RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W PET10P36139 283 aa8.77□□□□□ -1.01
SHC1YER096W MRPL10P36520 322 aa8.77□□□□□ -1.01
SHC1YER096W RRT6P53117 311 aaPredicted RBP8.77□□□□□ -1.01
SHC1YER096W YGL039WP53183 348 aaKnown RBP8.77□□□□□ -1.01
SHC1YER096W LSC2P53312 427 aa8.77□□□□□ -1.01
SHC1YER096W ORC4P54791 529 aa8.77□□□□□ -1.01
SHC1YER096W DUS3Q06053 668 aaKnown RBP8.77□□□□□ -1.01
SHC1YER096W TYW1Q08960 810 aaKnown RBP8.77□□□□□ -1.01
SHC1YER096W ILV1P00927 576 aaKnown RBP8.76□□□□□ -1.01
SHC1YER096W YEL076C-AP0CX16 216 aa8.76□□□□□ -1.01
SHC1YER096W YLR464WP0CX17 216 aa8.76□□□□□ -1.01
SHC1YER096W HIR1P32479 840 aa8.76□□□□□ -1.01
SHC1YER096W UBP11P36026 717 aa8.76□□□□□ -1.01
SHC1YER096W PCS60P38137 543 aaKnown RBP RIP-Chip data8.76□□□□□ -1.01not detected
SHC1YER096W RRM3P38766 723 aa8.76□□□□□ -1.01
SHC1YER096W YEL076CP39971 216 aa8.76□□□□□ -1.01
SHC1YER096W THI6P41835 540 aa8.76□□□□□ -1.01
SHC1YER096W SPH1Q06160 661 aa8.76□□□□□ -1.01
SHC1YER096W AFT2Q08957 416 aa8.76□□□□□ -1.01
SHC1YER096W ARP6Q12509 438 aa8.76□□□□□ -1.01
SHC1YER096W GSY1P23337 708 aa8.75□□□□□ -1.01
SHC1YER096W SIS1P25294 352 aaKnown RBP8.75□□□□□ -1.01
SHC1YER096W MCM2P29469 868 aa8.75□□□□□ -1.01
SHC1YER096W UTR4P32626 227 aa8.75□□□□□ -1.01
SHC1YER096W NOC2P39744 710 aaKnown RBP8.75□□□□□ -1.01
SHC1YER096W RTC4P53850 401 aa8.75□□□□□ -1.01
SHC1YER096W ALD6P54115 500 aaKnown RBP8.75□□□□□ -1.01
SHC1YER096W TMA16Q08687 178 aa8.75□□□□□ -1.01
SHC1YER096W RKM4Q12504 494 aa8.75□□□□□ -1.01
SHC1YER096W RPL22AP05749 121 aaKnown RBP8.75□□□□□ -1.01
SHC1YER096W SRO9P25567 434 aaKnown RBP8.75□□□□□ -1.01
SHC1YER096W PER1P25625 357 aa8.75□□□□□ -1.01
SHC1YER096W SAC6P32599 642 aaKnown RBP8.75□□□□□ -1.01
SHC1YER096W IXR1P33417 597 aa8.75□□□□□ -1.01
SHC1YER096W LIF1P53150 421 aa8.75□□□□□ -1.01
SHC1YER096W MFM1Q02783 413 aa8.75□□□□□ -1.01
SHC1YER096W OYE2Q03558 400 aaKnown RBP8.75□□□□□ -1.01
SHC1YER096W WAR1Q03631 944 aa8.75□□□□□ -1.01
SHC1YER096W BUL2Q03758 920 aaKnown RBP8.75□□□□□ -1.01
SHC1YER096W CSM3Q04659 317 aa8.75□□□□□ -1.01
SHC1YER096W ECM29P38737 1868 aa8.74□□□□□ -1.01
SHC1YER096W HVG1P0CE11 249 aa8.74□□□□□ -1.01
SHC1YER096W ISY1P21374 235 aaPredicted RBP8.74□□□□□ -1.01
SHC1YER096W ESS1P22696 170 aa8.74□□□□□ -1.01
SHC1YER096W DIP5P53388 608 aa8.74□□□□□ -1.01
SHC1YER096W CBK1P53894 756 aa8.74□□□□□ -1.01
SHC1YER096W GUD1Q07729 489 aa8.74□□□□□ -1.01
SHC1YER096W SES1P07284 462 aaKnown RBP8.73□□□□□ -1.01
SHC1YER096W PWP2P25635 923 aaKnown RBP8.73□□□□□ -1.01
SHC1YER096W PIH1P38768 344 aa8.73□□□□□ -1.01
SHC1YER096W ULP2P40537 1034 aaPredicted RBP8.73□□□□□ -1.01
SHC1YER096W YOL075CQ08234 1294 aa8.73□□□□□ -1.01
SHC1YER096W YPL216WQ08964 1102 aa8.73□□□□□ -1.01
SHC1YER096W MIP1P15801 1254 aa8.72□□□□□ -1.01
SHC1YER096W MPE1P35728 441 aaKnown RBP8.72□□□□□ -1.01
SHC1YER096W MCR1P36060 302 aaKnown RBP8.72□□□□□ -1.01
SHC1YER096W ISW1P38144 1129 aa8.72□□□□□ -1.01
SHC1YER096W VAB2P40003 282 aa8.72□□□□□ -1.01
SHC1YER096W GPD2P41911 440 aaKnown RBP8.72□□□□□ -1.01
SHC1YER096W NET1P47035 1189 aa8.72□□□□□ -1.01
SHC1YER096W YGR237CP50089 785 aa8.72□□□□□ -1.01
SHC1YER096W PGA2P53903 129 aa8.72□□□□□ -1.01
SHC1YER096W PTA1Q01329 785 aaPredicted RBP8.72□□□□□ -1.01
SHC1YER096W SMC6Q12749 1114 aa8.72□□□□□ -1.01
SHC1YER096W FOB1O13329 566 aa8.71□□□□□ -1.01
SHC1YER096W TAF13P11747 167 aa8.71□□□□□ -1.01
SHC1YER096W SUP45P12385 437 aaKnown RBP8.71□□□□□ -1.01
SHC1YER096W CKA2P19454 339 aa8.71□□□□□ -1.01
SHC1YER096W MCD4P36051 919 aa8.71□□□□□ -1.01
SHC1YER096W ROG3P43602 733 aa8.71□□□□□ -1.01
SHC1YER096W YLH47Q06493 454 aa8.71□□□□□ -1.01
SHC1YER096W YDL057WQ07379 328 aa8.71□□□□□ -1.01
SHC1YER096W CFT2Q12102 859 aaPredicted RBP8.71□□□□□ -1.01
SHC1YER096W PSO2P30620 661 aa8.7□□□□□ -1.02
SHC1YER096W MIC60P36112 540 aa8.7□□□□□ -1.02
SHC1YER096W AIP1P46680 615 aaKnown RBP8.7□□□□□ -1.02
SHC1YER096W GUP1P53154 560 aa8.7□□□□□ -1.02
SHC1YER096W FUS2Q05670 677 aa8.7□□□□□ -1.02
SHC1YER096W ERP3Q12403 225 aa8.7□□□□□ -1.02
SHC1YER096W VMA2P16140 517 aaKnown RBP8.7□□□□□ -1.02
SHC1YER096W PRP22P24384 1145 aaKnown RBP8.7□□□□□ -1.02
SHC1YER096W ASH1P34233 588 aa8.7□□□□□ -1.02
SHC1YER096W SIP3P38717 1229 aa8.7□□□□□ -1.02
SHC1YER096W ETP1P38748 585 aaKnown RBP8.7□□□□□ -1.02
SHC1YER096W VTC2P43585 828 aa8.7□□□□□ -1.02
SHC1YER096W JIP4Q03361 876 aa8.7□□□□□ -1.02
SHC1YER096W DUS4Q06063 367 aa8.7□□□□□ -1.02
SHC1YER096W YDR461C-AQ2V2P7 80 aa8.7□□□□□ -1.02
SHC1YER096W EUG1P32474 517 aa8.69□□□□□ -1.02
SHC1YER096W YET1P35723 206 aa8.69□□□□□ -1.02
SHC1YER096W SHM1P37292 490 aaPredicted RBP8.69□□□□□ -1.02
SHC1YER096W ADE17P38009 592 aaKnown RBP8.69□□□□□ -1.02
SHC1YER096W PPS1P38148 807 aa8.69□□□□□ -1.02
SHC1YER096W BCD1P38772 366 aa8.69□□□□□ -1.02
SHC1YER096W BIM1P40013 344 aa8.69□□□□□ -1.02
SHC1YER096W RBA50Q04418 439 aa8.69□□□□□ -1.02
SHC1YER096W SPP382Q06411 708 aaPredicted RBP8.69□□□□□ -1.02
SHC1YER096W TLG2Q08144 397 aa8.69□□□□□ -1.02
SHC1YER096W PFK1P16861 987 aaKnown RBP8.68□□□□□ -1.02
SHC1YER096W CDC60P26637 1090 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms