RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN12, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN12YFR052W LAP2Q10740 671 aa5.94□□□□□ -1.46
RPN12YFR052W TY1A-DR3Q12441 440 aa5.94□□□□□ -1.46
RPN12YFR052W PRE8P23639 250 aa5.93□□□□□ -1.46
RPN12YFR052W PRO3P32263 286 aaKnown RBP5.93□□□□□ -1.46
RPN12YFR052W GEF1P37020 779 aa5.93□□□□□ -1.46
RPN12YFR052W AAP1P37898 856 aaKnown RBP5.93□□□□□ -1.46
RPN12YFR052W CST26P38226 397 aa5.93□□□□□ -1.46
RPN12YFR052W SSN3P39073 555 aa5.93□□□□□ -1.46
RPN12YFR052W MSH4P40965 878 aaPredicted RBP5.93□□□□□ -1.46
RPN12YFR052W UBP15P50101 1230 aa5.93□□□□□ -1.46
RPN12YFR052W ECM16Q04217 1267 aaKnown RBP5.93□□□□□ -1.46
RPN12YFR052W MRD1Q06106 887 aaKnown RBP5.93□□□□□ -1.46
RPN12YFR052W SYT1Q06836 1226 aa5.93□□□□□ -1.46
RPN12YFR052W PGA3Q12746 312 aaKnown RBP5.93□□□□□ -1.46
RPN12YFR052W ACE2P21192 770 aa5.92□□□□□ -1.46
RPN12YFR052W SRM1P21827 482 aa5.92□□□□□ -1.46
RPN12YFR052W OPI1P21957 404 aa5.92□□□□□ -1.46
RPN12YFR052W OCT1P35999 772 aa5.92□□□□□ -1.46
RPN12YFR052W BRN1P38170 754 aa5.92□□□□□ -1.46
RPN12YFR052W RTS1P38903 757 aa5.92□□□□□ -1.46
RPN12YFR052W HXT17P53631 564 aa5.92□□□□□ -1.46
RPN12YFR052W HDA1P53973 706 aa5.92□□□□□ -1.46
RPN12YFR052W UFD2P54860 961 aa5.92□□□□□ -1.46
RPN12YFR052W STE20Q03497 939 aaKnown RBP5.92□□□□□ -1.46
RPN12YFR052W FPR4Q06205 392 aaPredicted RBP5.92□□□□□ -1.46
RPN12YFR052W RAD61Q99359 647 aa5.92□□□□□ -1.46
RPN12YFR052W SAM2P19358 384 aaKnown RBP5.91□□□□□ -1.46
RPN12YFR052W DIT1P21623 536 aa5.91□□□□□ -1.46
RPN12YFR052W PKC1P24583 1151 aa5.91□□□□□ -1.46
RPN12YFR052W CHS3P29465 1165 aa5.91□□□□□ -1.46
RPN12YFR052W MET1P36150 593 aa5.91□□□□□ -1.46
RPN12YFR052W BRL1P38770 471 aa5.91□□□□□ -1.46
RPN12YFR052W TIF4631P39935 952 aaKnown RBP5.91□□□□□ -1.46
RPN12YFR052W SNU71P53207 620 aaKnown RBP5.91□□□□□ -1.46
RPN12YFR052W DMA2P53924 522 aa5.91□□□□□ -1.46
RPN12YFR052W RPS15Q01855 142 aaKnown RBP5.91□□□□□ -1.46
RPN12YFR052W SGD1Q06132 899 aa5.91□□□□□ -1.46
RPN12YFR052W WTM2Q12206 467 aa5.91□□□□□ -1.46
RPN12YFR052W SPT2P06843 333 aaPredicted RBP5.9□□□□□ -1.46
RPN12YFR052W RIT1P23796 513 aa5.9□□□□□ -1.46
RPN12YFR052W HXT13P39924 564 aa5.9□□□□□ -1.46
RPN12YFR052W DLD3P39976 496 aaKnown RBP5.9□□□□□ -1.46
RPN12YFR052W YJL007CP47080 104 aa5.9□□□□□ -1.46
RPN12YFR052W NCS6P53088 359 aa5.9□□□□□ -1.46
RPN12YFR052W SKG3Q06315 1026 aa5.9□□□□□ -1.46
RPN12YFR052W YDR461C-AQ2V2P7 80 aa5.9□□□□□ -1.46
RPN12YFR052W RPP2BP02400 110 aaKnown RBP5.89□□□□□ -1.47
RPN12YFR052W IMP2'P32351 346 aa5.89□□□□□ -1.47
RPN12YFR052W MCD4P36051 919 aa5.89□□□□□ -1.47
RPN12YFR052W ERG7P38604 731 aa5.89□□□□□ -1.47
RPN12YFR052W CIC1P38779 376 aaKnown RBP5.89□□□□□ -1.47
RPN12YFR052W VPS8P39702 1274 aa5.89□□□□□ -1.47
RPN12YFR052W LYS14P40971 790 aa5.89□□□□□ -1.47
RPN12YFR052W SPR3P41901 512 aa5.89□□□□□ -1.47
RPN12YFR052W NET1P47035 1189 aa5.89□□□□□ -1.47
RPN12YFR052W YMR265CQ03508 461 aaKnown RBP5.89□□□□□ -1.47
RPN12YFR052W YML037CQ03703 340 aa5.89□□□□□ -1.47
RPN12YFR052W SRS2P12954 1174 aa5.88□□□□□ -1.47
RPN12YFR052W ANP1P32629 500 aa5.88□□□□□ -1.47
RPN12YFR052W SKI2P35207 1287 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
RPN12YFR052W MYO3P36006 1272 aa5.88□□□□□ -1.47
RPN12YFR052W PAM1P37304 830 aaKnown RBP5.88□□□□□ -1.47
RPN12YFR052W YLR225CQ05948 407 aaKnown RBP5.88□□□□□ -1.47
RPN12YFR052W SUE1Q06524 206 aa5.88□□□□□ -1.47
RPN12YFR052W UBX5Q06682 500 aa5.88□□□□□ -1.47
RPN12YFR052W CFT2Q12102 859 aaPredicted RBP5.88□□□□□ -1.47
RPN12YFR052W SSF2Q12153 453 aaPredicted RBP5.88□□□□□ -1.47
RPN12YFR052W UBR2Q07963 1872 aa5.88□□□□□ -1.47
RPN12YFR052W CDC60P26637 1090 aaKnown RBP5.87□□□□□ -1.47
RPN12YFR052W RER2P35196 286 aa5.87□□□□□ -1.47
RPN12YFR052W YBL036CP38197 257 aa5.87□□□□□ -1.47
RPN12YFR052W VAB2P40003 282 aa5.87□□□□□ -1.47
RPN12YFR052W CSM2P40465 213 aa5.87□□□□□ -1.47
RPN12YFR052W ADE12P80210 433 aaKnown RBP5.87□□□□□ -1.47
RPN12YFR052W SPN1Q06505 410 aaPredicted RBP5.87□□□□□ -1.47
RPN12YFR052W TUS1Q06412 1307 aa5.87□□□□□ -1.47
RPN12YFR052W SKN7P38889 622 aa5.86□□□□□ -1.47
RPN12YFR052W SBE2P42223 864 aaKnown RBP5.86□□□□□ -1.47
RPN12YFR052W KRE33P53914 1056 aaKnown RBP5.86□□□□□ -1.47
RPN12YFR052W VPS30Q02948 557 aa5.86□□□□□ -1.47
RPN12YFR052W SUB2Q07478 446 aaKnown RBP5.86□□□□□ -1.47
RPN12YFR052W YPR053CQ6Q5F3 151 aa5.86□□□□□ -1.47
RPN12YFR052W SAM1P10659 382 aaKnown RBP5.85□□□□□ -1.47
RPN12YFR052W PEP3P27801 918 aa5.85□□□□□ -1.47
RPN12YFR052W NDT80P38830 627 aa5.85□□□□□ -1.47
RPN12YFR052W CRG1P38892 291 aaRIP-Chip data5.85□□□□□ -1.47not detected
RPN12YFR052W KRI1P42846 591 aaKnown RBP5.85□□□□□ -1.47
RPN12YFR052W ATG1P53104 897 aa5.85□□□□□ -1.47
RPN12YFR052W NRD1P53617 575 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
RPN12YFR052W FOL1P53848 824 aa5.85□□□□□ -1.47
RPN12YFR052W ISR1Q06098 443 aaKnown RBP5.85□□□□□ -1.47
RPN12YFR052W TFC6Q06339 672 aa5.85□□□□□ -1.47
RPN12YFR052W ESF1Q06344 628 aaKnown RBP5.85□□□□□ -1.47
RPN12YFR052W RIF1P29539 1916 aa5.85□□□□□ -1.47
RPN12YFR052W NUC1P08466 329 aa5.84□□□□□ -1.47
RPN12YFR052W RAD18P10862 487 aa5.84□□□□□ -1.47
RPN12YFR052W VMA2P16140 517 aaKnown RBP5.84□□□□□ -1.47
RPN12YFR052W MAK31P23059 88 aa5.84□□□□□ -1.47
RPN12YFR052W PER1P25625 357 aa5.84□□□□□ -1.47
RPN12YFR052W RPL8BP29453 256 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms