323 aa3.94□□□□□ -1.78
SPT6YGR116W AI2P03876 854 aa3.94□□□□□ -1.78
SPT6YGR116W SPO16P17122 198 aa3.94□□□□□ -1.78
SPT6YGR116W IME1P21190 360 aa3.94□□□□□ -1.78
SPT6YGR116W OSM1P21375 501 aaKnown RBP3.94□□□□□ -1.78
SPT6YGR116W URB2P47108 1174 aa3.94□□□□□ -1.78
SPT6YGR116W UBP15P50101 1230 aa3.94□□□□□ -1.78
SPT6YGR116W LSC2P53312 427 aa3.94□□□□□ -1.78
SPT6YGR116W ORM2Q06144 216 aa3.94□□□□□ -1.78
SPT6YGR116W YPR097WQ06839 1073 aa3.94□□□□□ -1.78
SPT6YGR116W MPC54Q08550 464 aa3.94□□□□□ -1.78
SPT6YGR116W SSB1P11484 613 aaKnown RBP3.94□□□□□ -1.78
SPT6YGR116W PYC2P32327 1180 aaKnown RBP3.94□□□□□ -1.78
SPT6YGR116W SEC66P33754 206 aa3.94□□□□□ -1.78
SPT6YGR116W YBL055CP34220 418 aaPredicted RBP3.94□□□□□ -1.78
SPT6YGR116W FES1P38260 290 aa3.94□□□□□ -1.78
SPT6YGR116W SSB2P40150 613 aaKnown RBP3.94□□□□□ -1.78
SPT6YGR116W YMR196WQ04336 1088 aa3.94□□□□□ -1.78
SPT6YGR116W TFC6Q06339 672 aa3.94□□□□□ -1.78
SPT6YGR116W VIP1Q06685 1146 aaKnown RBP3.94□□□□□ -1.78
SPT6YGR116W VIK1Q12045 647 aa3.94□□□□□ -1.78
SPT6YGR116W SUI3P09064 285 aaKnown RBP3.93□□□□□ -1.78
SPT6YGR116W MET4P32389 672 aa3.93□□□□□ -1.78
SPT6YGR116W PET100P38958 111 aa3.93□□□□□ -1.78
SPT6YGR116W AXL1P40851 1208 aa3.93□□□□□ -1.78
SPT6YGR116W DAK2P43550 591 aa3.93□□□□□ -1.78
SPT6YGR116W MCM6P53091 1017 aaKnown RBP3.93□□□□□ -1.78
SPT6YGR116W COS6P53344 381 aa3.93□□□□□ -1.78
SPT6YGR116W SFB2P53953 876 aa3.93□□□□□ -1.78
SPT6YGR116W HPC2Q01448 625 aa3.93□□□□□ -1.78
SPT6YGR116W BDF2Q07442 638 aa3.93□□□□□ -1.78
SPT6YGR116W RIX7Q07844 837 aaKnown RBP3.93□□□□□ -1.78
SPT6YGR116W CWC2Q12046 339 aaPredicted RBP3.93□□□□□ -1.78
SPT6YGR116W PTC5Q12511 572 aa3.93□□□□□ -1.78
SPT6YGR116W PRP45P28004 379 aaPredicted RBP3.93□□□□□ -1.78
SPT6YGR116W YKL091CP33324 310 aaKnown RBP3.93□□□□□ -1.78
SPT6YGR116W MRP8P35719 219 aa3.93□□□□□ -1.78
SPT6YGR116W SPR3P41901 512 aa3.93□□□□□ -1.78
SPT6YGR116W NOP9P47077 666 aaKnown RBP3.93□□□□□ -1.78
SPT6YGR116W PCL10P53124 433 aa3.93□□□□□ -1.78
SPT6YGR116W RPS15Q01855 142 aaKnown RBP3.93□□□□□ -1.78
SPT6YGR116W UTP6Q02354 440 aaKnown RBP3.93□□□□□ -1.78
SPT6YGR116W YOR111WQ99210 232 aa3.93□□□□□ -1.78
SPT6YGR116W MSB1P21339 1137 aaKnown RBP3.93□□□□□ -1.78
SPT6YGR116W VPS1P21576 704 aaKnown RBP3.93□□□□□ -1.78
SPT6YGR116W SMC1P32908 1225 aa3.93□□□□□ -1.78
SPT6YGR116W YBR062CP38239 180 aa3.93□□□□□ -1.78
SPT6YGR116W TIF5P38431 405 aaKnown RBP3.93□□□□□ -1.78
SPT6YGR116W KIC1P38692 1080 aa3.93□□□□□ -1.78
SPT6YGR116W SPC72P39723 622 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms