RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	BUD6	P41697	788 aa		4.46	□□□□□ -1.7
CMD1	YBR109C	YLR257W	Q06146	321 aa	Known RBP	4.46	□□□□□ -1.7
CMD1	YBR109C	FMP25	Q08023	583 aa		4.46	□□□□□ -1.7
CMD1	YBR109C	IKI3	Q06706	1349 aa	Known RBP	4.46	□□□□□ -1.7
CMD1	YBR109C	UFD4	P33202	1483 aa		4.45	□□□□□ -1.7
CMD1	YBR109C	SMY2	P32909	740 aa	Known RBP	4.45	□□□□□ -1.7
CMD1	YBR109C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.45	□□□□□ -1.7	not detected
CMD1	YBR109C	NNK1	P36003	928 aa		4.45	□□□□□ -1.7
CMD1	YBR109C	PBY1	P38254	753 aa		4.45	□□□□□ -1.7
CMD1	YBR109C	YHR020W	P38708	688 aa	Known RBP	4.45	□□□□□ -1.7
CMD1	YBR109C	IRR1	P40541	1150 aa		4.45	□□□□□ -1.7
CMD1	YBR109C	PFD1	P46988	109 aa		4.45	□□□□□ -1.7
CMD1	YBR109C	PPM2	Q08282	695 aa		4.45	□□□□□ -1.7
CMD1	YBR109C	YOR131C	Q12486	218 aa		4.45	□□□□□ -1.7
CMD1	YBR109C	YOR1	P53049	1477 aa		4.44	□□□□□ -1.7
CMD1	YBR109C	KIP1	P28742	1111 aa		4.44	□□□□□ -1.7
CMD1	YBR109C	RPL8B	P29453	256 aa	Known RBP	4.44	□□□□□ -1.7
CMD1	YBR109C	MBP1	P39678	833 aa		4.44	□□□□□ -1.7
CMD1	YBR109C	SIP5	P40210	489 aa	Known RBP	4.44	□□□□□ -1.7
CMD1	YBR109C	FLC1	Q08967	793 aa		4.44	□□□□□ -1.7
CMD1	YBR109C	YPL260W	Q08977	551 aa		4.44	□□□□□ -1.7
CMD1	YBR109C	GNT1	Q12096	491 aa		4.44	□□□□□ -1.7
CMD1	YBR109C	DNA2	P38859	1522 aa		4.44	□□□□□ -1.7
CMD1	YBR109C	SPP41	P38904	1435 aa		4.44	□□□□□ -1.7
CMD1	YBR109C	ECM5	Q03214	1411 aa		4.44	□□□□□ -1.7
CMD1	YBR109C	ATG2	P53855	1592 aa		4.44	□□□□□ -1.7
CMD1	YBR109C	RKR1	Q04781	1562 aa		4.44	□□□□□ -1.7
CMD1	YBR109C	TUB2	P02557	457 aa	Known RBP	4.43	□□□□□ -1.7
CMD1	YBR109C	YER152C	P10356	443 aa		4.43	□□□□□ -1.7
CMD1	YBR109C	NMD2	P38798	1089 aa	Known RBP	4.43	□□□□□ -1.7
CMD1	YBR109C	NMD3	P38861	518 aa	Known RBP	4.43	□□□□□ -1.7
CMD1	YBR109C	GPB2	P39717	880 aa		4.43	□□□□□ -1.7
CMD1	YBR109C	SNF7	P39929	240 aa	Known RBP	4.43	□□□□□ -1.7
CMD1	YBR109C	OSW7	P43611	510 aa		4.43	□□□□□ -1.7
CMD1	YBR109C	ALT1	P52893	592 aa		4.43	□□□□□ -1.7
CMD1	YBR109C	RNH70	P53331	553 aa		4.43	□□□□□ -1.7
CMD1	YBR109C	YML122C	Q03207	126 aa		4.43	□□□□□ -1.7
CMD1	YBR109C	SPO75	Q07798	868 aa		4.43	□□□□□ -1.7
CMD1	YBR109C	SPO21	Q12411	609 aa		4.43	□□□□□ -1.7
CMD1	YBR109C	OSH2	Q12451	1283 aa		4.43	□□□□□ -1.7
CMD1	YBR109C	TOP2	P06786	1428 aa	Known RBP	4.42	□□□□□ -1.7
CMD1	YBR109C	RPS4A	P0CX35	261 aa	Known RBP	4.42	□□□□□ -1.7
CMD1	YBR109C	RPS4B	P0CX36	261 aa	Known RBP	4.42	□□□□□ -1.7
CMD1	YBR109C	RSP5	P39940	809 aa	Known RBP	4.42	□□□□□ -1.7
CMD1	YBR109C	YJL045W	P47052	634 aa		4.42	□□□□□ -1.7
CMD1	YBR109C	ERP6	P53198	216 aa		4.42	□□□□□ -1.7
CMD1	YBR109C	YGR125W	P53273	1036 aa		4.42	□□□□□ -1.7
CMD1	YBR109C	TPP1	Q03796	238 aa		4.42	□□□□□ -1.7
CMD1	YBR109C	HRK1	Q08732	759 aa	Known RBP	4.42	□□□□□ -1.7
CMD1	YBR109C	CIT1	P00890	479 aa		4.41	□□□□□ -1.7
CMD1	YBR109C	HSP60	P19882	572 aa	Known RBP	4.41	□□□□□ -1.7
CMD1	YBR109C	UTP8	P53276	713 aa	Known RBP	4.41	□□□□□ -1.7
CMD1	YBR109C	MRPL22	P53881	309 aa		4.41	□□□□□ -1.7
CMD1	YBR109C	EAR1	Q03212	550 aa		4.41	□□□□□ -1.7
CMD1	YBR109C	EAF1	Q06337	982 aa		4.41	□□□□□ -1.7
CMD1	YBR109C	SPP382	Q06411	708 aa	Predicted RBP	4.41	□□□□□ -1.7
CMD1	YBR109C	PUS7	Q08647	676 aa	Known RBP	4.41	□□□□□ -1.7
CMD1	YBR109C	LPX1	Q12405	387 aa	Known RBP	4.41	□□□□□ -1.7
CMD1	YBR109C	STH1	P32597	1359 aa		4.4	□□□□□ -1.7
CMD1	YBR109C	RPL11A	P0C0W9	174 aa	Known RBP	4.4	□□□□□ -1.71
CMD1	YBR109C	PRP9	P19736	530 aa	Known RBP	4.4	□□□□□ -1.71
CMD1	YBR109C	DBP2	P24783	546 aa	Known RBP	4.4	□□□□□ -1.71
CMD1	YBR109C	PPG1	P32838	368 aa		4.4	□□□□□ -1.71
CMD1	YBR109C	PNT1	P38969	423 aa		4.4	□□□□□ -1.71
CMD1	YBR109C	NUP82	P40368	713 aa		4.4	□□□□□ -1.71
CMD1	YBR109C	ALR2	P43553	858 aa		4.4	□□□□□ -1.71
CMD1	YBR109C	UBX5	Q06682	500 aa		4.4	□□□□□ -1.71
CMD1	YBR109C	RPL11B	Q3E757	174 aa	Predicted RBP	4.4	□□□□□ -1.71
CMD1	YBR109C	RPO31	P04051	1460 aa		4.4	□□□□□ -1.71
CMD1	YBR109C	SCC2	Q04002	1493 aa		4.4	□□□□□ -1.71
CMD1	YBR109C	TRM732	Q03496	1420 aa		4.39	□□□□□ -1.71
CMD1	YBR109C	SOD2	P00447	233 aa		4.39	□□□□□ -1.71
CMD1	YBR109C	GAL11	P19659	1081 aa		4.39	□□□□□ -1.71
CMD1	YBR109C	ARE1	P25628	610 aa		4.39	□□□□□ -1.71
CMD1	YBR109C	TIM23	P32897	222 aa		4.39	□□□□□ -1.71
CMD1	YBR109C	TOD6	P34219	525 aa		4.39	□□□□□ -1.71
CMD1	YBR109C	RRP14	P36080	434 aa	Known RBP	4.39	□□□□□ -1.71
CMD1	YBR109C	BRN1	P38170	754 aa		4.39	□□□□□ -1.71
CMD1	YBR109C	RPN3	P40016	523 aa	Known RBP	4.39	□□□□□ -1.71
CMD1	YBR109C	CHZ1	P40019	153 aa	Predicted RBP	4.39	□□□□□ -1.71
CMD1	YBR109C	MXR1	P40029	184 aa		4.39	□□□□□ -1.71
CMD1	YBR109C	ALG12	P53730	551 aa		4.39	□□□□□ -1.71
CMD1	YBR109C	CLU1	Q03690	1277 aa	Known RBP	4.39	□□□□□ -1.71
CMD1	YBR109C	SSY1	Q03770	852 aa		4.39	□□□□□ -1.71
CMD1	YBR109C	MDS3	P53094	1487 aa		4.38	□□□□□ -1.71
CMD1	YBR109C	CAN1	P04817	590 aa		4.38	□□□□□ -1.71
CMD1	YBR109C	HBS1	P32769	611 aa	Known RBP	4.38	□□□□□ -1.71
CMD1	YBR109C	YSC84	P32793	468 aa		4.38	□□□□□ -1.71
CMD1	YBR109C	SPC42	P36094	363 aa		4.38	□□□□□ -1.71
CMD1	YBR109C	GGA2	P38817	585 aa	Known RBP	4.38	□□□□□ -1.71
CMD1	YBR109C	YFL054C	P43549	646 aa		4.38	□□□□□ -1.71
CMD1	YBR109C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
CMD1	YBR109C	DOS2	P54858	310 aa		4.38	□□□□□ -1.71
CMD1	YBR109C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
CMD1	YBR109C	HOS3	Q02959	697 aa	Known RBP	4.38	□□□□□ -1.71
CMD1	YBR109C	TAF8	Q03750	510 aa		4.38	□□□□□ -1.71
CMD1	YBR109C	YDL177C	Q12257	170 aa		4.38	□□□□□ -1.71
CMD1	YBR109C	BPT1	P14772	1559 aa		4.38	□□□□□ -1.71
CMD1	YBR109C	PAN1	P32521	1480 aa		4.37	□□□□□ -1.71
CMD1	YBR109C	ERR1	P0CX10	437 aa		4.37	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 58.4 ms