RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W YEF3P16521 1044 aaKnown RBP5.97□□□□□ -1.45
UBP9YER098W RPA135P22138 1203 aaKnown RBP5.97□□□□□ -1.45
UBP9YER098W YJR124CP47159 448 aa5.97□□□□□ -1.45
UBP9YER098W RSC2Q06488 889 aa5.97□□□□□ -1.45
UBP9YER098W YBT1P32386 1661 aa5.96□□□□□ -1.45
UBP9YER098W TFA2P36145 328 aa5.96□□□□□ -1.45
UBP9YER098W BAP2P38084 609 aa5.96□□□□□ -1.45
UBP9YER098W YBR071WP38243 211 aa5.96□□□□□ -1.45
UBP9YER098W XDJ1P39102 459 aa5.96□□□□□ -1.45
UBP9YER098W INP51P40559 946 aaKnown RBP5.96□□□□□ -1.45
UBP9YER098W UBP6P43593 499 aaKnown RBP5.96□□□□□ -1.45
UBP9YER098W ATG16Q03818 150 aa5.96□□□□□ -1.45
UBP9YER098W VMS1Q04311 632 aaKnown RBP5.96□□□□□ -1.45
UBP9YER098W TRM3Q07527 1436 aa5.96□□□□□ -1.45
UBP9YER098W NUP157P40064 1391 aaKnown RBP5.96□□□□□ -1.46
UBP9YER098W EUG1P32474 517 aa5.96□□□□□ -1.46
UBP9YER098W ADD66P36040 267 aa5.96□□□□□ -1.46
UBP9YER098W TYS1P36421 394 aaKnown RBP5.96□□□□□ -1.46
UBP9YER098W NEM1P38757 446 aa5.96□□□□□ -1.46
UBP9YER098W BOI2P39969 1040 aa5.96□□□□□ -1.46
UBP9YER098W MDG1P53885 366 aa5.96□□□□□ -1.46
UBP9YER098W TGL2P54857 326 aa5.96□□□□□ -1.46
UBP9YER098W UTP5Q04177 643 aaKnown RBP5.96□□□□□ -1.46
UBP9YER098W RPO31P04051 1460 aa5.95□□□□□ -1.46
UBP9YER098W ATP4P05626 244 aa5.95□□□□□ -1.46
UBP9YER098W HTS1P07263 546 aaKnown RBP5.95□□□□□ -1.46
UBP9YER098W MSD1P15179 658 aaKnown RBP5.95□□□□□ -1.46
UBP9YER098W MRPL16P38064 232 aa5.95□□□□□ -1.46
UBP9YER098W SIP5P40210 489 aaKnown RBP5.95□□□□□ -1.46
UBP9YER098W DSN1P40568 576 aa5.95□□□□□ -1.46
UBP9YER098W PTK2P47116 818 aaKnown RBP5.95□□□□□ -1.46
UBP9YER098W PEX14P53112 341 aa5.95□□□□□ -1.46
UBP9YER098W RSC1P53236 928 aa5.95□□□□□ -1.46
UBP9YER098W YDR306CQ06640 478 aa5.95□□□□□ -1.46
UBP9YER098W GSY1P23337 708 aa5.95□□□□□ -1.46
UBP9YER098W MPH1P40562 993 aa5.95□□□□□ -1.46
UBP9YER098W GPP1P41277 250 aaKnown RBP5.95□□□□□ -1.46
UBP9YER098W SLS1P42900 643 aa5.95□□□□□ -1.46
UBP9YER098W LSB6P42951 607 aa5.95□□□□□ -1.46
UBP9YER098W YJR098CP47139 656 aa5.95□□□□□ -1.46
UBP9YER098W TMA64Q04600 565 aaKnown RBP5.95□□□□□ -1.46
UBP9YER098W MPD2Q99316 277 aa5.95□□□□□ -1.46
UBP9YER098W PIF1P07271 859 aa5.94□□□□□ -1.46
UBP9YER098W AFT1P22149 690 aa5.94□□□□□ -1.46
UBP9YER098W ASH1P34233 588 aa5.94□□□□□ -1.46
UBP9YER098W UBP15P50101 1230 aa5.94□□□□□ -1.46
UBP9YER098W HST3P53687 447 aa5.94□□□□□ -1.46
UBP9YER098W BIO5P53744 561 aaKnown RBP5.94□□□□□ -1.46
UBP9YER098W YNR065CP53751 1116 aa5.94□□□□□ -1.46
UBP9YER098W YNL034WP53963 612 aa5.94□□□□□ -1.46
UBP9YER098W YNL018CP53976 612 aa5.94□□□□□ -1.46
UBP9YER098W SVL3Q03088 825 aaKnown RBP5.94□□□□□ -1.46
UBP9YER098W NKP1Q12493 238 aa5.94□□□□□ -1.46
UBP9YER098W TY2B-LR1P0C2J3 1770 aa5.94□□□□□ -1.46
UBP9YER098W TY2B-FP0CX63 1770 aa5.94□□□□□ -1.46
UBP9YER098W TY2B-GR2P0CX64 1770 aa5.94□□□□□ -1.46
UBP9YER098W TY2B-CP25384 1770 aa5.94□□□□□ -1.46
UBP9YER098W TY2B-DR2Q03494 1770 aa5.94□□□□□ -1.46
UBP9YER098W TY1B-DR1Q03855 1755 aa5.94□□□□□ -1.46
UBP9YER098W TY2B-DR3Q07791 1770 aaKnown RBP5.94□□□□□ -1.46
UBP9YER098W TY2B-OR1Q12113 1770 aa5.94□□□□□ -1.46
UBP9YER098W TY2B-DR1Q12472 1770 aa5.94□□□□□ -1.46
UBP9YER098W TY2B-OR2Q12501 1770 aa5.94□□□□□ -1.46
UBP9YER098W RAD53P22216 821 aa5.94□□□□□ -1.46
UBP9YER098W DOM34P33309 386 aa5.94□□□□□ -1.46
UBP9YER098W FET4P40988 552 aa5.94□□□□□ -1.46
UBP9YER098W YJL171CP46992 396 aa5.94□□□□□ -1.46
UBP9YER098W LCD1Q04377 747 aa5.94□□□□□ -1.46
UBP9YER098W YPR071WQ12346 211 aa5.94□□□□□ -1.46
UBP9YER098W AMS1P22855 1083 aa5.93□□□□□ -1.46
UBP9YER098W DPB3P27344 201 aa5.93□□□□□ -1.46
UBP9YER098W AAR2P32357 355 aaPredicted RBP5.93□□□□□ -1.46
UBP9YER098W AFG2P32794 780 aa5.93□□□□□ -1.46
UBP9YER098W ERP2P39704 215 aa5.93□□□□□ -1.46
UBP9YER098W SAH1P39954 449 aaKnown RBP5.93□□□□□ -1.46
UBP9YER098W PEA2P40091 420 aa5.93□□□□□ -1.46
UBP9YER098W MGS1P40151 587 aa5.93□□□□□ -1.46
UBP9YER098W AIR1P40507 360 aaKnown RBP5.93□□□□□ -1.46
UBP9YER098W HNT2P49775 206 aa5.93□□□□□ -1.46
UBP9YER098W YGR021WP53212 290 aa5.93□□□□□ -1.46
UBP9YER098W TRE2Q08693 809 aa5.93□□□□□ -1.46
UBP9YER098W LSP1Q12230 341 aaKnown RBP5.93□□□□□ -1.46
UBP9YER098W GDB1Q06625 1536 aa5.93□□□□□ -1.46
UBP9YER098W MLS1P30952 554 aa5.92□□□□□ -1.46
UBP9YER098W TFC4P33339 1025 aa5.92□□□□□ -1.46
UBP9YER098W PET10P36139 283 aa5.92□□□□□ -1.46
UBP9YER098W YNR063WP53749 607 aa5.92□□□□□ -1.46
UBP9YER098W HFD1Q04458 532 aa5.92□□□□□ -1.46
UBP9YER098W PLC1P32383 869 aa5.92□□□□□ -1.46
UBP9YER098W MPP10P47083 593 aaKnown RBP5.92□□□□□ -1.46
UBP9YER098W MTQ2Q03920 221 aaPredicted RBP5.92□□□□□ -1.46
UBP9YER098W IQG1Q12280 1495 aa5.92□□□□□ -1.46
UBP9YER098W CDC9P04819 755 aa5.91□□□□□ -1.46
UBP9YER098W PHR1P05066 565 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
UBP9YER098W CDC4P07834 779 aa5.91□□□□□ -1.46
UBP9YER098W SRD1P09007 221 aa5.91□□□□□ -1.46
UBP9YER098W SST2P11972 698 aaKnown RBP5.91□□□□□ -1.46
UBP9YER098W DAL5P15365 543 aa5.91□□□□□ -1.46
UBP9YER098W CLB1P24868 471 aa5.91□□□□□ -1.46
UBP9YER098W ALG3P38179 458 aa5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms