RNA–Protein interactions for RNA: YGL078C

DBP3, Transcript of RNA-Dependent ATPase, member of DExD/H-box family, yeast

Gene DBP3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP3	YGL078C	NNK1	P36003	928 aa		4.77	□□□□□ -1.65
DBP3	YGL078C	VPS24	P36095	224 aa	Known RBP	4.77	□□□□□ -1.65
DBP3	YGL078C	SAF1	P38352	637 aa		4.77	□□□□□ -1.65
DBP3	YGL078C	CCT8	P47079	568 aa	Known RBP	4.77	□□□□□ -1.65
DBP3	YGL078C	PLP2	Q12017	286 aa		4.77	□□□□□ -1.65
DBP3	YGL078C	PIN2	Q12057	282 aa		4.77	□□□□□ -1.65
DBP3	YGL078C	NFS1	P25374	497 aa		4.76	□□□□□ -1.65
DBP3	YGL078C	SMY2	P32909	740 aa	Known RBP	4.76	□□□□□ -1.65
DBP3	YGL078C	MSH4	P40965	878 aa	Predicted RBP	4.76	□□□□□ -1.65
DBP3	YGL078C	LSB3	P43603	459 aa	Known RBP	4.76	□□□□□ -1.65
DBP3	YGL078C	ROD1	Q02805	837 aa		4.76	□□□□□ -1.65
DBP3	YGL078C	VPS16	Q03308	798 aa		4.76	□□□□□ -1.65
DBP3	YGL078C	RPS4A	P0CX35	261 aa	Known RBP	4.75	□□□□□ -1.65
DBP3	YGL078C	RPS4B	P0CX36	261 aa	Known RBP	4.75	□□□□□ -1.65
DBP3	YGL078C	CHS2	P14180	963 aa		4.75	□□□□□ -1.65
DBP3	YGL078C	VPS53	P47061	822 aa		4.75	□□□□□ -1.65
DBP3	YGL078C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
DBP3	YGL078C	TSC11	P40061	1430 aa		4.75	□□□□□ -1.65
DBP3	YGL078C	RET1	P22276	1149 aa	Known RBP	4.74	□□□□□ -1.65
DBP3	YGL078C	MKK2	P32491	506 aa		4.74	□□□□□ -1.65
DBP3	YGL078C	KAE1	P36132	386 aa		4.74	□□□□□ -1.65
DBP3	YGL078C	MMM1	P41800	426 aa		4.74	□□□□□ -1.65
DBP3	YGL078C	GNP1	P48813	663 aa		4.74	□□□□□ -1.65
DBP3	YGL078C	GDE1	Q02979	1223 aa		4.74	□□□□□ -1.65
DBP3	YGL078C	CDC45	Q08032	650 aa		4.74	□□□□□ -1.65
DBP3	YGL078C	NUP159	P40477	1460 aa		4.74	□□□□□ -1.65
DBP3	YGL078C	RPP0	P05317	312 aa	Known RBP	4.74	□□□□□ -1.65
DBP3	YGL078C	PCT1	P13259	424 aa		4.74	□□□□□ -1.65
DBP3	YGL078C	SYP1	P25623	870 aa	Known RBP	4.74	□□□□□ -1.65
DBP3	YGL078C	PGM1	P33401	570 aa	Known RBP	4.74	□□□□□ -1.65
DBP3	YGL078C	HXT13	P39924	564 aa		4.74	□□□□□ -1.65
DBP3	YGL078C	RAD26	P40352	1085 aa		4.74	□□□□□ -1.65
DBP3	YGL078C	HXT17	P53631	564 aa		4.74	□□□□□ -1.65
DBP3	YGL078C	HXT15	P54854	567 aa		4.74	□□□□□ -1.65
DBP3	YGL078C	RSA3	Q05942	220 aa	Known RBP	4.74	□□□□□ -1.65
DBP3	YGL078C	HRK1	Q08732	759 aa	Known RBP	4.74	□□□□□ -1.65
DBP3	YGL078C	PTC5	Q12511	572 aa		4.74	□□□□□ -1.65
DBP3	YGL078C	MSP1	P28737	362 aa		4.73	□□□□□ -1.65
DBP3	YGL078C	DUT1	P33317	147 aa		4.73	□□□□□ -1.65
DBP3	YGL078C	QNS1	P38795	714 aa	Known RBP	4.73	□□□□□ -1.65
DBP3	YGL078C	VAC8	P39968	578 aa		4.73	□□□□□ -1.65
DBP3	YGL078C	DJP1	P40564	432 aa		4.73	□□□□□ -1.65
DBP3	YGL078C	CIT3	P43635	486 aa		4.73	□□□□□ -1.65
DBP3	YGL078C	ALT1	P52893	592 aa		4.73	□□□□□ -1.65
DBP3	YGL078C	ALD6	P54115	500 aa	Known RBP	4.73	□□□□□ -1.65
DBP3	YGL078C	RAT1	Q02792	1006 aa	Known RBP	4.73	□□□□□ -1.65
DBP3	YGL078C	TPP1	Q03796	238 aa		4.73	□□□□□ -1.65
DBP3	YGL078C	YLR257W	Q06146	321 aa	Known RBP	4.73	□□□□□ -1.65
DBP3	YGL078C	YOR059C	Q08448	450 aa	Known RBP	4.73	□□□□□ -1.65
DBP3	YGL078C	YLR122C	Q12312	125 aa		4.73	□□□□□ -1.65
DBP3	YGL078C	ESP1	Q03018	1630 aa		4.73	□□□□□ -1.65
DBP3	YGL078C	SNQ2	P32568	1501 aa	Known RBP	4.72	□□□□□ -1.65
DBP3	YGL078C	GEA1	P47102	1408 aa	Predicted RBP	4.72	□□□□□ -1.65
DBP3	YGL078C	MSB1	P21339	1137 aa	Known RBP	4.72	□□□□□ -1.65
DBP3	YGL078C	AFG2	P32794	780 aa		4.72	□□□□□ -1.65
DBP3	YGL078C	RER2	P35196	286 aa		4.72	□□□□□ -1.65
DBP3	YGL078C	ALG3	P38179	458 aa		4.72	□□□□□ -1.65
DBP3	YGL078C	ESC2	Q06340	456 aa		4.72	□□□□□ -1.65
DBP3	YGL078C	MAG2	Q06436	670 aa	Known RBP	4.72	□□□□□ -1.65
DBP3	YGL078C	NSI1	Q12457	570 aa		4.72	□□□□□ -1.65
DBP3	YGL078C	YOR1	P53049	1477 aa		4.72	□□□□□ -1.65
DBP3	YGL078C	WHI3	P34761	661 aa	Known RBP	4.71	□□□□□ -1.66
DBP3	YGL078C	VPS27	P40343	622 aa	Known RBP	4.71	□□□□□ -1.66
DBP3	YGL078C	TPM2	P40414	161 aa		4.71	□□□□□ -1.66
DBP3	YGL078C	CNN1	P43618	361 aa		4.71	□□□□□ -1.66
DBP3	YGL078C	FAA4	P47912	694 aa	Known RBP	4.71	□□□□□ -1.66
DBP3	YGL078C	TYW3	P53177	273 aa		4.71	□□□□□ -1.66
DBP3	YGL078C	YGR053C	P53234	283 aa		4.71	□□□□□ -1.66
DBP3	YGL078C	PIL1	P53252	339 aa	Known RBP	4.71	□□□□□ -1.66
DBP3	YGL078C	SPO20	Q04359	397 aa		4.71	□□□□□ -1.66
DBP3	YGL078C	PUS7	Q08647	676 aa	Known RBP	4.71	□□□□□ -1.66
DBP3	YGL078C	YCF1	P39109	1515 aa	Known RBP	4.7	□□□□□ -1.66
DBP3	YGL078C	SBP1	P10080	294 aa	Known RBP	4.7	□□□□□ -1.66
DBP3	YGL078C	DBP5	P20449	482 aa	Known RBP	4.7	□□□□□ -1.66
DBP3	YGL078C	LYP1	P32487	611 aa		4.7	□□□□□ -1.66
DBP3	YGL078C	TCD1	P38756	429 aa		4.7	□□□□□ -1.66
DBP3	YGL078C	NMD3	P38861	518 aa	Known RBP	4.7	□□□□□ -1.66
DBP3	YGL078C	DSN1	P40568	576 aa		4.7	□□□□□ -1.66
DBP3	YGL078C	RCM1	P53972	490 aa		4.7	□□□□□ -1.66
DBP3	YGL078C	EEB1	Q02891	456 aa		4.7	□□□□□ -1.66
DBP3	YGL078C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
DBP3	YGL078C	GCN2	P15442	1659 aa		4.7	□□□□□ -1.66
DBP3	YGL078C	TRP2	P00899	507 aa	Known RBP	4.7	□□□□□ -1.66
DBP3	YGL078C	RGD1	P38339	666 aa		4.7	□□□□□ -1.66
DBP3	YGL078C	CHZ1	P40019	153 aa	Predicted RBP	4.7	□□□□□ -1.66
DBP3	YGL078C	PRP3	Q03338	469 aa	Predicted RBP	4.7	□□□□□ -1.66
DBP3	YGL078C	YPL260W	Q08977	551 aa		4.7	□□□□□ -1.66
DBP3	YGL078C	FAL1	Q12099	399 aa	Known RBP	4.7	□□□□□ -1.66
DBP3	YGL078C	LSP1	Q12230	341 aa	Known RBP	4.7	□□□□□ -1.66
DBP3	YGL078C	KIP1	P28742	1111 aa		4.69	□□□□□ -1.66
DBP3	YGL078C	MCM7	P38132	845 aa		4.69	□□□□□ -1.66
DBP3	YGL078C	EAR1	Q03212	550 aa		4.69	□□□□□ -1.66
DBP3	YGL078C	WRS1	Q12109	432 aa	Known RBP	4.69	□□□□□ -1.66
DBP3	YGL078C	TRM3	Q07527	1436 aa		4.69	□□□□□ -1.66
DBP3	YGL078C	MLS1	P30952	554 aa		4.68	□□□□□ -1.66
DBP3	YGL078C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
DBP3	YGL078C	YJL045W	P47052	634 aa		4.68	□□□□□ -1.66
DBP3	YGL078C	HNT2	P49775	206 aa		4.68	□□□□□ -1.66
DBP3	YGL078C	TIF35	Q04067	274 aa	Known RBP	4.68	□□□□□ -1.66
DBP3	YGL078C	AOS1	Q06624	347 aa		4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms