RNA–Protein interactions for RNA: YNL062C

GCD10, Transcript of Subunit of tRNA (1-methyladenosine) methyltransferase with Gcd14p, yeast

Gene GCD10, Length 1,437 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD10	YNL062C	VPS62	P53285	467 aa		4.21	□□□□□ -1.74
GCD10	YNL062C	HOS3	Q02959	697 aa	Known RBP	4.21	□□□□□ -1.74
GCD10	YNL062C	YCS4	Q06156	1176 aa		4.2	□□□□□ -1.74
GCD10	YNL062C	TRL1	P09880	827 aa	Known RBP	4.19	□□□□□ -1.74
GCD10	YNL062C	ADD66	P36040	267 aa		4.19	□□□□□ -1.74
GCD10	YNL062C	MOH1	P38191	138 aa		4.19	□□□□□ -1.74
GCD10	YNL062C	RFC5	P38251	354 aa		4.19	□□□□□ -1.74
GCD10	YNL062C	UBA2	P52488	636 aa		4.19	□□□□□ -1.74
GCD10	YNL062C	BDF2	Q07442	638 aa		4.19	□□□□□ -1.74
GCD10	YNL062C	HAT1	Q12341	374 aa		4.19	□□□□□ -1.74
GCD10	YNL062C	SNF5	P18480	905 aa		4.18	□□□□□ -1.74
GCD10	YNL062C	GRS1	P38088	690 aa	Known RBP	4.18	□□□□□ -1.74
GCD10	YNL062C	ERP5	P38819	212 aa		4.18	□□□□□ -1.74
GCD10	YNL062C	ATF1	P40353	525 aa		4.18	□□□□□ -1.74
GCD10	YNL062C	RSM26	P47141	266 aa		4.18	□□□□□ -1.74
GCD10	YNL062C	GTF1	P53260	183 aa	Predicted RBP	4.18	□□□□□ -1.74
GCD10	YNL062C	YBL113C	Q7M4S9	792 aa		4.18	□□□□□ -1.74
GCD10	YNL062C	MON2	P48563	1636 aa	Predicted RBP	4.17	□□□□□ -1.74
GCD10	YNL062C	EMC1	P25574	760 aa		4.17	□□□□□ -1.74
GCD10	YNL062C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
GCD10	YNL062C	RIB2	Q12362	591 aa	Known RBP	4.17	□□□□□ -1.74
GCD10	YNL062C	MDJ2	P42834	146 aa		4.15	□□□□□ -1.74
GCD10	YNL062C	SAM37	P50110	327 aa		4.15	□□□□□ -1.74
GCD10	YNL062C	HMI1	Q12039	706 aa		4.15	□□□□□ -1.74
GCD10	YNL062C	KIN2	P13186	1147 aa	Known RBP	4.14	□□□□□ -1.75
GCD10	YNL062C	SQT1	P35184	431 aa		4.14	□□□□□ -1.75
GCD10	YNL062C	RDH54	P38086	958 aa		4.14	□□□□□ -1.75
GCD10	YNL062C	CIC1	P38779	376 aa	Known RBP	4.14	□□□□□ -1.75
GCD10	YNL062C	PEX28	P38848	579 aa		4.14	□□□□□ -1.75
GCD10	YNL062C	GCV2	P49095	1034 aa		4.14	□□□□□ -1.75
GCD10	YNL062C	PTC5	Q12511	572 aa		4.14	□□□□□ -1.75
GCD10	YNL062C	FRT1	Q99332	602 aa		4.14	□□□□□ -1.75
GCD10	YNL062C	AFG2	P32794	780 aa		4.13	□□□□□ -1.75
GCD10	YNL062C	UGA4	P32837	571 aa		4.13	□□□□□ -1.75
GCD10	YNL062C	SSF1	P38789	453 aa	Predicted RBP	4.13	□□□□□ -1.75
GCD10	YNL062C	LGE1	Q02796	332 aa	Known RBP	4.13	□□□□□ -1.75
GCD10	YNL062C	NUT2	Q06213	157 aa		4.13	□□□□□ -1.75
GCD10	YNL062C	GPI13	Q07830	1017 aa		4.13	□□□□□ -1.75
GCD10	YNL062C	NOP12	Q08208	459 aa	Known RBP	4.13	□□□□□ -1.75
GCD10	YNL062C	RPN3	P40016	523 aa	Known RBP	4.12	□□□□□ -1.75
GCD10	YNL062C	APL1	P27351	700 aa		4.12	□□□□□ -1.75
GCD10	YNL062C	PRP40	P33203	583 aa	Known RBP	4.12	□□□□□ -1.75
GCD10	YNL062C	TCB3	Q03640	1545 aa	Known RBP	4.11	□□□□□ -1.75
GCD10	YNL062C	HRR25	P29295	494 aa	Known RBP	4.11	□□□□□ -1.75
GCD10	YNL062C	YHL050C	P38721	697 aa		4.11	□□□□□ -1.75
GCD10	YNL062C	YHR219W	P38900	624 aa		4.11	□□□□□ -1.75
GCD10	YNL062C	PLB1	P39105	664 aa		4.11	□□□□□ -1.75
GCD10	YNL062C	SIP5	P40210	489 aa	Known RBP	4.11	□□□□□ -1.75
GCD10	YNL062C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
GCD10	YNL062C	ULP1	Q02724	621 aa		4.11	□□□□□ -1.75
GCD10	YNL062C	EST2	Q06163	884 aa		4.11	□□□□□ -1.75
GCD10	YNL062C	TY1B-DR4	Q07793	1604 aa		4.11	□□□□□ -1.75
GCD10	YNL062C	AIM39	Q08223	395 aa		4.11	□□□□□ -1.75
GCD10	YNL062C	SVS1	Q12254	260 aa		4.11	□□□□□ -1.75
GCD10	YNL062C	SIZ1	Q04195	904 aa		4.1	□□□□□ -1.75
GCD10	YNL062C	HEM13	P11353	328 aa	Known RBP	4.09	□□□□□ -1.75
GCD10	YNL062C	ALG3	P38179	458 aa		4.09	□□□□□ -1.75
GCD10	YNL062C	YFL054C	P43549	646 aa		4.09	□□□□□ -1.75
GCD10	YNL062C	IOC3	P43596	787 aa		4.09	□□□□□ -1.75
GCD10	YNL062C	YGL140C	P53120	1219 aa		4.09	□□□□□ -1.75
GCD10	YNL062C	YPL260W	Q08977	551 aa		4.09	□□□□□ -1.75
GCD10	YNL062C	KAR2	P16474	682 aa	Known RBP	4.08	□□□□□ -1.76
GCD10	YNL062C	SWR1	Q05471	1514 aa		4.08	□□□□□ -1.76
GCD10	YNL062C	CUE2	P36075	443 aa	Known RBP	4.07	□□□□□ -1.76
GCD10	YNL062C	STM1	P39015	273 aa	Known RBP	4.07	□□□□□ -1.76
GCD10	YNL062C	DED1	P06634	604 aa	Known RBP	4.06	□□□□□ -1.76
GCD10	YNL062C	PFK1	P16861	987 aa	Known RBP	4.06	□□□□□ -1.76
GCD10	YNL062C	DAK2	P43550	591 aa		4.06	□□□□□ -1.76
GCD10	YNL062C	PPX1	P38698	397 aa		4.05	□□□□□ -1.76
GCD10	YNL062C	QRI1	P43123	477 aa	Known RBP	4.05	□□□□□ -1.76
GCD10	YNL062C	STU2	P46675	888 aa		4.05	□□□□□ -1.76
GCD10	YNL062C	DAL4	Q04895	635 aa		4.05	□□□□□ -1.76
GCD10	YNL062C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
GCD10	YNL062C	MSC2	Q03455	724 aa		4.04	□□□□□ -1.76
GCD10	YNL062C	MSC6	Q08818	692 aa	Known RBP	4.04	□□□□□ -1.76
GCD10	YNL062C	WHI5	Q12416	295 aa		4.04	□□□□□ -1.76
GCD10	YNL062C	MET4	P32389	672 aa		4.04	□□□□□ -1.76
GCD10	YNL062C	SEC23	P15303	768 aa	Known RBP	4.03	□□□□□ -1.76
GCD10	YNL062C	PEP7	P32609	515 aa		4.03	□□□□□ -1.76
GCD10	YNL062C	IPL1	P38991	367 aa		4.03	□□□□□ -1.76
GCD10	YNL062C	THI12	P42883	340 aa		4.03	□□□□□ -1.76
GCD10	YNL062C	THI5	P43534	340 aa		4.03	□□□□□ -1.76
GCD10	YNL062C	THI11	P47183	340 aa		4.03	□□□□□ -1.76
GCD10	YNL062C	EXG2	P52911	562 aa		4.03	□□□□□ -1.76
GCD10	YNL062C	SEN54	Q02825	467 aa	Predicted RBP	4.03	□□□□□ -1.76
GCD10	YNL062C	THI13	Q07748	340 aa		4.03	□□□□□ -1.76
GCD10	YNL062C	TPO1	Q07824	586 aa		4.03	□□□□□ -1.76
GCD10	YNL062C	DNA2	P38859	1522 aa		4.02	□□□□□ -1.77
GCD10	YNL062C	PHO4	P07270	312 aa	Known RBP	4.02	□□□□□ -1.77
GCD10	YNL062C	SEC20	P28791	383 aa		4.02	□□□□□ -1.77
GCD10	YNL062C	MND2	P40577	368 aa		4.02	□□□□□ -1.77
GCD10	YNL062C	TMN2	Q04562	672 aa		4.02	□□□□□ -1.77
GCD10	YNL062C	HSL1	P34244	1518 aa		4.02	□□□□□ -1.77
GCD10	YNL062C	SPT6	P23615	1451 aa	Known RBP	4.01	□□□□□ -1.77
GCD10	YNL062C	GCD6	P32501	712 aa	Known RBP	4.01	□□□□□ -1.77
GCD10	YNL062C	YML020W	Q03722	664 aa		4.01	□□□□□ -1.77
GCD10	YNL062C	SSN2	P38931	1420 aa		4	□□□□□ -1.77
GCD10	YNL062C	MET12	P46151	657 aa		4	□□□□□ -1.77
GCD10	YNL062C	ADI1	Q03677	179 aa		4	□□□□□ -1.77
GCD10	YNL062C	ATG13	Q06628	738 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms