RNA–Protein interactions for RNA: YMR016C

SOK2, Transcript of Nuclear protein that negatively regulates pseudohyphal differentiation, yeastyeast

Gene SOK2, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK2YMR016C PEX13P80667 386 aa3.22□□□□□ -1.89
SOK2YMR016C SQT1P35184 431 aa3.21□□□□□ -1.9
SOK2YMR016C HEM13P11353 328 aaKnown RBP3.2□□□□□ -1.9
SOK2YMR016C DUT1P33317 147 aa3.2□□□□□ -1.9
SOK2YMR016C LAM1P38851 1228 aa3.2□□□□□ -1.9
SOK2YMR016C RPS26AP39938 119 aaKnown RBP3.2□□□□□ -1.9
SOK2YMR016C RPS26BP39939 119 aaKnown RBP3.2□□□□□ -1.9
SOK2YMR016C GCN5Q03330 439 aa3.2□□□□□ -1.9
SOK2YMR016C PUF4P25339 888 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
SOK2YMR016C GCD6P32501 712 aaKnown RBP3.2□□□□□ -1.9
SOK2YMR016C ADD66P36040 267 aa3.2□□□□□ -1.9
SOK2YMR016C MEF2P39677 819 aa3.2□□□□□ -1.9
SOK2YMR016C SEC26P41810 973 aaKnown RBP3.2□□□□□ -1.9
SOK2YMR016C YNR063WP53749 607 aa3.2□□□□□ -1.9
SOK2YMR016C VPS16Q03308 798 aa3.2□□□□□ -1.9
SOK2YMR016C PRP40P33203 583 aaKnown RBP3.19□□□□□ -1.9
SOK2YMR016C NOP7P53261 605 aaKnown RBP3.19□□□□□ -1.9
SOK2YMR016C DOM34P33309 386 aa3.19□□□□□ -1.9
SOK2YMR016C PIC2P40035 300 aa3.19□□□□□ -1.9
SOK2YMR016C YGR122WP53272 402 aa3.19□□□□□ -1.9
SOK2YMR016C TNA1P53322 534 aa3.19□□□□□ -1.9
SOK2YMR016C RSB1Q08417 382 aa3.19□□□□□ -1.9
SOK2YMR016C DNF1P32660 1571 aa3.19□□□□□ -1.9
SOK2YMR016C TRM2P33753 639 aa3.18□□□□□ -1.9
SOK2YMR016C VPS35P34110 944 aa3.18□□□□□ -1.9
SOK2YMR016C IOC3P43596 787 aa3.18□□□□□ -1.9
SOK2YMR016C PIN2Q12057 282 aa3.18□□□□□ -1.9
SOK2YMR016C PEX28P38848 579 aa3.18□□□□□ -1.9
SOK2YMR016C PIK1P39104 1066 aa3.18□□□□□ -1.9
SOK2YMR016C GNP1P48813 663 aa3.18□□□□□ -1.9
SOK2YMR016C RAD2P07276 1031 aa3.17□□□□□ -1.9
SOK2YMR016C BAP2P38084 609 aa3.17□□□□□ -1.9
SOK2YMR016C RDH54P38086 958 aa3.17□□□□□ -1.9
SOK2YMR016C ULP1Q02724 621 aa3.17□□□□□ -1.9
SOK2YMR016C HOS3Q02959 697 aaKnown RBP3.17□□□□□ -1.9
SOK2YMR016C SVF1Q05515 481 aa3.17□□□□□ -1.9
SOK2YMR016C JIP5Q06214 492 aaPredicted RBP3.17□□□□□ -1.9
SOK2YMR016C SSF2Q12153 453 aaPredicted RBP3.17□□□□□ -1.9
SOK2YMR016C REV3P14284 1504 aa3.17□□□□□ -1.9
SOK2YMR016C CYC1P00044 109 aaPredicted RBP3.17□□□□□ -1.9
SOK2YMR016C PUS9Q12069 462 aa3.17□□□□□ -1.9
SOK2YMR016C YTA7P40340 1379 aa3.17□□□□□ -1.9
SOK2YMR016C STE11P23561 717 aa3.16□□□□□ -1.9
SOK2YMR016C MGE1P38523 228 aa3.16□□□□□ -1.9
SOK2YMR016C RPN3P40016 523 aaKnown RBP3.16□□□□□ -1.9
SOK2YMR016C ALD6P54115 500 aaKnown RBP3.16□□□□□ -1.9
SOK2YMR016C IRC20Q06554 1556 aa3.16□□□□□ -1.9
SOK2YMR016C KIP1P28742 1111 aa3.16□□□□□ -1.9
SOK2YMR016C VAC8P39968 578 aa3.16□□□□□ -1.9
SOK2YMR016C MSE1P48525 536 aa3.16□□□□□ -1.9
SOK2YMR016C YPL109CQ02981 657 aa3.16□□□□□ -1.9
SOK2YMR016C RSM24Q03976 319 aa3.16□□□□□ -1.9
SOK2YMR016C DAL4Q04895 635 aa3.16□□□□□ -1.9
SOK2YMR016C EST2Q06163 884 aa3.16□□□□□ -1.9
SOK2YMR016C OXR1Q08952 273 aa3.16□□□□□ -1.9
SOK2YMR016C YKL069WP36088 180 aa3.15□□□□□ -1.9
SOK2YMR016C HXT13P39924 564 aa3.15□□□□□ -1.9
SOK2YMR016C YGL140CP53120 1219 aa3.15□□□□□ -1.9
SOK2YMR016C PBP1P53297 722 aaKnown RBP3.15□□□□□ -1.9
SOK2YMR016C HXT17P53631 564 aa3.15□□□□□ -1.9
SOK2YMR016C HXT15P54854 567 aa3.15□□□□□ -1.9
SOK2YMR016C RXT3Q07458 294 aa3.15□□□□□ -1.9
SOK2YMR016C YPL260WQ08977 551 aa3.15□□□□□ -1.9
SOK2YMR016C PTC5Q12511 572 aa3.15□□□□□ -1.9
SOK2YMR016C TAF13P11747 167 aa3.15□□□□□ -1.91
SOK2YMR016C ADI1Q03677 179 aa3.15□□□□□ -1.91
SOK2YMR016C DUS4Q06063 367 aa3.15□□□□□ -1.91
SOK2YMR016C RCL1Q08096 367 aaPredicted RBP3.15□□□□□ -1.91
SOK2YMR016C SEC23P15303 768 aaKnown RBP3.14□□□□□ -1.91
SOK2YMR016C PRE9P23638 258 aaKnown RBP3.14□□□□□ -1.91
SOK2YMR016C HCM1P25364 564 aa3.14□□□□□ -1.91
SOK2YMR016C MNN10P50108 393 aaKnown RBP3.14□□□□□ -1.91
SOK2YMR016C YGR053CP53234 283 aa3.14□□□□□ -1.91
SOK2YMR016C ROT1Q03691 256 aa3.14□□□□□ -1.91
SOK2YMR016C BUD6P41697 788 aa3.14□□□□□ -1.91
SOK2YMR016C FAA4P47912 694 aaKnown RBP3.14□□□□□ -1.91
SOK2YMR016C EEB1Q02891 456 aa3.14□□□□□ -1.91
SOK2YMR016C ACK1Q07622 623 aaPredicted RBP3.14□□□□□ -1.91
SOK2YMR016C GCR1P07261 785 aa3.13□□□□□ -1.91
SOK2YMR016C PMI40P29952 429 aaKnown RBP3.13□□□□□ -1.91
SOK2YMR016C RFC5P38251 354 aa3.13□□□□□ -1.91
SOK2YMR016C MYO2P19524 1574 aaKnown RBP3.12□□□□□ -1.91
SOK2YMR016C SNF5P18480 905 aa3.12□□□□□ -1.91
SOK2YMR016C CDC20P26309 610 aa3.12□□□□□ -1.91
SOK2YMR016C AFG2P32794 780 aa3.12□□□□□ -1.91
SOK2YMR016C YPT53P36019 220 aa3.12□□□□□ -1.91
SOK2YMR016C GPB2P39717 880 aa3.12□□□□□ -1.91
SOK2YMR016C MDS3P53094 1487 aa3.12□□□□□ -1.91
SOK2YMR016C KIN2P13186 1147 aaKnown RBP3.12□□□□□ -1.91
SOK2YMR016C CDC34P14682 295 aa3.12□□□□□ -1.91
SOK2YMR016C MCM6P53091 1017 aaKnown RBP3.12□□□□□ -1.91
SOK2YMR016C RMD1Q03441 430 aa3.12□□□□□ -1.91
SOK2YMR016C PPM2Q08282 695 aa3.12□□□□□ -1.91
SOK2YMR016C GPB1Q08886 897 aa3.12□□□□□ -1.91
SOK2YMR016C SPO21Q12411 609 aa3.12□□□□□ -1.91
SOK2YMR016C GAL10P04397 699 aa3.11□□□□□ -1.91
SOK2YMR016C CMP2P14747 604 aa3.11□□□□□ -1.91
SOK2YMR016C STE5P32917 917 aa3.11□□□□□ -1.91
SOK2YMR016C ALG3P38179 458 aa3.11□□□□□ -1.91
SOK2YMR016C YHR020WP38708 688 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms