RNA–Protein interactions for RNA: YDL051W

LHP1, RNA binding protein required for maturation of tRNA and U6 snRNA, yeast

Gene LHP1, Length 828 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LHP1	YDL051W	TSR1	Q07381	788 aa	Known RBP	5.2	□□□□□ -1.58
LHP1	YDL051W	NEW1	Q08972	1196 aa	Known RBP	5.2	□□□□□ -1.58
LHP1	YDL051W	NYV1	Q12255	253 aa		5.2	□□□□□ -1.58
LHP1	YDL051W	TUF1	P02992	437 aa	Known RBP	5.19	□□□□□ -1.58
LHP1	YDL051W	RAD1	P06777	1100 aa		5.19	□□□□□ -1.58
LHP1	YDL051W	PBS2	P08018	668 aa		5.19	□□□□□ -1.58
LHP1	YDL051W	RPC53	P25441	422 aa		5.19	□□□□□ -1.58
LHP1	YDL051W	PWP2	P25635	923 aa	Known RBP	5.19	□□□□□ -1.58
LHP1	YDL051W	MSH1	P25846	959 aa		5.19	□□□□□ -1.58
LHP1	YDL051W	RPL8B	P29453	256 aa	Known RBP	5.19	□□□□□ -1.58
LHP1	YDL051W	MGM1	P32266	881 aa		5.19	□□□□□ -1.58
LHP1	YDL051W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
LHP1	YDL051W	SIP3	P38717	1229 aa		5.19	□□□□□ -1.58
LHP1	YDL051W	MIP6	P38760	659 aa	Known RBP	5.19	□□□□□ -1.58
LHP1	YDL051W	RIO2	P40160	425 aa	Known RBP	5.19	□□□□□ -1.58
LHP1	YDL051W	SHQ1	P40486	507 aa	Predicted RBP	5.19	□□□□□ -1.58
LHP1	YDL051W	PCI8	P40512	444 aa		5.19	□□□□□ -1.58
LHP1	YDL051W	HUL4	P40985	892 aa		5.19	□□□□□ -1.58
LHP1	YDL051W	DAK2	P43550	591 aa		5.19	□□□□□ -1.58
LHP1	YDL051W	TRS85	P46944	698 aa		5.19	□□□□□ -1.58
LHP1	YDL051W	YGR237C	P50089	785 aa		5.19	□□□□□ -1.58
LHP1	YDL051W	VTC3	Q02725	835 aa		5.19	□□□□□ -1.58
LHP1	YDL051W	TOS4	Q06266	489 aa		5.19	□□□□□ -1.58
LHP1	YDL051W	IRC3	Q06683	689 aa		5.19	□□□□□ -1.58
LHP1	YDL051W	MPC54	Q08550	464 aa		5.19	□□□□□ -1.58
LHP1	YDL051W	YPL260W	Q08977	551 aa		5.19	□□□□□ -1.58
LHP1	YDL051W	BUG1	Q12191	341 aa		5.19	□□□□□ -1.58
LHP1	YDL051W	ZRT2	Q12436	422 aa		5.19	□□□□□ -1.58
LHP1	YDL051W	MET6	P05694	767 aa	Known RBP	5.18	□□□□□ -1.58
LHP1	YDL051W	RPB2	P08518	1224 aa	Known RBP	5.18	□□□□□ -1.58
LHP1	YDL051W	SWI6	P09959	803 aa		5.18	□□□□□ -1.58
LHP1	YDL051W	RIT1	P23796	513 aa		5.18	□□□□□ -1.58
LHP1	YDL051W	CDC11	P32458	415 aa		5.18	□□□□□ -1.58
LHP1	YDL051W	NIP100	P33420	868 aa		5.18	□□□□□ -1.58
LHP1	YDL051W	GRX7	P38068	203 aa		5.18	□□□□□ -1.58
LHP1	YDL051W	SPP381	P38282	291 aa	Predicted RBP	5.18	□□□□□ -1.58
LHP1	YDL051W	GLO3	P38682	493 aa	Known RBP	5.18	□□□□□ -1.58
LHP1	YDL051W	ATG3	P40344	310 aa		5.18	□□□□□ -1.58
LHP1	YDL051W	CTK3	P46963	296 aa	Predicted RBP	5.18	□□□□□ -1.58
LHP1	YDL051W	UBA2	P52488	636 aa		5.18	□□□□□ -1.58
LHP1	YDL051W	CWC22	P53333	577 aa	Known RBP	5.18	□□□□□ -1.58
LHP1	YDL051W	BNI5	P53890	448 aa	Known RBP	5.18	□□□□□ -1.58
LHP1	YDL051W	RPT6	Q01939	405 aa	Known RBP	5.18	□□□□□ -1.58
LHP1	YDL051W	YMR102C	Q03177	834 aa		5.18	□□□□□ -1.58
LHP1	YDL051W	SYF1	Q04048	859 aa	Predicted RBP	5.18	□□□□□ -1.58
LHP1	YDL051W	TRS120	Q04183	1289 aa		5.18	□□□□□ -1.58
LHP1	YDL051W	GYL1	Q04322	720 aa		5.18	□□□□□ -1.58
LHP1	YDL051W	YMR114C	Q04471	368 aa	Known RBP	5.18	□□□□□ -1.58
LHP1	YDL051W	SMD2	Q06217	110 aa	Known RBP	5.18	□□□□□ -1.58
LHP1	YDL051W	YPR078C	Q06813	372 aa		5.18	□□□□□ -1.58
LHP1	YDL051W	NOP6	Q07623	225 aa	Known RBP	5.18	□□□□□ -1.58
LHP1	YDL051W	SPO75	Q07798	868 aa		5.18	□□□□□ -1.58
LHP1	YDL051W	SLK19	Q08581	821 aa	Known RBP	5.18	□□□□□ -1.58
LHP1	YDL051W	DAS2	Q12084	232 aa		5.18	□□□□□ -1.58
LHP1	YDL051W	RIO1	Q12196	484 aa	Known RBP	5.18	□□□□□ -1.58
LHP1	YDL051W	SMC6	Q12749	1114 aa		5.18	□□□□□ -1.58
LHP1	YDL051W	TY4A-H	Q6Q5P6	413 aa		5.18	□□□□□ -1.58
LHP1	YDL051W	YOL087C	Q99247	1116 aa		5.18	□□□□□ -1.58
LHP1	YDL051W	FOB1	O13329	566 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	RPS6A	P0CX37	236 aa	Known RBP	5.17	□□□□□ -1.58
LHP1	YDL051W	RPS6B	P0CX38	236 aa	Predicted RBP	5.17	□□□□□ -1.58
LHP1	YDL051W	PDC6	P26263	563 aa	Known RBP	5.17	□□□□□ -1.58
LHP1	YDL051W	PSO2	P30620	661 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	YKL091C	P33324	310 aa	Known RBP	5.17	□□□□□ -1.58
LHP1	YDL051W	PTK1	P36002	662 aa	Predicted RBP	5.17	□□□□□ -1.58
LHP1	YDL051W	RPC37	P36121	282 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	UGA2	P38067	497 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	DSF2	P38213	736 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	RGD1	P38339	666 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	SMF1	P38925	575 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	CCT3	P39077	534 aa	Known RBP	5.17	□□□□□ -1.58
LHP1	YDL051W	SAP1	P39955	897 aa	Known RBP	5.17	□□□□□ -1.58
LHP1	YDL051W	ICP55	P40051	511 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	VFA1	P40080	203 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	EFM4	P40516	257 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	YIR042C	P40586	236 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	COS5	P47187	383 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	TOF1	P53840	1238 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	JJJ1	P53863	590 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	BOP3	P53958	396 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	UME1	Q03010	460 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	GIR2	Q03768	265 aa	Predicted RBP	5.17	□□□□□ -1.58
LHP1	YDL051W	SAS4	Q04003	481 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	GIS4	Q04233	774 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	YLH47	Q06493	454 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	PTC5	Q12511	572 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	YOR111W	Q99210	232 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	RAD61	Q99359	647 aa		5.17	□□□□□ -1.58
LHP1	YDL051W	DUR1,2	P32528	1835 aa	Known RBP	5.17	□□□□□ -1.58
LHP1	YDL051W	SSB1	P11484	613 aa	Known RBP	5.16	□□□□□ -1.58
LHP1	YDL051W	SPO12	P17123	173 aa		5.16	□□□□□ -1.58
LHP1	YDL051W	CKA2	P19454	339 aa		5.16	□□□□□ -1.58
LHP1	YDL051W	VPS1	P21576	704 aa	Known RBP	5.16	□□□□□ -1.58
LHP1	YDL051W	CDC10	P25342	322 aa	Known RBP	5.16	□□□□□ -1.58
LHP1	YDL051W	APL1	P27351	700 aa		5.16	□□□□□ -1.58
LHP1	YDL051W	SMY1	P32364	656 aa	Known RBP	5.16	□□□□□ -1.58
LHP1	YDL051W	MYO3	P36006	1272 aa		5.16	□□□□□ -1.58
LHP1	YDL051W	JNM1	P36224	373 aa		5.16	□□□□□ -1.58
LHP1	YDL051W	TDA3	P38758	523 aa		5.16	□□□□□ -1.58
LHP1	YDL051W	SSB2	P40150	613 aa	Known RBP	5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms