RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	ACE2	P21192	770 aa		5.3	□□□□□ -1.56
SUP35	YDR172W	MET22	P32179	357 aa		5.3	□□□□□ -1.56
SUP35	YDR172W	YKT6	P36015	200 aa	Known RBP	5.3	□□□□□ -1.56
SUP35	YDR172W	RXT2	P38255	430 aa		5.3	□□□□□ -1.56
SUP35	YDR172W	EIS1	Q05050	843 aa	Known RBP	5.3	□□□□□ -1.56
SUP35	YDR172W	YPL260W	Q08977	551 aa		5.3	□□□□□ -1.56
SUP35	YDR172W	RRG1	Q12167	365 aa	Predicted RBP	5.3	□□□□□ -1.56
SUP35	YDR172W	PTC5	Q12511	572 aa		5.3	□□□□□ -1.56
SUP35	YDR172W	RAD61	Q99359	647 aa		5.3	□□□□□ -1.56
SUP35	YDR172W	RPP2B	P02400	110 aa	Known RBP	5.29	□□□□□ -1.56
SUP35	YDR172W	SWI5	P08153	709 aa		5.29	□□□□□ -1.56
SUP35	YDR172W	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.29	□□□□□ -1.56	not detected
SUP35	YDR172W	RPS7A	P26786	190 aa	Known RBP	5.29	□□□□□ -1.56
SUP35	YDR172W	TBS1	P38114	1094 aa		5.29	□□□□□ -1.56
SUP35	YDR172W	MAL31	P38156	614 aa		5.29	□□□□□ -1.56
SUP35	YDR172W	GIS4	Q04233	774 aa		5.29	□□□□□ -1.56
SUP35	YDR172W	MYO5	Q04439	1219 aa	Known RBP	5.29	□□□□□ -1.56
SUP35	YDR172W	ACK1	Q07622	623 aa	Predicted RBP	5.29	□□□□□ -1.56
SUP35	YDR172W	FLO11	P08640	1367 aa		5.29	□□□□□ -1.56
SUP35	YDR172W	HAP4	P14064	554 aa		5.28	□□□□□ -1.56
SUP35	YDR172W	DLD3	P39976	496 aa	Known RBP	5.28	□□□□□ -1.56
SUP35	YDR172W	YFL034W	P43564	1073 aa		5.28	□□□□□ -1.56
SUP35	YDR172W	YJR098C	P47139	656 aa		5.28	□□□□□ -1.56
SUP35	YDR172W	ROM1	P53046	1155 aa		5.28	□□□□□ -1.56
SUP35	YDR172W	SEN54	Q02825	467 aa	Predicted RBP	5.28	□□□□□ -1.56
SUP35	YDR172W	RPS6A	P0CX37	236 aa	Known RBP	5.28	□□□□□ -1.56
SUP35	YDR172W	RPS6B	P0CX38	236 aa	Predicted RBP	5.28	□□□□□ -1.56
SUP35	YDR172W	RNR3	P21672	869 aa	Known RBP	5.28	□□□□□ -1.56
SUP35	YDR172W	AFG2	P32794	780 aa		5.28	□□□□□ -1.56
SUP35	YDR172W	SHC1	P39000	512 aa		5.28	□□□□□ -1.56
SUP35	YDR172W	LYS14	P40971	790 aa		5.28	□□□□□ -1.56
SUP35	YDR172W	TMA16	Q08687	178 aa		5.28	□□□□□ -1.56
SUP35	YDR172W	AFT2	Q08957	416 aa		5.28	□□□□□ -1.56
SUP35	YDR172W	KEL3	Q08979	651 aa	Predicted RBP	5.28	□□□□□ -1.56
SUP35	YDR172W	RPS9B	P05755	195 aa	Known RBP	5.27	□□□□□ -1.57
SUP35	YDR172W	SAC6	P32599	642 aa	Known RBP	5.27	□□□□□ -1.57
SUP35	YDR172W	UTP7	P40055	554 aa	Known RBP	5.27	□□□□□ -1.57
SUP35	YDR172W	CUE3	P53137	624 aa	Known RBP	5.27	□□□□□ -1.57
SUP35	YDR172W	LSC2	P53312	427 aa		5.27	□□□□□ -1.57
SUP35	YDR172W	RPT6	Q01939	405 aa	Known RBP	5.27	□□□□□ -1.57
SUP35	YDR172W	MMR1	Q06324	491 aa		5.27	□□□□□ -1.57
SUP35	YDR172W	OPT2	Q06593	877 aa		5.27	□□□□□ -1.57
SUP35	YDR172W	SRP54	P20424	541 aa	Known RBP	5.27	□□□□□ -1.57
SUP35	YDR172W	CDC15	P27636	974 aa		5.27	□□□□□ -1.57
SUP35	YDR172W	VPS8	P39702	1274 aa		5.27	□□□□□ -1.57
SUP35	YDR172W	GDE1	Q02979	1223 aa		5.27	□□□□□ -1.57
SUP35	YDR172W	YDR341C	Q05506	607 aa	Known RBP	5.27	□□□□□ -1.57
SUP35	YDR172W	PSR2	Q07949	397 aa		5.27	□□□□□ -1.57
SUP35	YDR172W	ALG2	P43636	503 aa		5.26	□□□□□ -1.57
SUP35	YDR172W	SUM1	P46676	1062 aa		5.26	□□□□□ -1.57
SUP35	YDR172W	YGL138C	P53122	345 aa		5.26	□□□□□ -1.57
SUP35	YDR172W	SQS1	P53866	767 aa	Known RBP	5.26	□□□□□ -1.57
SUP35	YDR172W	CRF1	Q04930	467 aa		5.26	□□□□□ -1.57
SUP35	YDR172W	LCB5	Q06147	687 aa	Known RBP	5.26	□□□□□ -1.57
SUP35	YDR172W	ESC2	Q06340	456 aa		5.26	□□□□□ -1.57
SUP35	YDR172W	NBL1	Q3E7Y6	73 aa		5.26	□□□□□ -1.57
SUP35	YDR172W	MSM1	P22438	575 aa		5.25	□□□□□ -1.57
SUP35	YDR172W	RPL8B	P29453	256 aa	Known RBP	5.25	□□□□□ -1.57
SUP35	YDR172W	UBX7	P38349	436 aa		5.25	□□□□□ -1.57
SUP35	YDR172W	SSN3	P39073	555 aa		5.25	□□□□□ -1.57
SUP35	YDR172W	STU2	P46675	888 aa		5.25	□□□□□ -1.57
SUP35	YDR172W	YDR444W	Q04093	687 aa		5.25	□□□□□ -1.57
SUP35	YDR172W	YPQ2	Q06328	317 aa		5.25	□□□□□ -1.57
SUP35	YDR172W	APL4	Q12028	832 aa		5.25	□□□□□ -1.57
SUP35	YDR172W	TOM1	Q03280	3268 aa		5.25	□□□□□ -1.57
SUP35	YDR172W	CIT1	P00890	479 aa		5.25	□□□□□ -1.57
SUP35	YDR172W	MCM3	P24279	971 aa	Known RBP	5.25	□□□□□ -1.57
SUP35	YDR172W	BMH1	P29311	267 aa	Known RBP	5.25	□□□□□ -1.57
SUP35	YDR172W	CHS3	P29465	1165 aa		5.25	□□□□□ -1.57
SUP35	YDR172W	STV1	P37296	890 aa		5.25	□□□□□ -1.57
SUP35	YDR172W	PCH2	P38126	564 aa		5.25	□□□□□ -1.57
SUP35	YDR172W	TFG2	P41896	400 aa	Predicted RBP	5.25	□□□□□ -1.57
SUP35	YDR172W	OSW7	P43611	510 aa		5.25	□□□□□ -1.57
SUP35	YDR172W	YGR237C	P50089	785 aa		5.25	□□□□□ -1.57
SUP35	YDR172W	TRM44	Q02648	567 aa	Known RBP	5.25	□□□□□ -1.57
SUP35	YDR172W	TRS120	Q04183	1289 aa		5.25	□□□□□ -1.57
SUP35	YDR172W	SMD2	Q06217	110 aa	Known RBP	5.25	□□□□□ -1.57
SUP35	YDR172W	YOR296W	Q08748	1289 aa		5.25	□□□□□ -1.57
SUP35	YDR172W	GLY1	P37303	387 aa	Known RBP	5.24	□□□□□ -1.57
SUP35	YDR172W	ADE17	P38009	592 aa	Known RBP	5.24	□□□□□ -1.57
SUP35	YDR172W	RTT107	P38850	1070 aa		5.24	□□□□□ -1.57
SUP35	YDR172W	TCB2	P48231	1178 aa		5.24	□□□□□ -1.57
SUP35	YDR172W	VPS4	P52917	437 aa		5.24	□□□□□ -1.57
SUP35	YDR172W	FAR11	P53917	953 aa		5.24	□□□□□ -1.57
SUP35	YDR172W	MDM1	Q01846	1127 aa		5.24	□□□□□ -1.57
SUP35	YDR172W	DSE3	Q08729	430 aa		5.24	□□□□□ -1.57
SUP35	YDR172W	CEX1	Q12453	761 aa		5.24	□□□□□ -1.57
SUP35	YDR172W	MYO1	P08964	1928 aa		5.24	□□□□□ -1.57
SUP35	YDR172W	HIS4	P00815	799 aa	Known RBP	5.24	□□□□□ -1.57
SUP35	YDR172W	CYT1	P07143	309 aa		5.24	□□□□□ -1.57
SUP35	YDR172W	STT3	P39007	718 aa	Known RBP	5.24	□□□□□ -1.57
SUP35	YDR172W	TPM2	P40414	161 aa		5.24	□□□□□ -1.57
SUP35	YDR172W	VTC4	P47075	721 aa		5.24	□□□□□ -1.57
SUP35	YDR172W	ASE1	P50275	885 aa		5.24	□□□□□ -1.57
SUP35	YDR172W	FOL1	P53848	824 aa		5.24	□□□□□ -1.57
SUP35	YDR172W	VPS30	Q02948	557 aa		5.24	□□□□□ -1.57
SUP35	YDR172W	YLR346C	Q06139	101 aa		5.24	□□□□□ -1.57
SUP35	YDR172W	TUF1	P02992	437 aa	Known RBP	5.23	□□□□□ -1.57
SUP35	YDR172W	NUC1	P08466	329 aa		5.23	□□□□□ -1.57
SUP35	YDR172W	ALG1	P16661	449 aa		5.23	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms