RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C COQ4O13525 335 aa4.51□□□□□ -1.69
CDC40YDR364C CYC1P00044 109 aaPredicted RBP4.51□□□□□ -1.69
CDC40YDR364C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
CDC40YDR364C RDH54P38086 958 aa4.51□□□□□ -1.69
CDC40YDR364C MDJ2P42834 146 aa4.51□□□□□ -1.69
CDC40YDR364C PLB2Q03674 706 aa4.51□□□□□ -1.69
CDC40YDR364C SSM4P40318 1319 aa4.51□□□□□ -1.69
CDC40YDR364C ADD66P36040 267 aa4.5□□□□□ -1.69
CDC40YDR364C CIC1P38779 376 aaKnown RBP4.5□□□□□ -1.69
CDC40YDR364C IQG1Q12280 1495 aa4.5□□□□□ -1.69
CDC40YDR364C ARO1P08566 1588 aaKnown RBP4.49□□□□□ -1.69
CDC40YDR364C SRB8P25648 1427 aa4.49□□□□□ -1.69
CDC40YDR364C DRS2P39524 1355 aa4.49□□□□□ -1.69
CDC40YDR364C HCM1P25364 564 aa4.49□□□□□ -1.69
CDC40YDR364C CCZ1P38273 704 aa4.49□□□□□ -1.69
CDC40YDR364C MNN10P50108 393 aaKnown RBP4.49□□□□□ -1.69
CDC40YDR364C ROT1Q03691 256 aa4.49□□□□□ -1.69
CDC40YDR364C FRT1Q99332 602 aa4.49□□□□□ -1.69
CDC40YDR364C SPO14P36126 1683 aa4.48□□□□□ -1.69
CDC40YDR364C ATE1P16639 503 aa4.48□□□□□ -1.69
CDC40YDR364C STE11P23561 717 aa4.48□□□□□ -1.69
CDC40YDR364C CDC20P26309 610 aa4.48□□□□□ -1.69
CDC40YDR364C TNA1P53322 534 aa4.48□□□□□ -1.69
CDC40YDR364C SUN4P53616 420 aa4.48□□□□□ -1.69
CDC40YDR364C CTF4Q01454 927 aa4.48□□□□□ -1.69
CDC40YDR364C HOS3Q02959 697 aaKnown RBP4.48□□□□□ -1.69
CDC40YDR364C OYE2Q03558 400 aaKnown RBP4.48□□□□□ -1.69
CDC40YDR364C JIP5Q06214 492 aaPredicted RBP4.48□□□□□ -1.69
CDC40YDR364C YBT1P32386 1661 aa4.47□□□□□ -1.69
CDC40YDR364C TRM3Q07527 1436 aa4.47□□□□□ -1.69
CDC40YDR364C KIP1P28742 1111 aa4.47□□□□□ -1.69
CDC40YDR364C PRP40P33203 583 aaKnown RBP4.47□□□□□ -1.69
CDC40YDR364C OCA5P38738 679 aa4.47□□□□□ -1.69
CDC40YDR364C PIK1P39104 1066 aa4.47□□□□□ -1.69
CDC40YDR364C NNF1P47149 201 aa4.47□□□□□ -1.69
CDC40YDR364C SVF1Q05515 481 aa4.47□□□□□ -1.69
CDC40YDR364C NUT2Q06213 157 aa4.47□□□□□ -1.69
CDC40YDR364C URN1Q06525 465 aaKnown RBP4.47□□□□□ -1.69
CDC40YDR364C NTO1Q12311 748 aa4.47□□□□□ -1.69
CDC40YDR364C YRF1-1P0CX20 1796 aa4.47□□□□□ -1.69
CDC40YDR364C YRF1-5P0CX21 1796 aa4.47□□□□□ -1.69
CDC40YDR364C YRF1-8P0CX22 1796 aa4.47□□□□□ -1.69
CDC40YDR364C KAR2P16474 682 aaKnown RBP4.46□□□□□ -1.7
CDC40YDR364C PMI40P29952 429 aaKnown RBP4.46□□□□□ -1.7
CDC40YDR364C SEC8P32855 1065 aa4.46□□□□□ -1.7
CDC40YDR364C LST4P34239 828 aa4.46□□□□□ -1.7
CDC40YDR364C MGE1P38523 228 aa4.46□□□□□ -1.7
CDC40YDR364C PEX28P38848 579 aa4.46□□□□□ -1.7
CDC40YDR364C RSM26P47141 266 aa4.46□□□□□ -1.7
CDC40YDR364C ULP1Q02724 621 aa4.46□□□□□ -1.7
CDC40YDR364C RXT3Q07458 294 aa4.46□□□□□ -1.7
CDC40YDR364C ACK1Q07622 623 aaPredicted RBP4.46□□□□□ -1.7
CDC40YDR364C RSB1Q08417 382 aa4.46□□□□□ -1.7
CDC40YDR364C UGA4P32837 571 aa4.45□□□□□ -1.7
CDC40YDR364C SQT1P35184 431 aa4.45□□□□□ -1.7
CDC40YDR364C PPX1P38698 397 aa4.45□□□□□ -1.7
CDC40YDR364C YGL140CP53120 1219 aa4.45□□□□□ -1.7
CDC40YDR364C RRP15Q06511 250 aaPredicted RBP4.45□□□□□ -1.7
CDC40YDR364C SPO21Q12411 609 aa4.45□□□□□ -1.7
CDC40YDR364C WHI5Q12416 295 aa4.45□□□□□ -1.7
CDC40YDR364C YSP2Q06681 1438 aa4.45□□□□□ -1.7
CDC40YDR364C BUD3P25558 1636 aa4.45□□□□□ -1.7
CDC40YDR364C CDC6P09119 513 aa4.44□□□□□ -1.7
CDC40YDR364C HEM13P11353 328 aaKnown RBP4.44□□□□□ -1.7
CDC40YDR364C SNF5P18480 905 aa4.44□□□□□ -1.7
CDC40YDR364C SRM1P21827 482 aa4.44□□□□□ -1.7
CDC40YDR364C AFG2P32794 780 aa4.44□□□□□ -1.7
CDC40YDR364C SPC42P36094 363 aa4.44□□□□□ -1.7
CDC40YDR364C RPN3P40016 523 aaKnown RBP4.44□□□□□ -1.7
CDC40YDR364C MCM6P53091 1017 aaKnown RBP4.44□□□□□ -1.7
CDC40YDR364C MMS1Q06211 1407 aa4.44□□□□□ -1.7
CDC40YDR364C GAL10P04397 699 aa4.43□□□□□ -1.7
CDC40YDR364C VPS35P34110 944 aa4.43□□□□□ -1.7
CDC40YDR364C CHS7P38843 316 aa4.43□□□□□ -1.7
CDC40YDR364C YML122CQ03207 126 aa4.43□□□□□ -1.7
CDC40YDR364C RSM24Q03976 319 aa4.43□□□□□ -1.7
CDC40YDR364C EST2Q06163 884 aa4.43□□□□□ -1.7
CDC40YDR364C FPR4Q06205 392 aaPredicted RBP4.43□□□□□ -1.7
CDC40YDR364C GPB1Q08886 897 aa4.43□□□□□ -1.7
CDC40YDR364C RAD53P22216 821 aa4.42□□□□□ -1.7
CDC40YDR364C AIM21P40563 679 aa4.42□□□□□ -1.7
CDC40YDR364C PBP1P53297 722 aaKnown RBP4.42□□□□□ -1.7
CDC40YDR364C TMA10Q06177 86 aa4.42□□□□□ -1.7
CDC40YDR364C BNR1P40450 1375 aa4.42□□□□□ -1.7
CDC40YDR364C GPB2P39717 880 aa4.41□□□□□ -1.7
CDC40YDR364C BUD21Q08492 214 aaPredicted RBP4.41□□□□□ -1.7
CDC40YDR364C PTC5Q12511 572 aa4.41□□□□□ -1.7
CDC40YDR364C PMA1P05030 918 aaKnown RBP4.4□□□□□ -1.7
CDC40YDR364C CMP2P14747 604 aa4.4□□□□□ -1.7
CDC40YDR364C SEC23P15303 768 aaKnown RBP4.4□□□□□ -1.7
CDC40YDR364C RFC5P38251 354 aa4.4□□□□□ -1.7
CDC40YDR364C PHO23P50947 330 aa4.4□□□□□ -1.7
CDC40YDR364C DAL4Q04895 635 aa4.4□□□□□ -1.7
CDC40YDR364C YPL260WQ08977 551 aa4.4□□□□□ -1.7
CDC40YDR364C DCG1P32460 244 aa4.4□□□□□ -1.71
CDC40YDR364C VPS62P53285 467 aa4.4□□□□□ -1.71
CDC40YDR364C DOS2P54858 310 aa4.4□□□□□ -1.71
CDC40YDR364C ADI1Q03677 179 aa4.4□□□□□ -1.71
CDC40YDR364C YOL098CQ12496 1037 aa4.4□□□□□ -1.71
CDC40YDR364C PHO4P07270 312 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms