RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C TRS120Q04183 1289 aa3.32□□□□□ -1.88
PRE4YFR050C GIS4Q04233 774 aa3.32□□□□□ -1.88
PRE4YFR050C DIB1Q06819 143 aaPredicted RBP3.32□□□□□ -1.88
PRE4YFR050C YBR056W-AI2HB52 66 aa3.31□□□□□ -1.88
PRE4YFR050C MRP10O75012 95 aa3.31□□□□□ -1.88
PRE4YFR050C TRL1P09880 827 aaKnown RBP3.31□□□□□ -1.88
PRE4YFR050C FUS1P11710 512 aa3.31□□□□□ -1.88
PRE4YFR050C SSF1P38789 453 aaPredicted RBP3.31□□□□□ -1.88
PRE4YFR050C YGR266WP53326 701 aa3.31□□□□□ -1.88
PRE4YFR050C CFT2Q12102 859 aaPredicted RBP3.31□□□□□ -1.88
PRE4YFR050C SLP1Q12232 587 aa3.31□□□□□ -1.88
PRE4YFR050C PRE10P21242 288 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
PRE4YFR050C MCX1P38323 520 aaPredicted RBP3.3□□□□□ -1.88
PRE4YFR050C YHL050CP38721 697 aa3.3□□□□□ -1.88
PRE4YFR050C YPT35P38815 214 aaKnown RBP3.3□□□□□ -1.88
PRE4YFR050C YHR219WP38900 624 aa3.3□□□□□ -1.88
PRE4YFR050C INP51P40559 946 aaKnown RBP3.3□□□□□ -1.88
PRE4YFR050C MDJ2P42834 146 aa3.3□□□□□ -1.88
PRE4YFR050C SOK2P53438 785 aaPredicted RBP3.3□□□□□ -1.88
PRE4YFR050C EMI2Q04409 500 aaKnown RBP3.3□□□□□ -1.88
PRE4YFR050C BSC2Q05611 235 aa3.3□□□□□ -1.88
PRE4YFR050C PHR1P05066 565 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
PRE4YFR050C HEM1P09950 548 aaPredicted RBP3.29□□□□□ -1.88
PRE4YFR050C NAP1P25293 417 aaKnown RBP3.29□□□□□ -1.88
PRE4YFR050C TAT1P38085 619 aa3.29□□□□□ -1.88
PRE4YFR050C RRM3P38766 723 aa3.29□□□□□ -1.88
PRE4YFR050C TED1P40533 473 aa3.29□□□□□ -1.88
PRE4YFR050C YNL011CP53980 444 aa3.29□□□□□ -1.88
PRE4YFR050C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
PRE4YFR050C NUT2Q06213 157 aa3.29□□□□□ -1.88
PRE4YFR050C IMG2P25642 146 aaPredicted RBP3.28□□□□□ -1.88
PRE4YFR050C PYC2P32327 1180 aaKnown RBP3.28□□□□□ -1.88
PRE4YFR050C SEG2P34250 1132 aa3.28□□□□□ -1.88
PRE4YFR050C YHL008CP38750 627 aa3.28□□□□□ -1.88
PRE4YFR050C GIP2P40036 548 aa3.28□□□□□ -1.88
PRE4YFR050C NEO1P40527 1151 aa3.28□□□□□ -1.88
PRE4YFR050C GSM1P42950 618 aa3.28□□□□□ -1.88
PRE4YFR050C YGL082WP53155 381 aa3.28□□□□□ -1.88
PRE4YFR050C YGR130CP53278 816 aa3.28□□□□□ -1.88
PRE4YFR050C CDC55Q00362 526 aa3.28□□□□□ -1.88
PRE4YFR050C SYF1Q04048 859 aaPredicted RBP3.28□□□□□ -1.88
PRE4YFR050C YDR215CQ12240 137 aa3.28□□□□□ -1.88
PRE4YFR050C FRT1Q99332 602 aa3.28□□□□□ -1.88
PRE4YFR050C SAC7P17121 654 aa3.27□□□□□ -1.89
PRE4YFR050C SLD2P34252 453 aa3.27□□□□□ -1.89
PRE4YFR050C MXR1P40029 184 aa3.27□□□□□ -1.89
PRE4YFR050C LEM3P42838 414 aa3.27□□□□□ -1.89
PRE4YFR050C PRY1P47032 299 aa3.27□□□□□ -1.89
PRE4YFR050C SAM37P50110 327 aa3.27□□□□□ -1.89
PRE4YFR050C GUP1P53154 560 aa3.27□□□□□ -1.89
PRE4YFR050C RSC4Q02206 625 aa3.27□□□□□ -1.89
PRE4YFR050C YUR1P26725 428 aa3.26□□□□□ -1.89
PRE4YFR050C SEC20P28791 383 aa3.26□□□□□ -1.89
PRE4YFR050C YKL097CP34245 136 aa3.26□□□□□ -1.89
PRE4YFR050C TFA2P36145 328 aa3.26□□□□□ -1.89
PRE4YFR050C PAN5P38787 379 aa3.26□□□□□ -1.89
PRE4YFR050C PPE1P38796 400 aa3.26□□□□□ -1.89
PRE4YFR050C SKN7P38889 622 aa3.26□□□□□ -1.89
PRE4YFR050C SLN1P39928 1220 aaPredicted RBP3.26□□□□□ -1.89
PRE4YFR050C LSB6P42951 607 aa3.26□□□□□ -1.89
PRE4YFR050C YJR124CP47159 448 aa3.26□□□□□ -1.89
PRE4YFR050C DSE4P53753 1117 aa3.26□□□□□ -1.89
PRE4YFR050C SPO71Q03868 1245 aa3.26□□□□□ -1.89
PRE4YFR050C GYL1Q04322 720 aa3.26□□□□□ -1.89
PRE4YFR050C LCD1Q04377 747 aa3.26□□□□□ -1.89
PRE4YFR050C NOC3Q07896 663 aaPredicted RBP3.26□□□□□ -1.89
PRE4YFR050C MET7Q08645 548 aa3.26□□□□□ -1.89
PRE4YFR050C SOG2Q08817 791 aa3.26□□□□□ -1.89
PRE4YFR050C ECM29P38737 1868 aa3.25□□□□□ -1.89
PRE4YFR050C TY4B-PA0A0B7P3V8 1104 aa3.25□□□□□ -1.89
PRE4YFR050C LEU2P04173 364 aaPredicted RBP3.25□□□□□ -1.89
PRE4YFR050C BET2P20133 325 aa3.25□□□□□ -1.89
PRE4YFR050C YCK2P23292 546 aaKnown RBP3.25□□□□□ -1.89
PRE4YFR050C GCD6P32501 712 aaKnown RBP3.25□□□□□ -1.89
PRE4YFR050C PET127P32606 800 aa3.25□□□□□ -1.89
PRE4YFR050C PPX1P38698 397 aa3.25□□□□□ -1.89
PRE4YFR050C CIC1P38779 376 aaKnown RBP3.25□□□□□ -1.89
PRE4YFR050C KEL1P38853 1164 aaKnown RBP3.25□□□□□ -1.89
PRE4YFR050C YFR016CP43597 1233 aaKnown RBP3.25□□□□□ -1.89
PRE4YFR050C MTR4P47047 1073 aaKnown RBP3.25□□□□□ -1.89
PRE4YFR050C BUD9P53226 547 aa3.25□□□□□ -1.89
PRE4YFR050C YML053CQ04978 212 aa3.25□□□□□ -1.89
PRE4YFR050C PEX19Q07418 342 aa3.25□□□□□ -1.89
PRE4YFR050C SGO1Q08490 590 aa3.25□□□□□ -1.89
PRE4YFR050C MCA1Q08601 432 aa3.25□□□□□ -1.89
PRE4YFR050C MSC6Q08818 692 aaKnown RBP3.25□□□□□ -1.89
PRE4YFR050C MNL2Q12205 849 aa3.25□□□□□ -1.89
PRE4YFR050C TY4A-HQ6Q5P6 413 aa3.25□□□□□ -1.89
PRE4YFR050C HRP1Q99383 534 aaKnown RBP3.25□□□□□ -1.89
PRE4YFR050C AI3P03877 415 aa3.24□□□□□ -1.89
PRE4YFR050C SBP1P10080 294 aaKnown RBP3.24□□□□□ -1.89
PRE4YFR050C PUF4P25339 888 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
PRE4YFR050C POT1P27796 417 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
PRE4YFR050C SYN8P31377 255 aa3.24□□□□□ -1.89
PRE4YFR050C SFA1P32771 386 aa3.24□□□□□ -1.89
PRE4YFR050C MAE1P36013 669 aaKnown RBP3.24□□□□□ -1.89
PRE4YFR050C MCD4P36051 919 aa3.24□□□□□ -1.89
PRE4YFR050C CCT8P47079 568 aaKnown RBP3.24□□□□□ -1.89
PRE4YFR050C YNR065CP53751 1116 aa3.24□□□□□ -1.89
PRE4YFR050C CTR9P89105 1077 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms