RNA–Protein interactions for RNA: YGR112W

SHY1, Transcript of Mitochondrial inner membrane protein required for complex IV assembly, yeast

Gene SHY1, Length 1,170 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHY1	YGR112W	CCC2	P38995	1004 aa		10.42	□□□□□ -0.74
SHY1	YGR112W	SEC9	P40357	651 aa		10.42	□□□□□ -0.74
SHY1	YGR112W	CRF1	Q04930	467 aa		10.42	□□□□□ -0.74
SHY1	YGR112W	YAP7	Q08182	245 aa		10.42	□□□□□ -0.74
SHY1	YGR112W	YPL216W	Q08964	1102 aa		10.42	□□□□□ -0.74
SHY1	YGR112W	RRP6	Q12149	733 aa	Known RBP	10.42	□□□□□ -0.74
SHY1	YGR112W	MCM16	Q12262	181 aa		10.42	□□□□□ -0.74
SHY1	YGR112W	YOL098C	Q12496	1037 aa		10.42	□□□□□ -0.74
SHY1	YGR112W	CKA2	P19454	339 aa		10.41	□□□□□ -0.74
SHY1	YGR112W	STO1	P34160	861 aa	Known RBP	10.41	□□□□□ -0.74
SHY1	YGR112W	ORC6	P38826	435 aa		10.41	□□□□□ -0.74
SHY1	YGR112W	CBK1	P53894	756 aa		10.41	□□□□□ -0.74
SHY1	YGR112W	AAD16	Q02895	342 aa		10.41	□□□□□ -0.74
SHY1	YGR112W	YLR287C	Q05881	355 aa		10.41	□□□□□ -0.74
SHY1	YGR112W	PMA1	P05030	918 aa	Known RBP	10.4	□□□□□ -0.74
SHY1	YGR112W	SEC23	P15303	768 aa	Known RBP	10.4	□□□□□ -0.74
SHY1	YGR112W	OM45	P16547	393 aa		10.4	□□□□□ -0.74
SHY1	YGR112W	ISY1	P21374	235 aa	Predicted RBP	10.4	□□□□□ -0.74
SHY1	YGR112W	GSY1	P23337	708 aa		10.4	□□□□□ -0.74
SHY1	YGR112W	ATG3	P40344	310 aa		10.4	□□□□□ -0.74
SHY1	YGR112W	PRP31	P49704	494 aa	Predicted RBP	10.4	□□□□□ -0.74
SHY1	YGR112W	HFM1	P51979	1187 aa		10.4	□□□□□ -0.74
SHY1	YGR112W	LSB1	P53281	241 aa		10.4	□□□□□ -0.74
SHY1	YGR112W	YGR273C	P53329	174 aa		10.4	□□□□□ -0.74
SHY1	YGR112W	ERG5	P54781	538 aa		10.4	□□□□□ -0.74
SHY1	YGR112W	AIM33	Q04516	312 aa		10.4	□□□□□ -0.74
SHY1	YGR112W	LAP2	Q10740	671 aa		10.4	□□□□□ -0.74
SHY1	YGR112W	SMC6	Q12749	1114 aa		10.4	□□□□□ -0.74
SHY1	YGR112W	YEL076C-A	P0CX16	216 aa		10.39	□□□□□ -0.75
SHY1	YGR112W	YLR464W	P0CX17	216 aa		10.39	□□□□□ -0.75
SHY1	YGR112W	SPO12	P17123	173 aa		10.39	□□□□□ -0.75
SHY1	YGR112W	STE11	P23561	717 aa		10.39	□□□□□ -0.75
SHY1	YGR112W	SRO9	P25567	434 aa	Known RBP	10.39	□□□□□ -0.75
SHY1	YGR112W	STV1	P37296	890 aa		10.39	□□□□□ -0.75
SHY1	YGR112W	GAA1	P39012	614 aa		10.39	□□□□□ -0.75
SHY1	YGR112W	YEL076C	P39971	216 aa		10.39	□□□□□ -0.75
SHY1	YGR112W	VFA1	P40080	203 aa		10.39	□□□□□ -0.75
SHY1	YGR112W	SHQ1	P40486	507 aa	Predicted RBP	10.39	□□□□□ -0.75
SHY1	YGR112W	SNU71	P53207	620 aa	Known RBP	10.39	□□□□□ -0.75
SHY1	YGR112W	UTP4	Q06679	776 aa	Known RBP	10.39	□□□□□ -0.75
SHY1	YGR112W	CWC2	Q12046	339 aa	Predicted RBP	10.39	□□□□□ -0.75
SHY1	YGR112W	MSM1	P22438	575 aa		10.38	□□□□□ -0.75
SHY1	YGR112W	PWP2	P25635	923 aa	Known RBP	10.38	□□□□□ -0.75
SHY1	YGR112W	PAN5	P38787	379 aa		10.38	□□□□□ -0.75
SHY1	YGR112W	NDC80	P40460	691 aa		10.38	□□□□□ -0.75
SHY1	YGR112W	TRM44	Q02648	567 aa	Known RBP	10.38	□□□□□ -0.75
SHY1	YGR112W	UME1	Q03010	460 aa		10.38	□□□□□ -0.75
SHY1	YGR112W	BUL2	Q03758	920 aa	Known RBP	10.38	□□□□□ -0.75
SHY1	YGR112W	SML1	Q04964	104 aa		10.38	□□□□□ -0.75
SHY1	YGR112W	YLH47	Q06493	454 aa		10.38	□□□□□ -0.75
SHY1	YGR112W	OXR1	Q08952	273 aa		10.38	□□□□□ -0.75
SHY1	YGR112W	TUB2	P02557	457 aa	Known RBP	10.37	□□□□□ -0.75
SHY1	YGR112W	RPS9B	P05755	195 aa	Known RBP	10.37	□□□□□ -0.75
SHY1	YGR112W	MTF2	P10849	440 aa		10.37	□□□□□ -0.75
SHY1	YGR112W	RAD53	P22216	821 aa		10.37	□□□□□ -0.75
SHY1	YGR112W	NDT80	P38830	627 aa		10.37	□□□□□ -0.75
SHY1	YGR112W	KEL1	P38853	1164 aa	Known RBP	10.37	□□□□□ -0.75
SHY1	YGR112W	VPS4	P52917	437 aa		10.37	□□□□□ -0.75
SHY1	YGR112W	SPO75	Q07798	868 aa		10.37	□□□□□ -0.75
SHY1	YGR112W	NEW1	Q08972	1196 aa	Known RBP	10.37	□□□□□ -0.75
SHY1	YGR112W	DPB3	P27344	201 aa		10.36	□□□□□ -0.75
SHY1	YGR112W	RAM2	P29703	316 aa		10.36	□□□□□ -0.75
SHY1	YGR112W	PPS1	P38148	807 aa		10.36	□□□□□ -0.75
SHY1	YGR112W	MCX1	P38323	520 aa	Predicted RBP	10.36	□□□□□ -0.75
SHY1	YGR112W	REI1	P38344	393 aa	Predicted RBP	10.36	□□□□□ -0.75
SHY1	YGR112W	SUL1	P38359	859 aa		10.36	□□□□□ -0.75
SHY1	YGR112W	EMP47	P43555	445 aa		10.36	□□□□□ -0.75
SHY1	YGR112W	ROG3	P43602	733 aa		10.36	□□□□□ -0.75
SHY1	YGR112W	BOP3	P53958	396 aa		10.36	□□□□□ -0.75
SHY1	YGR112W	MFM1	Q02783	413 aa		10.36	□□□□□ -0.75
SHY1	YGR112W	UTP5	Q04177	643 aa	Known RBP	10.36	□□□□□ -0.75
SHY1	YGR112W	RBA50	Q04418	439 aa		10.36	□□□□□ -0.75
SHY1	YGR112W	ATG20	Q07528	640 aa		10.36	□□□□□ -0.75
SHY1	YGR112W	ILV1	P00927	576 aa	Known RBP	10.35	□□□□□ -0.75
SHY1	YGR112W	TIF4631	P39935	952 aa	Known RBP	10.35	□□□□□ -0.75
SHY1	YGR112W	EFM4	P40516	257 aa		10.35	□□□□□ -0.75
SHY1	YGR112W	YAP5	P40574	245 aa		10.35	□□□□□ -0.75
SHY1	YGR112W	TOS3	P43637	560 aa		10.35	□□□□□ -0.75
SHY1	YGR112W	GUP1	P53154	560 aa		10.35	□□□□□ -0.75
SHY1	YGR112W	RRB1	Q04225	511 aa	Known RBP	10.35	□□□□□ -0.75
SHY1	YGR112W	VAC14	Q06708	880 aa		10.35	□□□□□ -0.75
SHY1	YGR112W	NOP14	Q99207	810 aa	Known RBP	10.35	□□□□□ -0.75
SHY1	YGR112W	PPR1	P07272	904 aa	Predicted RBP	10.34	□□□□□ -0.75
SHY1	YGR112W	GAP1	P19145	602 aa	Predicted RBP	10.34	□□□□□ -0.75
SHY1	YGR112W	RAD57	P25301	460 aa		10.34	□□□□□ -0.75
SHY1	YGR112W	RPC53	P25441	422 aa		10.34	□□□□□ -0.75
SHY1	YGR112W	PDC6	P26263	563 aa	Known RBP	10.34	□□□□□ -0.75
SHY1	YGR112W	SPT21	P35209	758 aa		10.34	□□□□□ -0.75
SHY1	YGR112W	ISW1	P38144	1129 aa		10.34	□□□□□ -0.75
SHY1	YGR112W	PIH1	P38768	344 aa		10.34	□□□□□ -0.75
SHY1	YGR112W	BIM1	P40013	344 aa		10.34	□□□□□ -0.75
SHY1	YGR112W	IES1	P43579	692 aa		10.34	□□□□□ -0.75
SHY1	YGR112W	FMS1	P50264	508 aa		10.34	□□□□□ -0.75
SHY1	YGR112W	PLP2	Q12017	286 aa		10.34	□□□□□ -0.75
SHY1	YGR112W	KRS1	P15180	591 aa	Known RBP	10.33	□□□□□ -0.76
SHY1	YGR112W	SIP3	P38717	1229 aa		10.33	□□□□□ -0.76
SHY1	YGR112W	CIN4	P39110	191 aa		10.33	□□□□□ -0.76
SHY1	YGR112W	NUP82	P40368	713 aa		10.33	□□□□□ -0.76
SHY1	YGR112W	HUL4	P40985	892 aa		10.33	□□□□□ -0.76
SHY1	YGR112W	SOL4	P53315	255 aa		10.33	□□□□□ -0.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms