RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C RTS1P38903 757 aa6.92□□□□□ -1.3
VPS61YDR136C ATG3P40344 310 aa6.92□□□□□ -1.3
VPS61YDR136C CSM2P40465 213 aa6.92□□□□□ -1.3
VPS61YDR136C SHQ1P40486 507 aaPredicted RBP6.92□□□□□ -1.3
VPS61YDR136C DAK2P43550 591 aa6.92□□□□□ -1.3
VPS61YDR136C ALG2P43636 503 aa6.92□□□□□ -1.3
VPS61YDR136C YGR237CP50089 785 aa6.92□□□□□ -1.3
VPS61YDR136C YGL140CP53120 1219 aa6.92□□□□□ -1.3
VPS61YDR136C RTC4P53850 401 aa6.92□□□□□ -1.3
VPS61YDR136C GYL1Q04322 720 aa6.92□□□□□ -1.3
VPS61YDR136C YOR296WQ08748 1289 aa6.92□□□□□ -1.3
VPS61YDR136C NEW1Q08972 1196 aaKnown RBP6.92□□□□□ -1.3
VPS61YDR136C TIP41Q12199 356 aa6.92□□□□□ -1.3
VPS61YDR136C RPS6AP0CX37 236 aaKnown RBP6.91□□□□□ -1.3
VPS61YDR136C RPS6BP0CX38 236 aaPredicted RBP6.91□□□□□ -1.3
VPS61YDR136C MAK31P23059 88 aa6.91□□□□□ -1.3
VPS61YDR136C GLN1P32288 370 aaKnown RBP6.91□□□□□ -1.3
VPS61YDR136C MUD2P36084 527 aaKnown RBP6.91□□□□□ -1.3
VPS61YDR136C BOI1P38041 980 aaKnown RBP6.91□□□□□ -1.3
VPS61YDR136C ECM1P39715 212 aa6.91□□□□□ -1.3
VPS61YDR136C ICP55P40051 511 aa6.91□□□□□ -1.3
VPS61YDR136C EFM4P40516 257 aa6.91□□□□□ -1.3
VPS61YDR136C AIP1P46680 615 aaKnown RBP6.91□□□□□ -1.3
VPS61YDR136C FYV8P46949 817 aaKnown RBP6.91□□□□□ -1.3
VPS61YDR136C YGL138CP53122 345 aa6.91□□□□□ -1.3
VPS61YDR136C LSC2P53312 427 aa6.91□□□□□ -1.3
VPS61YDR136C HST2P53686 357 aa6.91□□□□□ -1.3
VPS61YDR136C MYO5Q04439 1219 aaKnown RBP6.91□□□□□ -1.3
VPS61YDR136C VAC14Q06708 880 aa6.91□□□□□ -1.3
VPS61YDR136C DIB1Q06819 143 aaPredicted RBP6.91□□□□□ -1.3
VPS61YDR136C OSH2Q12451 1283 aa6.91□□□□□ -1.3
VPS61YDR136C MTF2P10849 440 aa6.9□□□□□ -1.3
VPS61YDR136C RPT3P33298 428 aaKnown RBP6.9□□□□□ -1.3
VPS61YDR136C GUA1P38625 525 aaKnown RBP6.9□□□□□ -1.3
VPS61YDR136C MIP6P38760 659 aaKnown RBP6.9□□□□□ -1.3
VPS61YDR136C SPT8P38915 602 aa6.9□□□□□ -1.3
VPS61YDR136C VFA1P40080 203 aa6.9□□□□□ -1.3
VPS61YDR136C LYS14P40971 790 aa6.9□□□□□ -1.3
VPS61YDR136C HUL4P40985 892 aa6.9□□□□□ -1.3
VPS61YDR136C CTK3P46963 296 aaPredicted RBP6.9□□□□□ -1.3
VPS61YDR136C YGR153WP48238 217 aa6.9□□□□□ -1.3
VPS61YDR136C HFM1P51979 1187 aa6.9□□□□□ -1.3
VPS61YDR136C EBS1Q03466 884 aaKnown RBP6.9□□□□□ -1.3
VPS61YDR136C EIS1Q05050 843 aaKnown RBP6.9□□□□□ -1.3
VPS61YDR136C MRD1Q06106 887 aaKnown RBP6.9□□□□□ -1.3
VPS61YDR136C PSR2Q07949 397 aa6.9□□□□□ -1.3
VPS61YDR136C RRP6Q12149 733 aaKnown RBP6.9□□□□□ -1.3
VPS61YDR136C MET6P05694 767 aaKnown RBP6.89□□□□□ -1.31
VPS61YDR136C RAD57P25301 460 aa6.89□□□□□ -1.31
VPS61YDR136C NFU1P32860 256 aa6.89□□□□□ -1.31
VPS61YDR136C PTK1P36002 662 aaPredicted RBP6.89□□□□□ -1.31
VPS61YDR136C BYE1P36106 594 aa6.89□□□□□ -1.31
VPS61YDR136C MED8P38304 223 aa6.89□□□□□ -1.31
VPS61YDR136C ISM1P48526 1002 aa6.89□□□□□ -1.31
VPS61YDR136C YNL115CP53925 644 aa6.89□□□□□ -1.31
VPS61YDR136C HPC2Q01448 625 aa6.89□□□□□ -1.31
VPS61YDR136C VTC3Q02725 835 aa6.89□□□□□ -1.31
VPS61YDR136C YMR102CQ03177 834 aa6.89□□□□□ -1.31
VPS61YDR136C YDR341CQ05506 607 aaKnown RBP6.89□□□□□ -1.31
VPS61YDR136C TOS4Q06266 489 aa6.89□□□□□ -1.31
VPS61YDR136C SPP382Q06411 708 aaPredicted RBP6.89□□□□□ -1.31
VPS61YDR136C OMS1Q06668 471 aa6.89□□□□□ -1.31
VPS61YDR136C MMP1Q12372 583 aa6.89□□□□□ -1.31
VPS61YDR136C SPO12P17123 173 aa6.88□□□□□ -1.31
VPS61YDR136C RIT1P23796 513 aa6.88□□□□□ -1.31
VPS61YDR136C ERG7P38604 731 aa6.88□□□□□ -1.31
VPS61YDR136C SPL2P38839 148 aa6.88□□□□□ -1.31
VPS61YDR136C SYF1Q04048 859 aaPredicted RBP6.88□□□□□ -1.31
VPS61YDR136C UTP5Q04177 643 aaKnown RBP6.88□□□□□ -1.31
VPS61YDR136C YLR287CQ05881 355 aa6.88□□□□□ -1.31
VPS61YDR136C YAP7Q08182 245 aa6.88□□□□□ -1.31
VPS61YDR136C RMP1Q12530 201 aa6.88□□□□□ -1.31
VPS61YDR136C RAD61Q99359 647 aa6.88□□□□□ -1.31
VPS61YDR136C CIT1P00890 479 aa6.87□□□□□ -1.31
VPS61YDR136C KEX2P13134 814 aa6.87□□□□□ -1.31
VPS61YDR136C THR4P16120 514 aaKnown RBP6.87□□□□□ -1.31
VPS61YDR136C CKI1P20485 582 aa6.87□□□□□ -1.31
VPS61YDR136C PSO2P30620 661 aa6.87□□□□□ -1.31
VPS61YDR136C SRB4P32569 687 aa6.87□□□□□ -1.31
VPS61YDR136C CNS1P33313 385 aa6.87□□□□□ -1.31
VPS61YDR136C RGD1P38339 666 aa6.87□□□□□ -1.31
VPS61YDR136C SMF1P38925 575 aa6.87□□□□□ -1.31
VPS61YDR136C VPS8P39702 1274 aa6.87□□□□□ -1.31
VPS61YDR136C MIC19P43594 170 aa6.87□□□□□ -1.31
VPS61YDR136C RPT4P53549 437 aaKnown RBP6.87□□□□□ -1.31
VPS61YDR136C IRC4Q03036 179 aa6.87□□□□□ -1.31
VPS61YDR136C NGL3Q03210 505 aa6.87□□□□□ -1.31
VPS61YDR136C NOP6Q07623 225 aaKnown RBP6.87□□□□□ -1.31
VPS61YDR136C NUR1Q12066 484 aa6.87□□□□□ -1.31
VPS61YDR136C BUG1Q12191 341 aa6.87□□□□□ -1.31
VPS61YDR136C YPR015CQ12531 247 aa6.87□□□□□ -1.31
VPS61YDR136C PRO3P32263 286 aaKnown RBP6.86□□□□□ -1.31
VPS61YDR136C GCD11P32481 527 aaKnown RBP6.86□□□□□ -1.31
VPS61YDR136C BCK2P33306 851 aa6.86□□□□□ -1.31
VPS61YDR136C STT3P39007 718 aaKnown RBP6.86□□□□□ -1.31
VPS61YDR136C THI6P41835 540 aa6.86□□□□□ -1.31
VPS61YDR136C YFH7P43591 353 aa6.86□□□□□ -1.31
VPS61YDR136C UBA2P52488 636 aa6.86□□□□□ -1.31
VPS61YDR136C UME1Q03010 460 aa6.86□□□□□ -1.31
VPS61YDR136C POB3Q04636 552 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms