RNA–Protein interactions for RNA: YCL043C

PDI1, Transcript of Protein disulfide isomerase, yeast

Gene PDI1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDI1	YCL043C	PCI8	P40512	444 aa		5.66	□□□□□ -1.5
PDI1	YCL043C	ALG2	P43636	503 aa		5.66	□□□□□ -1.5
PDI1	YCL043C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
PDI1	YCL043C	PXR1	P53335	271 aa	Predicted RBP	5.66	□□□□□ -1.5
PDI1	YCL043C	RPT6	Q01939	405 aa	Known RBP	5.66	□□□□□ -1.5
PDI1	YCL043C	MRPS28	P21771	286 aa		5.65	□□□□□ -1.5
PDI1	YCL043C	YKT6	P36015	200 aa	Known RBP	5.65	□□□□□ -1.5
PDI1	YCL043C	PCH2	P38126	564 aa		5.65	□□□□□ -1.5
PDI1	YCL043C	RXT2	P38255	430 aa		5.65	□□□□□ -1.5
PDI1	YCL043C	SAP1	P39955	897 aa	Known RBP	5.65	□□□□□ -1.5
PDI1	YCL043C	UTP7	P40055	554 aa	Known RBP	5.65	□□□□□ -1.5
PDI1	YCL043C	HOS4	P40480	1083 aa		5.65	□□□□□ -1.5
PDI1	YCL043C	MTC3	P53077	123 aa		5.65	□□□□□ -1.5
PDI1	YCL043C	VTC3	Q02725	835 aa		5.65	□□□□□ -1.5
PDI1	YCL043C	PCL8	Q08966	492 aa		5.65	□□□□□ -1.5
PDI1	YCL043C	HXK1	P04806	485 aa	Known RBP	5.64	□□□□□ -1.51
PDI1	YCL043C	MET6	P05694	767 aa	Known RBP	5.64	□□□□□ -1.51
PDI1	YCL043C	RPS9B	P05755	195 aa	Known RBP	5.64	□□□□□ -1.51
PDI1	YCL043C	RGP1	P16664	663 aa		5.64	□□□□□ -1.51
PDI1	YCL043C	PRE8	P23639	250 aa		5.64	□□□□□ -1.51
PDI1	YCL043C	MCM4	P30665	933 aa	Known RBP	5.64	□□□□□ -1.51
PDI1	YCL043C	STV1	P37296	890 aa		5.64	□□□□□ -1.51
PDI1	YCL043C	NOC2	P39744	710 aa	Known RBP	5.64	□□□□□ -1.51
PDI1	YCL043C	FYV10	P40492	516 aa		5.64	□□□□□ -1.51
PDI1	YCL043C	SEN54	Q02825	467 aa	Predicted RBP	5.64	□□□□□ -1.51
PDI1	YCL043C	GDE1	Q02979	1223 aa		5.64	□□□□□ -1.51
PDI1	YCL043C	CRF1	Q04930	467 aa		5.64	□□□□□ -1.51
PDI1	YCL043C	EIS1	Q05050	843 aa	Known RBP	5.64	□□□□□ -1.51
PDI1	YCL043C	STE23	Q06010	1027 aa		5.64	□□□□□ -1.51
PDI1	YCL043C	RRP15	Q06511	250 aa	Predicted RBP	5.64	□□□□□ -1.51
PDI1	YCL043C	ATG20	Q07528	640 aa		5.64	□□□□□ -1.51
PDI1	YCL043C	GET3	Q12154	354 aa	Known RBP	5.64	□□□□□ -1.51
PDI1	YCL043C	SMC6	Q12749	1114 aa		5.64	□□□□□ -1.51
PDI1	YCL043C	ACE2	P21192	770 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	SRM1	P21827	482 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	MSM1	P22438	575 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	RPL8B	P29453	256 aa	Known RBP	5.63	□□□□□ -1.51
PDI1	YCL043C	CHS3	P29465	1165 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	SRP40	P32583	406 aa	Predicted RBP	5.63	□□□□□ -1.51
PDI1	YCL043C	BUD16	P39988	312 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	HUL4	P40985	892 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	PXA1	P41909	870 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	STR2	P47164	639 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	CAF130	P53280	1122 aa	Predicted RBP	5.63	□□□□□ -1.51
PDI1	YCL043C	VMS1	Q04311	632 aa	Known RBP	5.63	□□□□□ -1.51
PDI1	YCL043C	YDR341C	Q05506	607 aa	Known RBP	5.63	□□□□□ -1.51
PDI1	YCL043C	SKG3	Q06315	1026 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	ATG23	Q06671	453 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	NOB1	Q08444	459 aa	Known RBP	5.63	□□□□□ -1.51
PDI1	YCL043C	APL4	Q12028	832 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	OSH2	Q12451	1283 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	GSC2	P40989	1895 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.63	□□□□□ -1.51	not detected
PDI1	YCL043C	GAP1	P19145	602 aa	Predicted RBP	5.63	□□□□□ -1.51
PDI1	YCL043C	PHO13	P19881	312 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	MRPL32	P25348	183 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	CDC15	P27636	974 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	URA1	P28272	314 aa	Predicted RBP	5.63	□□□□□ -1.51
PDI1	YCL043C	CDC27	P38042	758 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	YSW1	P38280	609 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	FOL1	P53848	824 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	FAR11	P53917	953 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	TRM44	Q02648	567 aa	Known RBP	5.63	□□□□□ -1.51
PDI1	YCL043C	ERV41	Q04651	352 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	VPS38	Q05919	439 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	CSC1	Q06538	782 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	YVC1	Q12324	675 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	TY4A-H	Q6Q5P6	413 aa		5.63	□□□□□ -1.51
PDI1	YCL043C	RPL22A	P05749	121 aa	Known RBP	5.62	□□□□□ -1.51
PDI1	YCL043C	PRP16	P15938	1071 aa	Predicted RBP	5.62	□□□□□ -1.51
PDI1	YCL043C	KAR3	P17119	729 aa		5.62	□□□□□ -1.51
PDI1	YCL043C	ADP1	P25371	1049 aa		5.62	□□□□□ -1.51
PDI1	YCL043C	ASF1	P32447	279 aa		5.62	□□□□□ -1.51
PDI1	YCL043C	VPS29	P38759	282 aa		5.62	□□□□□ -1.51
PDI1	YCL043C	ILM1	P47155	203 aa		5.62	□□□□□ -1.51
PDI1	YCL043C	YGL138C	P53122	345 aa		5.62	□□□□□ -1.51
PDI1	YCL043C	CUE3	P53137	624 aa	Known RBP	5.62	□□□□□ -1.51
PDI1	YCL043C	GIS4	Q04233	774 aa		5.62	□□□□□ -1.51
PDI1	YCL043C	YDR338C	Q05497	695 aa		5.62	□□□□□ -1.51
PDI1	YCL043C	YDL124W	Q07551	312 aa	Known RBP	5.62	□□□□□ -1.51
PDI1	YCL043C	DSE3	Q08729	430 aa		5.62	□□□□□ -1.51
PDI1	YCL043C	CEX1	Q12453	761 aa		5.62	□□□□□ -1.51
PDI1	YCL043C	PTC5	Q12511	572 aa		5.62	□□□□□ -1.51
PDI1	YCL043C	CIT1	P00890	479 aa		5.61	□□□□□ -1.51
PDI1	YCL043C	NUC1	P08466	329 aa		5.61	□□□□□ -1.51
PDI1	YCL043C	CNS1	P33313	385 aa		5.61	□□□□□ -1.51
PDI1	YCL043C	STO1	P34160	861 aa	Known RBP	5.61	□□□□□ -1.51
PDI1	YCL043C	HEL1	P36113	551 aa		5.61	□□□□□ -1.51
PDI1	YCL043C	EDS1	P38073	919 aa		5.61	□□□□□ -1.51
PDI1	YCL043C	YBL028C	P38202	106 aa		5.61	□□□□□ -1.51
PDI1	YCL043C	UBP14	P38237	781 aa	Known RBP	5.61	□□□□□ -1.51
PDI1	YCL043C	TOM71	P38825	639 aa	Known RBP	5.61	□□□□□ -1.51
PDI1	YCL043C	YJR079W	P47126	109 aa		5.61	□□□□□ -1.51
PDI1	YCL043C	SQS1	P53866	767 aa	Known RBP	5.61	□□□□□ -1.51
PDI1	YCL043C	NAF1	P53919	492 aa	Known RBP	5.61	□□□□□ -1.51
PDI1	YCL043C	MDM1	Q01846	1127 aa		5.61	□□□□□ -1.51
PDI1	YCL043C	SPO19	Q03029	223 aa		5.61	□□□□□ -1.51
PDI1	YCL043C	LCB5	Q06147	687 aa	Known RBP	5.61	□□□□□ -1.51
PDI1	YCL043C	CLF1	Q12309	687 aa	Predicted RBP	5.61	□□□□□ -1.51
PDI1	YCL043C	PMA1	P05030	918 aa	Known RBP	5.6	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 277.1 ms