RNA–Protein interactions for RNA: YGR169C

PUS6, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene PUS6, Length 1,215 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUS6YGR169C YOR296WQ08748 1289 aa6.05□□□□□ -1.44
PUS6YGR169C SNU66Q12420 587 aaPredicted RBP6.05□□□□□ -1.44
PUS6YGR169C YNG2P38806 282 aaKnown RBP6.04□□□□□ -1.44
PUS6YGR169C SHC1P39000 512 aa6.04□□□□□ -1.44
PUS6YGR169C RGD2P43556 714 aa6.04□□□□□ -1.44
PUS6YGR169C SQS1P53866 767 aaKnown RBP6.04□□□□□ -1.44
PUS6YGR169C MSC6Q08818 692 aaKnown RBP6.04□□□□□ -1.44
PUS6YGR169C TOP1P04786 769 aa6.03□□□□□ -1.44
PUS6YGR169C SMC1P32908 1225 aa6.03□□□□□ -1.44
PUS6YGR169C ISW1P38144 1129 aa6.03□□□□□ -1.44
PUS6YGR169C APM2P38700 605 aa6.03□□□□□ -1.44
PUS6YGR169C RAD55P38953 406 aa6.03□□□□□ -1.44
PUS6YGR169C CCT8P47079 568 aaKnown RBP6.03□□□□□ -1.44
PUS6YGR169C UFD2P54860 961 aa6.03□□□□□ -1.44
PUS6YGR169C YPR053CQ6Q5F3 151 aa6.03□□□□□ -1.44
PUS6YGR169C SAC3P46674 1301 aa6.02□□□□□ -1.45
PUS6YGR169C RET1P22276 1149 aaKnown RBP6.02□□□□□ -1.45
PUS6YGR169C FPS1P23900 669 aa6.02□□□□□ -1.45
PUS6YGR169C KRE2P27809 442 aa6.02□□□□□ -1.45
PUS6YGR169C NCL1P38205 684 aaKnown RBP6.02□□□□□ -1.45
PUS6YGR169C NUG1P40010 520 aaKnown RBP6.02□□□□□ -1.45
PUS6YGR169C UBX2Q04228 584 aa6.02□□□□□ -1.45
PUS6YGR169C TDA6Q06466 467 aa6.02□□□□□ -1.45
PUS6YGR169C UTP10P42945 1769 aaKnown RBP6.01□□□□□ -1.45
PUS6YGR169C FUN12P39730 1002 aaKnown RBP6.01□□□□□ -1.45
PUS6YGR169C YNR014WP53719 212 aa6.01□□□□□ -1.45
PUS6YGR169C MNL2Q12205 849 aa6.01□□□□□ -1.45
PUS6YGR169C TIF6Q12522 245 aaKnown RBP6.01□□□□□ -1.45
PUS6YGR169C MSM1P22438 575 aa6□□□□□ -1.45
PUS6YGR169C SEC20P28791 383 aa6□□□□□ -1.45
PUS6YGR169C MGM1P32266 881 aa6□□□□□ -1.45
PUS6YGR169C MSC7P38694 644 aa6□□□□□ -1.45
PUS6YGR169C FPR3P38911 411 aaKnown RBP6□□□□□ -1.45
PUS6YGR169C NTA1P40354 457 aa6□□□□□ -1.45
PUS6YGR169C POL32P47110 350 aa6□□□□□ -1.45
PUS6YGR169C YMR187CQ03236 431 aa6□□□□□ -1.45
PUS6YGR169C THI3Q07471 609 aa6□□□□□ -1.45
PUS6YGR169C GPI13Q07830 1017 aa6□□□□□ -1.45
PUS6YGR169C WHI5Q12416 295 aa6□□□□□ -1.45
PUS6YGR169C RPP1AP05318 106 aaPredicted RBP5.99□□□□□ -1.45
PUS6YGR169C GCD7P32502 381 aaPredicted RBP5.99□□□□□ -1.45
PUS6YGR169C PSY2P40164 858 aa5.99□□□□□ -1.45
PUS6YGR169C SPO1P53541 631 aa5.99□□□□□ -1.45
PUS6YGR169C EMG1Q06287 252 aaKnown RBP5.99□□□□□ -1.45
PUS6YGR169C GPM1P00950 247 aaKnown RBP5.98□□□□□ -1.45
PUS6YGR169C IRS4P36115 615 aaKnown RBP5.98□□□□□ -1.45
PUS6YGR169C PPX1P38698 397 aa5.98□□□□□ -1.45
PUS6YGR169C SPL2P38839 148 aa5.98□□□□□ -1.45
PUS6YGR169C AIM46P38885 310 aa5.98□□□□□ -1.45
PUS6YGR169C YIL165CP40446 119 aa5.98□□□□□ -1.45
PUS6YGR169C RPT4P53549 437 aaKnown RBP5.98□□□□□ -1.45
PUS6YGR169C YNL011CP53980 444 aa5.98□□□□□ -1.45
PUS6YGR169C TY1A-DR2Q03964 440 aaKnown RBP5.98□□□□□ -1.45
PUS6YGR169C PSF3Q12146 194 aa5.98□□□□□ -1.45
PUS6YGR169C NCB2Q92317 146 aa5.98□□□□□ -1.45
PUS6YGR169C SEC18P18759 758 aaKnown RBP5.97□□□□□ -1.45
PUS6YGR169C CRF1Q04930 467 aa5.97□□□□□ -1.45
PUS6YGR169C RRG1Q12167 365 aaPredicted RBP5.97□□□□□ -1.45
PUS6YGR169C ADR1P07248 1323 aa5.97□□□□□ -1.45
PUS6YGR169C SBP1P10080 294 aaKnown RBP5.96□□□□□ -1.46
PUS6YGR169C MET4P32389 672 aa5.96□□□□□ -1.46
PUS6YGR169C SKN7P38889 622 aa5.96□□□□□ -1.46
PUS6YGR169C HEH2Q03281 663 aa5.96□□□□□ -1.46
PUS6YGR169C PIF1P07271 859 aa5.95□□□□□ -1.46
PUS6YGR169C IDI1P15496 288 aa5.95□□□□□ -1.46
PUS6YGR169C LCB1P25045 558 aaKnown RBP5.95□□□□□ -1.46
PUS6YGR169C HEM3P28789 327 aa5.95□□□□□ -1.46
PUS6YGR169C PRK1P40494 810 aa5.95□□□□□ -1.46
PUS6YGR169C CDC55Q00362 526 aa5.95□□□□□ -1.46
PUS6YGR169C RSC4Q02206 625 aa5.95□□□□□ -1.46
PUS6YGR169C IRC4Q03036 179 aa5.95□□□□□ -1.46
PUS6YGR169C PRP42Q03776 544 aaKnown RBP5.95□□□□□ -1.46
PUS6YGR169C PMD1P32634 1753 aa5.95□□□□□ -1.46
PUS6YGR169C NMD2P38798 1089 aaKnown RBP5.94□□□□□ -1.46
PUS6YGR169C PPT1P53043 513 aa5.94□□□□□ -1.46
PUS6YGR169C GAS5Q08193 484 aa5.94□□□□□ -1.46
PUS6YGR169C RRI2Q12348 645 aa5.94□□□□□ -1.46
PUS6YGR169C POM152P39685 1337 aa5.94□□□□□ -1.46
PUS6YGR169C MRP10O75012 95 aa5.93□□□□□ -1.46
PUS6YGR169C THS1P04801 734 aaKnown RBP5.93□□□□□ -1.46
PUS6YGR169C AFG2P32794 780 aa5.93□□□□□ -1.46
PUS6YGR169C MCX1P38323 520 aaPredicted RBP5.93□□□□□ -1.46
PUS6YGR169C GSM1P42950 618 aa5.93□□□□□ -1.46
PUS6YGR169C YFH7P43591 353 aa5.93□□□□□ -1.46
PUS6YGR169C YGL242CP53066 181 aa5.93□□□□□ -1.46
PUS6YGR169C YGR117CP53270 476 aa5.93□□□□□ -1.46
PUS6YGR169C NRD1P53617 575 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46not detected
PUS6YGR169C TRM44Q02648 567 aaKnown RBP5.93□□□□□ -1.46
PUS6YGR169C TIM50Q02776 476 aa5.93□□□□□ -1.46
PUS6YGR169C BSC2Q05611 235 aa5.93□□□□□ -1.46
PUS6YGR169C WRS1Q12109 432 aaKnown RBP5.93□□□□□ -1.46
PUS6YGR169C FET4P40988 552 aa5.92□□□□□ -1.46
PUS6YGR169C MLC1P53141 149 aa5.92□□□□□ -1.46
PUS6YGR169C YNL193WP53870 558 aa5.92□□□□□ -1.46
PUS6YGR169C ECM16Q04217 1267 aaKnown RBP5.92□□□□□ -1.46
PUS6YGR169C ACK1Q07622 623 aaPredicted RBP5.92□□□□□ -1.46
PUS6YGR169C PYC2P32327 1180 aaKnown RBP5.91□□□□□ -1.46
PUS6YGR169C RFC1P38630 861 aaKnown RBP5.91□□□□□ -1.46
PUS6YGR169C CTR9P89105 1077 aa5.91□□□□□ -1.46
PUS6YGR169C RPN7Q06103 429 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms